Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spdya

Gene Name Gene ID Reads Annotation
spdya ENSDARG00000059131 33 speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]










Genes with expression patterns similar to spdya

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spdya ENSDARG00000059131 33 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
2. lss ENSDARG00000061274 68 1.832 - - - - - 0.883 0.949 - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
3. ZBED1_3 ZBED1_3 7 1.815 0.830 - - - - - - - 0.985
4. zgc:172014 ENSDARG00000101775 3 1.808 - - - - - - 0.823 - 0.985 zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
5. ZNF648 ENSDARG00000104823 194 1.806 - - - - - 0.983 0.823 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
6. si:ch73-381a20.2 si:ch73-381a20.2 11 1.797 0.812 - - - - - - - 0.985
7. PIGG PIGG 106 1.758 0.954 - - - - 0.804 - - -
8. prodha ENSDARG00000086746 10 1.74 - - 0.869 - - - - - 0.871 proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
9. FAM132B FAM132B 39 1.705 0.714 - - - - 0.991 - - -
10. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1.694 - - - - - 0.871 0.823 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
11. map3k4 ENSDARG00000104835 34 1.67 0.830 - 0.840 - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
12. c1qtnf5 ENSDARG00000056134 729 1.667 - - 0.844 - - - 0.823 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
13. ANGEL1 ENSDARG00000077567 38 1.664 - - 0.891 - - - - - 0.773 angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
14. si:ch211-212o2.6 si:ch211-212o2.6 61 1.663 - - - - - 0.891 0.772 - -
15. clrn1 ENSDARG00000102890 5 1.661 - - - - - - 0.823 - 0.838 clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
16. BX005423.3 BX005423.3 33 1.656 - - - - - 0.889 - - 0.767
17. CABZ01112732.1 ENSDARG00000068453 4 1.653 0.830 - - - - - 0.823 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
18. BX324198.1 BX324198.1 12 1.653 0.830 - - - - - 0.823 - -
19. si:ch211-11i5.3 si:ch211-11i5.3 7 1.653 0.830 - - - - - 0.823 - -
20. SNORD52 SNORD52 23 1.653 0.830 - - - - - 0.823 - -
21. slc24a1 ENSDARG00000041431 33 1.65 - - 0.777 - - - 0.873 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
22. b3gnt3.4 ENSDARG00000058100 117 1.649 - - - - - 0.853 0.796 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
23. rtel1 ENSDARG00000035074 17 1.631 - - - - 0.755 - - - 0.876 regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
24. zgc:66484 ENSDARG00000030478 167 1.629 0.806 - - - - - 0.823 - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
25. si:ch211-202m22.1 ENSDARG00000094491 24 1.602 - - - 0.779 - - 0.823 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
26. si:dkey-102m7.3 ENSDARG00000100366 27 1.595 0.772 - - - - - 0.823 - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
27. atad1b ENSDARG00000056609 40 1.594 0.830 - - - - - 0.764 - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
28. ccdc33 ENSDARG00000051858 11 1.56 0.830 - - - - - - 0.730 - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
29. PEG3_41 PEG3_41 124 1.554 0.772 - 0.782 - - - - - -
30. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.517 - - - - 0.768 - 0.749 - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
31. spire1a ENSDARG00000035868, ENSDARG00000109651 185 1.495 - - 0.729 - - 0.766 - - - spire-type actin nucleation factor 1a [Source:ZFIN;Acc:ZDB-GENE-061013-119]
32. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.43 0.705 - - - - - 0.725 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
33. si:ch211-119d14.3 ENSDARG00000075332 12 1 1.000 - - - - - - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
34. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
35. SYTL1 ENSDARG00000070094 282 1 - - - - - 1.000 - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
36. si:ch73-367f21.6 ENSDARG00000089953 46 0.993 - - - - - 0.993 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
37. si:dkey-150k17.3 33 0.993 - - - - - 0.993 - - - si:dkey-150k17.3
38. si:ch211-219f7.3 si:ch211-219f7.3 48 0.993 - - - - - 0.993 - - -
39. oaz2b ENSDARG00000059815 38 0.993 - - - - - 0.993 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
40. CR376787.3 CR376787.3 11 0.987 - - - - - - - - 0.987
41. si:dkey-56m15.6 ENSDARG00000093461 1 0.987 - - - - - - - - 0.987 si:dkey-56m15.6 [Source:ZFIN;Acc:ZDB-GENE-110914-102]
42. CABZ01044048.1 ENSDARG00000011463 20 0.987 - - - - - - - - 0.987 coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
43. si:ch211-15j21.2 si:ch211-15j21.2 13 0.987 - - - - - - - - 0.987
44. si:ch211-267j24.2 si:ch211-267j24.2 7 0.987 - - - - - - - - 0.987
45. SNTG1 ENSDARG00000061832 0 0.985 - - - - - - - - 0.985 syntrophin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-140106-77]
46. SNORA63_1 SNORA63_1 7 0.985 - - - - - - - - 0.985
47. ETS1 ENSDARG00000024431 6 0.985 - - - - - - - - 0.985 v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
48. cyp2k19 ENSDARG00000101861 129 0.985 - - - - - - - - 0.985 cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
49. zgc:112994 ENSDARG00000026296 5 0.985 - - - - - - - - 0.985 zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
50. TPPP ENSDARG00000105029 0 0.985 - - - - - - - - 0.985 tubulin polymerization promoting protein [Source:HGNC Symbol;Acc:HGNC:24164]
51. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 0.985 - - - - - - - - 0.985 discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
52. CR388002.2 CR388002.2 3 0.985 - - - - - - - - 0.985
53. pde3a ENSDARG00000004227 6 0.985 - - - - - - - - 0.985 phosphodiesterase 3A, cGMP-inhibited [Source:ZFIN;Acc:ZDB-GENE-041210-23]
54. lrrc10 ENSDARG00000045612 3 0.985 - - - - - - - - 0.985 leucine rich repeat containing 10 [Source:ZFIN;Acc:ZDB-GENE-071119-6]
55. si:ch211-211i20.1 si:ch211-211i20.1 29 0.985 - - - - - - - - 0.985
56. si:ch211-264e16.2 ENSDARG00000094415 4 0.985 - - - - - - - - 0.985 si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
57. si:ch211-155i14.1 si:ch211-155i14.1 1 0.985 - - - - - - - - 0.985
58. si:ch211-196n4.9 si:ch211-196n4.9 1 0.985 - - - - - - - - 0.985
59. THBS1 THBS1 6 0.985 - - - - - - - - 0.985
60. fgf10b ENSDARG00000100475 17 0.985 - - - - - - - - 0.985 fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
61. v2rh14 ENSDARG00000068520, ENSDARG00000116571 3 0.985 - - - - - - - - 0.985 vomeronasal 2 receptor, h14 [Source:ZFIN;Acc:ZDB-GENE-050419-221]
62. slc22a7b slc22a7b 11 0.985 - - - - - - - - 0.985
63. CABZ01071909.1 ENSDARG00000117524 2 0.985 - - - - - - - - 0.985
64. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.985 - - - - - - - - 0.985 intelectin 2 [Source:NCBI gene;Acc:100007792]
65. si:ch211-287c22.2 si:ch211-287c22.2 1 0.985 - - - - - - - - 0.985
66. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 0.985 - - - - - - - - 0.985 vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
67. zgc:158464 ENSDARG00000100342 18 0.985 - - - - - - - - 0.985 zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
68. MPZL2 MPZL2 31 0.985 - - - - - - - - 0.985
69. CABZ01073069.1 CABZ01073069.1 5 0.985 - - - - - - - - 0.985
70. rxfp3 ENSDARG00000057410, ENSDARG00000110516 1 0.985 - - - - - - - - 0.985 relaxin family peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-080723-67]
71. gzmk ENSDARG00000028780 1 0.985 - - - - - - - - 0.985 granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
72. cyp39a1 ENSDARG00000017982 4 0.985 - - - - - - - - 0.985 cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
73. zgc:171516 zgc:171516 5 0.985 - - - - - - - - 0.985
74. CABZ01079015.1 CABZ01079015.1 10 0.985 - - - - - - - - 0.985
75. zgc:112966 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 7 0.985 - - - - - - - - 0.985 zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
76. pex11b ENSDARG00000069147 1 0.985 - - - - - - - - 0.985 peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
77. pcdh2g16 1 0.985 - - - - - - - - 0.985 protocadherin 2 gamma 16
78. si:dkey-182i3.10 ENSDARG00000096614 2 0.985 - - - - - - - - 0.985 si:dkey-182i3.10 [Source:ZFIN;Acc:ZDB-GENE-121214-231]
79. C1S ENSDARG00000100599 20 0.985 - - - - - - - - 0.985 complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
80. spo11 ENSDARG00000013837 7 0.985 - - - - - - - - 0.985 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
81. sorl1 ENSDARG00000013892 13 0.985 - - - - - - - - 0.985 sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
82. taar19e ENSDARG00000114537 0 0.985 - - - - - - - - 0.985 trace amine associated receptor 19e [Source:ZFIN;Acc:ZDB-GENE-091116-66]
83. agxtb ENSDARG00000018478 2 0.985 - - - - - - - - 0.985 alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
84. slc26a4 ENSDARG00000069431 2 0.985 - - - - - - - - 0.985 solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
85. si:dkey-96l17.6 ENSDARG00000094540 4 0.985 - - - - - - - - 0.985 si:dkey-96l17.6 [Source:ZFIN;Acc:ZDB-GENE-060526-350]
86. NWD1 ENSDARG00000076110 3 0.985 - - - - - - - - 0.985 NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
87. celsr2l celsr2l 1 0.985 - - - - - - - - 0.985
88. si:ch211-3o3.8 si:ch211-3o3.8 2 0.985 - - - - - - - - 0.985
89. antxr2b ENSDARG00000063011, ENSDARG00000112595 1 0.985 - - - - - - - - 0.985 ANTXR cell adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080213-4]
90. si:dkey-182g1.6 ENSDARG00000055831 0 0.985 - - - - - - - - 0.985 si:dkey-182g1.6 [Source:ZFIN;Acc:ZDB-GENE-100922-82]
91. elmod3 ENSDARG00000074742 6 0.985 - - - - - - - - 0.985 ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
92. si:dkey-240n22.2 si:dkey-240n22.2 2 0.985 - - - - - - - - 0.985
93. RBBP6_2 RBBP6_2 23 0.985 - - - - - - - - 0.985
94. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.985 - - - - - - - - 0.985
95. ssh1a ENSDARG00000056780 3 0.985 - - - - - - - - 0.985 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
96. DLG4 3 0.985 - - - - - - - - 0.985 discs large MAGUK scaffold protein 4, transcript variant X5
97. si:dkey-54j5.1 si:dkey-54j5.1 4 0.985 - - - - - - - - 0.985
98. upk1a ENSDARG00000021866 9 0.985 - - - - - - - - 0.985 uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
99. Metazoa_SRP_24 Metazoa_SRP_24 4 0.985 - - - - - - - - 0.985
100. si:ch211-74m13.1 ENSDARG00000094952 0 0.985 - - - - - - - - 0.985 si:ch211-74m13.1 [Source:ZFIN;Acc:ZDB-GENE-081104-12]

There are 1087 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA