Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for specc1lb

Gene Name Gene ID Reads Annotation
specc1lb ENSDARG00000042232 640 sperm antigen with calponin homology and coiled-coil domains 1-like b [Source:ZFIN;Acc:ZDB-GENE-090423-1]










Genes with expression patterns similar to specc1lb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. specc1lb ENSDARG00000042232 640 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sperm antigen with calponin homology and coiled-coil domains 1-like b [Source:ZFIN;Acc:ZDB-GENE-090423-1]
2. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 1.649 0.798 - - - - 0.851 - - - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
3. si:dkey-15h8.15 ENSDARG00000102601 335 1.592 - - - - - 0.854 0.738 - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
4. PBXIP1 PBXIP1 602 1.564 - 0.837 - - - - 0.727 - -
5. hexa ENSDARG00000052113, ENSDARG00000111134 228 1.551 - 0.796 - - - - 0.755 - - hexosaminidase A (alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-050417-283]
6. fynrk 527 1.548 - 0.798 - - - 0.750 - - - fyn-related Src family tyrosine kinase
7. cnot8 ENSDARG00000020043 866 1.54 - 0.835 - - - - 0.705 - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
8. ypel5 ENSDARG00000088929 1011 1.525 - 0.752 - - - 0.773 - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
9. rnf8 ENSDARG00000044949 751 1.499 - - - - - 0.758 0.741 - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
10. plk3 ENSDARG00000038754 1687 1.495 - 0.793 - - - - 0.702 - - polo-like kinase 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6134]
11. kazald2 ENSDARG00000078518 3062 1.479 0.723 - - - - 0.756 - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
12. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.478 - - - - - 0.749 0.729 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
13. bcmo1a bcmo1a 402 1.46 - 0.712 - - - - 0.748 - -
14. znf366 ENSDARG00000040116 168 1.451 - 0.720 - - - - 0.731 - - zinc finger protein 366 [Source:ZFIN;Acc:ZDB-GENE-110408-46]
15. BX323045.3 BX323045.3 1044 1.444 - 0.713 - - - - 0.731 - -
16. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.434 - 0.719 - 0.715 - - - - - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
17. SHROOM3 ENSDARG00000102180 419 1.434 0.707 - - - - - 0.727 - - shroom family member 3 [Source:ZFIN;Acc:ZDB-GENE-120817-1]
18. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.931 - 0.931 - - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
19. KAZN KAZN 58 0.883 - - - - - 0.883 - - -
20. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.881 - - - - - 0.881 - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
21. amfr 774 0.868 - 0.868 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
22. syt8 syt8 82 0.868 - - - - - 0.868 - - -
23. si:ch73-131e21.5 si:ch73-131e21.5 1895 0.866 - 0.866 - - - - - - -
24. hiat1b ENSDARG00000043055 757 0.865 - 0.865 - - - - - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
25. htt ENSDARG00000052866 844 0.862 - 0.862 - - - - - - - huntingtin [Source:ZFIN;Acc:ZDB-GENE-990415-131]
26. ttc14 ENSDARG00000013845 1192 0.86 - - - - - - 0.860 - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
27. si:ch73-22b20.4 si:ch73-22b20.4 283 0.859 - - - - - - 0.859 - -
28. exoc7 ENSDARG00000087229 987 0.855 - 0.855 - - - - - - - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
29. lgmn ENSDARG00000039150 2788 0.855 - 0.855 - - - - - - - legumain [Source:ZFIN;Acc:ZDB-GENE-021030-1]
30. SLC27A2_1 SLC27A2_1 974 0.854 - 0.854 - - - - - - -
31. BX510999.1 BX510999.1 412 0.854 - 0.854 - - - - - - -
32. trnt1 ENSDARG00000075297, ENSDARG00000116975 366 0.847 - 0.847 - - - - - - - tRNA nucleotidyl transferase, CCA-adding, 1 [Source:ZFIN;Acc:ZDB-GENE-040625-176]
33. AIM1L AIM1L 899 0.845 - 0.845 - - - - - - -
34. GATC ENSDARG00000056855 551 0.844 - - - - - - 0.844 - - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
35. med22 ENSDARG00000014148 1307 0.843 - - - - - - 0.843 - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
36. tinf2 ENSDARG00000054473 391 0.839 - - - - - - 0.839 - - TERF1 (TRF1)-interacting nuclear factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6168]
37. slc39a6 ENSDARG00000068143 1039 0.838 - 0.838 - - - - - - - solute carrier family 39 (zinc transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3023]
38. PLEKHG3 72 0.837 - 0.837 - - - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
39. cant1a ENSDARG00000012192 1324 0.834 - 0.834 - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
40. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.834 - 0.834 - - - - - - - coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
41. hira ENSDARG00000013434 2204 0.834 - - - - - - 0.834 - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
42. F8A3 F8A3 646 0.832 - - - - - - 0.832 - -
43. dpp3 ENSDARG00000020676 2393 0.83 - 0.830 - - - - - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
44. CCDC64B CCDC64B 337 0.829 - 0.829 - - - - - - -
45. arl14ep ENSDARG00000001210 3029 0.829 - 0.829 - - - - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
46. sqrdl 1598 0.828 - 0.828 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
47. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 0.827 - 0.827 - - - - - - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
48. pafah1b1a ENSDARG00000032013 3183 0.826 0.826 - - - - - - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
49. nudcd1 ENSDARG00000036158 608 0.824 - 0.824 - - - - - - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
50. lats1 ENSDARG00000003751 448 0.822 - - - - - - 0.822 - - large tumor suppressor kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050523-2]
51. emc7 ENSDARG00000012144 1608 0.822 - - - - - - 0.822 - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
52. apc ENSDARG00000058868 2605 0.821 - - - - - - 0.821 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
53. hmgcl ENSDARG00000021220 2468 0.82 - 0.820 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
54. si:dkey-188i13.11 ENSDARG00000092895 548 0.82 - 0.820 - - - - - - - si:dkey-188i13.11 [Source:ZFIN;Acc:ZDB-GENE-090313-209]
55. pex11a ENSDARG00000060707, ENSDARG00000111994 101 0.82 - - - - - - 0.820 - - peroxisomal biogenesis factor 11 alpha [Source:ZFIN;Acc:ZDB-GENE-050419-121]
56. st14b ENSDARG00000044655 415 0.82 - 0.820 - - - - - - - suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
57. cdca5 ENSDARG00000044437 2041 0.819 - - - - - - 0.819 - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
58. NAIF1_1 NAIF1_1 1336 0.819 - - - - - 0.819 - - -
59. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 0.819 - - - - - 0.819 - - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
60. sh3gl3b ENSDARG00000007302 573 0.817 - 0.817 - - - - - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
61. TANC2 TANC2 1104 0.817 - 0.817 - - - - - - -
62. abhd14b ENSDARG00000100531 333 0.816 - 0.816 - - - - - - - abhydrolase domain containing 14B [Source:ZFIN;Acc:ZDB-GENE-040426-1342]
63. ercc2 ENSDARG00000021985 678 0.814 - - - - - - 0.814 - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
64. fgfbp1 fgfbp1 445 0.813 - - - - - - 0.813 - -
65. phlda1 ENSDARG00000099129 711 0.813 - 0.813 - - - - - - - pleckstrin homology-like domain, family A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041010-103]
66. prr15la ENSDARG00000025615 77 0.812 - 0.812 - - - - - - - proline rich 15-like a [Source:ZFIN;Acc:ZDB-GENE-040801-218]
67. wnt7aa ENSDARG00000044827 645 0.812 - - - - - - 0.812 - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
68. PATZ1 ENSDARG00000076584 1116 0.812 - 0.812 - - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
69. frmd8 ENSDARG00000073696 2661 0.812 - 0.812 - - - - - - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
70. oxnad1 ENSDARG00000062664 2684 0.812 - 0.812 - - - - - - - oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
71. dlx4a ENSDARG00000011956 882 0.812 - - - - - 0.812 - - - distal-less homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-980526-73]
72. atg5 ENSDARG00000023396 1726 0.812 - - - - - - 0.812 - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
73. ECI2 ENSDARG00000102412 848 0.811 - - - - - - 0.811 - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
74. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.811 - - - - - - 0.811 - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
75. dnajb11 ENSDARG00000015088 1404 0.81 - 0.810 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 11 [Source:ZFIN;Acc:ZDB-GENE-031113-9]
76. zgc:162200 ENSDARG00000079934 1225 0.809 - - - - - 0.809 - - - zgc:162200 [Source:ZFIN;Acc:ZDB-GENE-030131-2989]
77. rras ENSDARG00000006553 1665 0.808 - 0.808 - - - - - - - RAS related [Source:ZFIN;Acc:ZDB-GENE-041010-217]
78. mob1ba ENSDARG00000009169 1019 0.808 - 0.808 - - - - - - - MOB kinase activator 1Ba [Source:ZFIN;Acc:ZDB-GENE-040426-919]
79. triobp triobp 455 0.808 - 0.808 - - - - - - -
80. COMMD6 ENSDARG00000074204 310 0.807 - 0.807 - - - - - - - COMM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-070912-209]
81. MAD2L2_1 MAD2L2_1 705 0.807 - 0.807 - - - - - - -
82. BX465203.3 BX465203.3 178 0.806 - 0.806 - - - - - - -
83. RELL1 ENSDARG00000018312 579 0.806 - - - - - - 0.806 - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
84. afmid ENSDARG00000099106 166 0.806 - 0.806 - - - - - - - arylformamidase [Source:ZFIN;Acc:ZDB-GENE-050417-166]
85. nkap ENSDARG00000033450, ENSDARG00000116152 1929 0.806 - - - - - - 0.806 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
86. zbtb8b ENSDARG00000035889 680 0.805 - 0.805 - - - - - - - zinc finger and BTB domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-050417-42]
87. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 0.801 - 0.801 - - - - - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
88. LMCD1 ENSDARG00000002002 298 0.801 - - - - - 0.801 - - - LIM and cysteine-rich domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1067]
89. si:dkey-98p3.7 si:dkey-98p3.7 147 0.801 - - - - - - 0.801 - -
90. zcrb1 ENSDARG00000045691 1741 0.801 - 0.801 - - - - - - - zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
91. triap1 ENSDARG00000014963 646 0.801 - 0.801 - - - - - - - TP53 regulated inhibitor of apoptosis 1 [Source:ZFIN;Acc:ZDB-GENE-050417-161]
92. rasgrp4 ENSDARG00000061796 134 0.801 0.801 - - - - - - - - RAS guanyl releasing protein 4 [Source:ZFIN;Acc:ZDB-GENE-050419-110]
93. gstal gstal 1865 0.8 - 0.800 - - - - - - -
94. CABZ01003022.1 CABZ01003022.1 507 0.799 - - - - - - 0.799 - -
95. rnf170 ENSDARG00000104069 838 0.799 - 0.799 - - - - - - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
96. ypel3 ENSDARG00000055510 1344 0.799 - - - - - - 0.799 - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
97. GSG2 GSG2 1162 0.798 - 0.798 - - - - - - -
98. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.797 - 0.797 - - - - - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
99. slc47a1 ENSDARG00000046012 1426 0.797 - 0.797 - - - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
100. il6st ENSDARG00000104693 55 0.796 - 0.796 - - - - - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]

There are 379 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA