Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spg11

Gene Name Gene ID Reads Annotation
spg11 ENSDARG00000045968 542 spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]










Genes with expression patterns similar to spg11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spg11 ENSDARG00000045968 542 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
2. cables1 ENSDARG00000099395 361 2.237 - - - 0.732 - 0.746 0.759 - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
3. DEAF1 ENSDARG00000088844 380 1.791 - - - - - - 0.848 0.943 - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
4. phf3 ENSDARG00000034768 1372 1.779 - - - - - 0.845 - 0.934 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
5. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.736 - - - - - 0.792 - 0.944 - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
6. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 1.73 0.865 - - - - - 0.865 - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
7. zgc:171566 ENSDARG00000105118 340 1.693 - - - - - 0.749 - 0.944 - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
8. uros ENSDARG00000027491 1147 1.687 - - - - - 0.788 - 0.899 - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
9. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.684 - - - - - 0.757 - 0.927 - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
10. loh12cr1 loh12cr1 346 1.68 - - - - - 0.812 0.868 - -
11. cyba ENSDARG00000018283 702 1.66 - 0.790 - - - 0.870 - - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
12. CU929133.1 CU929133.1 94 1.646 - - - - - 0.718 0.928 - -
13. shda ENSDARG00000094243 929 1.637 0.707 - - - - - - 0.930 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
14. ddx42 ENSDARG00000037928 1659 1.635 - - - - - 0.729 - 0.906 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
15. wdr48 wdr48 383 1.629 - - - - - 0.898 0.731 - -
16. cep19 ENSDARG00000059175 266 1.629 - 0.828 - - - - 0.801 - - centrosomal protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-81]
17. MUM1L1 MUM1L1 968 1.628 - 0.784 - - - - 0.844 - -
18. zgc:113054 ENSDARG00000053483 1079 1.628 0.755 - - - - - - 0.873 - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
19. hectd3 ENSDARG00000038905 1170 1.628 - 0.714 - - - - - 0.914 - HECT domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-031118-179]
20. adamtsl7 ENSDARG00000055439 575 1.622 0.777 - - - - - 0.845 - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
21. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.617 - - - - - 0.796 0.821 - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
22. SB:CB827 SB:CB827 245 1.616 - - - - - 0.737 0.879 - -
23. st8sia4 ENSDARG00000103600 198 1.597 - - - - - 0.743 0.854 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-10]
24. si:ch211-212g7.6 ENSDARG00000079369 707 1.594 0.744 - - - - 0.850 - - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
25. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 1.593 - - - - - 0.743 0.850 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
26. angptl5 ENSDARG00000056630 203 1.593 - - - - - 0.743 0.850 - - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
27. EPHB3 2215 1.582 - 0.880 - - - 0.702 - - - EPH receptor B3
28. yipf5 ENSDARG00000007279 2334 1.581 - - - - - 0.701 0.880 - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
29. pde7a ENSDARG00000045305 545 1.581 0.747 - - - - - 0.834 - - phosphodiesterase 7A [Source:ZFIN;Acc:ZDB-GENE-031222-10]
30. slc44a5b ENSDARG00000057419 534 1.58 - 0.811 - - - 0.769 - - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
31. vsig8b ENSDARG00000013685 246 1.579 - 0.761 - - - - 0.818 - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
32. doc2d ENSDARG00000079962 76 1.569 - - - - - 0.781 0.788 - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
33. sas sas 1783 1.568 - - - - - 0.750 0.818 - -
34. junba ENSDARG00000074378 301 1.557 - 0.742 - - - - 0.815 - - JunB proto-oncogene, AP-1 transcription factor subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2172]
35. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.55 - - - - - 0.747 0.803 - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
36. MKL2_1 MKL2_1 292 1.538 0.766 - - - - - 0.772 - -
37. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 1.537 0.749 - - - - - 0.788 - - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
38. yipf2 ENSDARG00000021399 702 1.535 0.795 0.740 - - - - - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
39. gnsa ENSDARG00000023766 545 1.523 0.781 - - - - 0.742 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
40. parp6a ENSDARG00000042703 112 1.521 - - - - - 0.749 0.772 - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
41. inhbaa ENSDARG00000012671 207 1.506 0.757 - - - - - 0.749 - - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
42. pdk2 pdk2 32 1.493 0.770 - - - - 0.723 - - -
43. CABZ01049057.1 CABZ01049057.1 479 1.492 - - - - - 0.702 0.790 - -
44. rpp25l ENSDARG00000070131 492 1.491 0.767 - - - - 0.724 - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
45. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.464 - - - - - 0.745 - 0.719 - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
46. rac1 rac1 7341 1.462 - - - - - 0.708 - 0.754 -
47. usp1 ENSDARG00000056414 1816 1.447 - - - - - 0.730 0.717 - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
48. zgc:110269 ENSDARG00000012325 691 1.445 - 0.716 - - - - 0.729 - - zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
49. tmem165 ENSDARG00000034600 1174 1.439 - - - - - 0.731 0.708 - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
50. LONRF2 LONRF2 721 1.427 - - - 0.711 - 0.716 - - -
51. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 1.426 - - - - - 0.711 0.715 - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
52. bahcc1 bahcc1 1934 1.424 - 0.702 - - - - - 0.722 -
53. egfl6 ENSDARG00000045958 335 0.999 - - - - - - - 0.999 - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
54. lrrc58a ENSDARG00000076773 1269 0.985 - - - - - - - 0.985 - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
55. zgc:112263 zgc:112263 473 0.983 - - - - - - - 0.983 -
56. golgb1 ENSDARG00000061951 2023 0.978 - - - - - - - 0.978 - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
57. necap2 ENSDARG00000046002 4372 0.977 - - - - - - - 0.977 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
58. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.97 - - - - - - - 0.970 - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
59. egln1 egln1 3746 0.969 - - - - - - - 0.969 -
60. yipf3 ENSDARG00000020449 3312 0.969 - - - - - - - 0.969 - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
61. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.965 - - - - - - - 0.965 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
62. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.963 - - - - - - - 0.963 - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
63. esrp1 ENSDARG00000011245 2097 0.948 - - - - - - - 0.948 - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
64. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 0.947 - - - - - - - 0.947 - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
65. telo2 ENSDARG00000000830, ENSDARG00000111572 241 0.946 - - - - - - - 0.946 - TEL2, telomere maintenance 2, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061103-523]
66. WIPI1 ENSDARG00000040657 138 0.946 - - - - - - - 0.946 - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
67. zgc:113278 ENSDARG00000037813 525 0.946 - - - - - - - 0.946 - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
68. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 0.946 - - - - - - - 0.946 - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
69. si:dkey-287g12.6 ENSDARG00000096808 271 0.946 - - - - - - - 0.946 - si:dkey-287g12.6 [Source:ZFIN;Acc:ZDB-GENE-130603-36]
70. cyp2k19 ENSDARG00000101861 129 0.946 - - - - - - - 0.946 - cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
71. GNAL ENSDARG00000045415 568 0.946 - - - - - - - 0.946 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
72. GPR82 GPR82 127 0.946 - - - - - - - 0.946 -
73. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 0.945 - - - - - - - 0.945 - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
74. wdr65 wdr65 251 0.945 - - - - - - - 0.945 -
75. ap4b1 ENSDARG00000013726 382 0.945 - - - - - - - 0.945 - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
76. dlx2a ENSDARG00000079964 1253 0.945 - - - - - - - 0.945 - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
77. CU367845.1 CU367845.1 215 0.945 - - - - - - - 0.945 -
78. CR407704.1 CR407704.1 188 0.945 - - - - - - - 0.945 -
79. ilvbl ENSDARG00000017126 356 0.945 - - - - - - - 0.945 - ilvB (bacterial acetolactate synthase)-like [Source:ZFIN;Acc:ZDB-GENE-040426-1623]
80. icmt ENSDARG00000020241, ENSDARG00000110063 598 0.943 - - - - - - - 0.943 - isoprenylcysteine carboxyl methyltransferase [Source:ZFIN;Acc:ZDB-GENE-050417-90]
81. si:dkeyp-117h8.4 ENSDARG00000043004 457 0.943 - - - - - - - 0.943 - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
82. grnb ENSDARG00000025081 716 0.943 - - - - - - - 0.943 - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
83. sod2 ENSDARG00000042644 1382 0.943 - - - - - - - 0.943 - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
84. mgat1b ENSDARG00000036065 996 0.943 - - - - - - - 0.943 - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
85. wdfy4 ENSDARG00000077009 802 0.943 - - - - - - - 0.943 - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
86. nf2b ENSDARG00000025567 1441 0.943 - - - - - - - 0.943 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
87. hsf5 ENSDARG00000104686 9 0.942 - - - - - - 0.942 - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
88. anks1b ENSDARG00000003512 847 0.942 - - - - - - - 0.942 - ankyrin repeat and sterile alpha motif domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-041210-349]
89. pho ENSDARG00000035133 670 0.941 - - - - - - - 0.941 - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
90. larp4b ENSDARG00000062146 1601 0.941 - - - - - - - 0.941 - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
91. dis3l ENSDARG00000053200, ENSDARG00000112358 267 0.941 - - - - - - 0.941 - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
92. slc1a7a ENSDARG00000034940 149 0.94 - - - - - - 0.940 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
93. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 0.94 - - - - - - - 0.940 - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
94. nudt22 ENSDARG00000071671 411 0.94 - - - - - - - 0.940 - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
95. mlf1 ENSDARG00000077301 789 0.94 - - - - - - - 0.940 - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
96. CABZ01052953.1 CABZ01052953.1 146 0.94 - - - - - - - 0.940 -
97. si:ch73-138e16.8 175 0.939 - - - - - - 0.939 - - si:ch73-138e16.8
98. NCOA7 NCOA7 658 0.939 - - - - - - - 0.939 -
99. si:ch211-120p12.3 1079 0.938 - - - - - - - 0.938 - si:ch211-120p12.3, transcript variant X2
100. tmem104 ENSDARG00000088560 859 0.938 - - - - - - - 0.938 - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]

There are 1469 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA