Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spcs1

Gene Name Gene ID Reads Annotation
spcs1 ENSDARG00000059298 5327 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]










Genes with expression patterns similar to spcs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spcs1 ENSDARG00000059298 5327 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
2. adam10a ENSDARG00000053468 9308 3.251 - 0.817 - - - 0.759 0.852 - 0.823 ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
3. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 2.598 - - - - 0.971 - 0.739 - 0.888 ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
4. magt1 ENSDARG00000058062 3903 2.562 - 0.829 - - - 0.903 - - 0.830 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
5. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 2.558 - 0.786 - - 0.981 0.791 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
6. pdlim1 ENSDARG00000019845 5765 2.554 - 0.858 - - 0.973 - 0.723 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
7. myeov2 3351 2.534 - 0.791 - - - 0.908 0.835 - - myeloma overexpressed 2
8. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 2.511 - - - - - 0.934 0.756 - 0.821 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
9. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 2.49 - - - - - 0.894 0.766 0.830 - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
10. slc39a7 ENSDARG00000104451 6368 2.454 - - - - - 0.948 0.745 - 0.761 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
11. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.45 - 0.733 - - 0.925 - 0.792 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
12. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.435 - - - - 0.950 0.748 0.737 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
13. zgc:113442 ENSDARG00000101906 3092 2.424 - 0.842 - - - - 0.719 - 0.863 zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
14. rer1 ENSDARG00000012747 6939 2.42 - - - - 0.971 0.731 0.718 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
15. arcn1b ENSDARG00000031214 4529 2.419 - - - - 0.979 0.704 0.736 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
16. rac2 ENSDARG00000038010 5837 2.405 - 0.799 - - - 0.876 0.730 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
17. si:ch211-11k18.4 ENSDARG00000087869 3298 2.4 - - - - - 0.898 0.765 - 0.737 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
18. gpx7 ENSDARG00000091511 3045 2.393 - - - - - 0.887 0.720 - 0.786 glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
19. CABZ01013938.1 CABZ01013938.1 4497 2.391 - 0.711 - - 0.936 - 0.744 - -
20. lsm14aa ENSDARG00000006600 2298 2.356 - 0.790 - - - 0.801 0.765 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
21. tln1 ENSDARG00000100729 5744 2.324 - 0.704 - - - 0.798 - - 0.822 talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
22. vps25 ENSDARG00000059079 3747 2.304 - - 0.704 - - 0.747 0.853 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
23. padi2 ENSDARG00000044167 6765 2.276 - - 0.716 - - - 0.807 - 0.753 peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
24. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 2.274 - - - - - 0.756 0.770 0.748 - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
25. fryl ENSDARG00000040001 3256 2.257 - - - - - 0.772 0.751 - 0.734 furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
26. arf1 ENSDARG00000009484 5034 2.25 - 0.711 - - - 0.772 0.767 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
27. zgc:56530 zgc:56530 6300 2.248 - - - - - 0.815 0.710 0.723 -
28. C6H2orf40 C6H2orf40 4224 1.876 - - - - 0.982 0.894 - - -
29. CABZ01055343.2 CABZ01055343.2 10312 1.856 - - - - 0.980 0.876 - - -
30. ttc13 ENSDARG00000063242 1360 1.835 - - - - 0.983 - 0.852 - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
31. mafk ENSDARG00000100947 1460 1.831 - - - - 0.981 0.850 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
32. vps29 ENSDARG00000069521 5599 1.823 - - - - 0.966 - - - 0.857 vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
33. CABZ01027552.1 CABZ01027552.1 760 1.813 - - - - 0.981 0.832 - - -
34. ticrr ENSDARG00000045605 739 1.799 - - - - 0.982 0.817 - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
35. arfgef2 ENSDARG00000074702 1593 1.792 - - - - 0.977 - - - 0.815 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
36. actn1 ENSDARG00000007219 2919 1.788 - - - - - 0.859 - - 0.929 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
37. sh3bgrl3 ENSDARG00000098075 3071 1.778 - - - - 0.978 - - - 0.800 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
38. s100v1 ENSDARG00000070427 6633 1.751 - - - - - 0.879 - - 0.872 S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
39. sf3b3_1 ENSDARG00000103553 1191 1.75 - 0.767 - - 0.983 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
40. clasp1a ENSDARG00000010280 1158 1.732 - - - - 0.982 - 0.750 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
41. sertad2b ENSDARG00000055530 785 1.724 - - - - - 0.921 - - 0.803 SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
42. nsfl1c ENSDARG00000087640 2226 1.72 - 0.741 - - 0.979 - - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
43. CABZ01092303.1 CABZ01092303.1 8825 1.717 - - - - 0.881 - 0.836 - -
44. gpm6ab ENSDARG00000004621 5825 1.713 - 0.741 - - 0.972 - - - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
45. prkar1aa ENSDARG00000076128 6565 1.712 - - - - - 0.833 0.879 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
46. tra2a ENSDARG00000007863 4449 1.712 - - - - 0.975 - 0.737 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
47. C2CD2 ENSDARG00000105000 2573 1.71 - - - - - 0.873 - - 0.837 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
48. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.708 - - - - 0.982 - 0.726 - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
49. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.707 - - - - 0.973 - 0.734 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
50. tet3 ENSDARG00000062646 6672 1.706 - - - - - 0.915 0.791 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
51. sf1 ENSDARG00000008188 5142 1.704 - - - - 0.954 - 0.750 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
52. nufip2 ENSDARG00000069066 3965 1.704 - - - - - 0.865 0.839 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
53. arf6b ENSDARG00000052928 4585 1.703 - 0.721 - - 0.982 - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
54. zgc:56493 ENSDARG00000031435 33407 1.684 - - - - - 0.888 0.796 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
55. ostc ENSDARG00000104901 16240 1.684 - - - - - 0.876 - - 0.808 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
56. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.681 - 0.757 - - - 0.924 - - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
57. rhot2 ENSDARG00000056328 1123 1.676 - - - - - 0.835 - - 0.841 ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
58. srm ENSDARG00000055760 6572 1.676 - - 0.701 - 0.975 - - - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
59. cbx5 ENSDARG00000061187 24026 1.673 - - - - 0.826 - 0.847 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
60. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.672 - - - - - - 0.809 - 0.863 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
61. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.669 - 0.761 - - - 0.908 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
62. klhl11 ENSDARG00000045130 800 1.662 - - - - - 0.801 - - 0.861 kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
63. hnrnpk ENSDARG00000018914 8841 1.66 - - - - 0.917 - 0.743 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
64. ajuba ENSDARG00000077842 1152 1.658 - - - - - 0.805 - - 0.853 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
65. KDM6B KDM6B 10265 1.658 - - - - 0.898 - 0.760 - -
66. psmd8 ENSDARG00000020454 6645 1.656 - 0.752 - - - 0.904 - - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
67. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.655 - - - - - 0.880 0.775 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
68. znf185 ENSDARG00000103917 7195 1.65 - - - - - 0.924 - - 0.726 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
69. adam17a ENSDARG00000043213 1305 1.649 - - - - - 0.873 0.776 - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
70. rrbp1a ENSDARG00000013763 4723 1.649 - - - - - 0.827 0.822 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
71. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.649 - - - - - - 0.771 - 0.878 golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
72. ywhabb ENSDARG00000075758 23104 1.648 - - - - - - 0.815 - 0.833 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
73. pvrl1b 1645 1.646 - - - - - 0.908 0.738 - - poliovirus receptor-related 1b
74. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.642 - - - - - 0.884 0.758 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
75. actr2a ENSDARG00000052438 5838 1.641 - - - - - 0.871 - - 0.770 ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
76. ppig ENSDARG00000044431 3427 1.641 - - - - - 0.837 0.804 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
77. smg7 ENSDARG00000060767 2759 1.638 - - - - - 0.906 0.732 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
78. AGAP3 ENSDARG00000087822 4128 1.638 - - - - - 0.809 0.829 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
79. tmem50a ENSDARG00000015757 3244 1.634 - - - - - 0.919 0.715 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
80. tacc3 ENSDARG00000005454 2305 1.631 - - - - - 0.857 0.774 - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
81. bcar1 ENSDARG00000056525 6563 1.629 - - - - - 0.890 0.739 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
82. tmem18 ENSDARG00000036704 1784 1.628 - - - - - 0.897 0.731 - - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
83. arcn1a ENSDARG00000002792 2847 1.627 - - - - - - 0.801 - 0.826 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
84. lamb4 ENSDARG00000039133 1220 1.627 - 0.755 - - - 0.872 - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
85. dnaja2 ENSDARG00000104066 11946 1.627 - - - - 0.742 0.885 - - - DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
86. cldnb ENSDARG00000009544 6036 1.627 - - - - - 0.862 0.765 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
87. SIK1 ENSDARG00000058606 1982 1.625 - - - - - 0.847 - - 0.778 salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
88. vimp 4034 1.623 - - - - - 0.871 0.752 - - VCP-interacting membrane selenoprotein
89. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.622 - 0.838 - - - 0.784 - - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
90. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.622 - - - - - 0.779 - - 0.843 transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
91. SH3D21 ENSDARG00000099448 1726 1.621 - - - - - 0.879 0.742 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
92. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.62 - 0.722 - - - - - - 0.898 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
93. gale ENSDARG00000002401 5489 1.613 - - - - - 0.864 0.749 - - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
94. efhd2 ENSDARG00000055759 7777 1.612 - 0.825 - - - - - - 0.787 EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
95. arpc1a ENSDARG00000008383 7353 1.611 - - - - - 0.780 0.831 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
96. nos2b ENSDARG00000031976 935 1.61 - - - - - 0.860 0.750 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
97. map3k3 ENSDARG00000060348 1482 1.608 - - - - - - 0.772 - 0.836 mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
98. emc3 ENSDARG00000020607 3406 1.608 - - - - - 0.762 0.846 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
99. CU633744.1 CU633744.1 2074 1.608 - 0.790 - - - - 0.818 - -
100. wls ENSDARG00000009534 8719 1.607 - - - - 0.822 - 0.785 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]

There are 1683 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA