Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spaw

Gene Name Gene ID Reads Annotation
spaw ENSDARG00000014309 4 southpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]










Genes with expression patterns similar to spaw

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRTM1 ENSDARG00000098742 21 1 - - 1.000 - - - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
2. serpinb1l2 ENSDARG00000070396 37 1 - - 1.000 - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
3. spaw ENSDARG00000014309 4 1 - - 1.000 - - - - - - southpaw [Source:ZFIN;Acc:ZDB-GENE-030219-1]
4. dnah1 ENSDARG00000100115 17 1 - - 1.000 - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
5. si:ch211-218o21.4 ENSDARG00000079869 4 1 - - 1.000 - - - - - - si:ch211-218o21.4 [Source:ZFIN;Acc:ZDB-GENE-081104-178]
6. grapb ENSDARG00000022668 6 1 - - 1.000 - - - - - - GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
7. cyp2ae1 ENSDARG00000013524 14 1 - - 1.000 - - - - - - cytochrome P450, family 2, subfamily AE, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-090312-107]
8. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 1 - - 1.000 - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
9. si:ch211-152n14.4 si:ch211-152n14.4 4 1 - - 1.000 - - - - - -
10. si:ch211-105d18.8 si:ch211-105d18.8 38 0.999 - - 0.999 - - - - - -
11. CLEC17A CLEC17A 42 0.998 - - 0.998 - - - - - -
12. ROCK2 ROCK2 8 0.998 - - 0.998 - - - - - -
13. CABZ01113374.2 CABZ01113374.2 27 0.996 - - 0.996 - - - - - -
14. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.995 - - 0.995 - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
15. npy ENSDARG00000036222 14 0.995 - - 0.995 - - - - - - neuropeptide Y [Source:ZFIN;Acc:ZDB-GENE-980526-438]
16. prodha ENSDARG00000086746 10 0.995 - - 0.995 - - - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
17. fam26f 595 0.994 - - 0.994 - - - - - - family with sequence similarity 26, member F
18. CABZ01041804.1 CABZ01041804.1 312 0.993 - - 0.993 - - - - - -
19. PEG3_35 PEG3_35 52 0.991 - - 0.991 - - - - - -
20. GTF3A GTF3A 6 0.99 - - 0.990 - - - - - -
21. si:ch211-254n4.1 si:ch211-254n4.1 36 0.99 - - 0.990 - - - - - -
22. polm ENSDARG00000103470 49 0.985 - - 0.985 - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
23. matn1 ENSDARG00000030215 11 0.985 - - 0.985 - - - - - - matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
24. si:dkey-29b11.3 ENSDARG00000087388 29 0.979 - - 0.979 - - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
25. zgc:162184 ENSDARG00000077217 47 0.974 - - 0.974 - - - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
26. sf3b3 ENSDARG00000103553 57 0.973 - - 0.973 - - - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
27. FP074874.1 ENSDARG00000102679 40 0.971 - - 0.971 - - - - - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
28. c1qtnf5 ENSDARG00000056134 729 0.969 - - 0.969 - - - - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
29. GLIPR1 GLIPR1 37 0.965 - - 0.965 - - - - - -
30. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 0.965 - - 0.965 - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
31. map3k4 ENSDARG00000104835 34 0.962 - - 0.962 - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
32. zgc:165481 ENSDARG00000060092 95 0.962 - - 0.962 - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
33. rnf41l ENSDARG00000073918 329 0.961 - - 0.961 - - - - - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
34. lrch4 ENSDARG00000068258 24 0.961 - - 0.961 - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
35. ubxn10 ENSDARG00000052535 24 0.958 - - 0.958 - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
36. vps13d ENSDARG00000017986 183 0.943 - - 0.943 - - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
37. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 0.942 - - 0.942 - - - - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
38. C11H3orf14 C11H3orf14 15 0.938 - - 0.938 - - - - - -
39. ENSDARG00000091642 ENSDARG00000091642 14 0.935 - - 0.935 - - - - - -
40. si:dkeyp-4f2.2 si:dkeyp-4f2.2 53 0.933 - - 0.933 - - - - - -
41. shank3b ENSDARG00000063054 148 0.932 - - 0.932 - - - - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
42. st6galnac5a ENSDARG00000039220 76 0.927 - - 0.927 - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
43. si:ch1073-296i8.2 ENSDARG00000093773 36 0.926 - - 0.926 - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
44. mmp13b ENSDARG00000100794 38 0.925 - - 0.925 - - - - - - matrix metallopeptidase 13b [Source:ZFIN;Acc:ZDB-GENE-030131-6152]
45. si:ch211-222k6.2 ENSDARG00000087046 144 0.925 - - 0.925 - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
46. si:ch211-145h19.1 31 0.922 - - 0.922 - - - - - - si:ch211-145h19.1
47. CR538726.1 ENSDARG00000097179 321 0.915 - - 0.915 - - - - - -
48. BX511006.2 BX511006.2 29 0.911 - - 0.911 - - - - - -
49. BX004890.2 BX004890.2 84 0.91 - - 0.910 - - - - - -
50. pex16 ENSDARG00000058202 486 0.909 - - 0.909 - - - - - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
51. atp2b1b ENSDARG00000007788 56 0.907 - - 0.907 - - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
52. stk32a ENSDARG00000079499 17 0.902 - - 0.902 - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
53. zgc:77112 ENSDARG00000015657 24 0.898 - - 0.898 - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
54. ANGEL1 ENSDARG00000077567 38 0.894 - - 0.894 - - - - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
55. zgc:193801 ENSDARG00000076552 37 0.894 - - 0.894 - - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
56. ndufaf1 ENSDARG00000025549 42 0.891 - - 0.891 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
57. si:ch211-138a11.5 si:ch211-138a11.5 27 0.887 - - 0.887 - - - - - -
58. IQCG ENSDARG00000068678 77 0.886 - - 0.886 - - - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
59. glra1 ENSDARG00000012019 315 0.886 - - 0.886 - - - - - - glycine receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991117-1]
60. rprmb ENSDARG00000024006 120 0.884 - - 0.884 - - - - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
61. slc24a1 ENSDARG00000041431 33 0.884 - - 0.884 - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
62. CLDND1_1 CLDND1_1 50 0.883 - - 0.883 - - - - - -
63. CD93 CD93 270 0.878 - - 0.878 - - - - - -
64. spdya ENSDARG00000059131 33 0.876 - - 0.876 - - - - - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
65. edil3 edil3 24 0.874 - - 0.874 - - - - - -
66. rpap3 ENSDARG00000087962 22 0.868 - - 0.868 - - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
67. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.867 - - 0.867 - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
68. si:ch211-26b3.4 ENSDARG00000075491 50 0.862 - - 0.862 - - - - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
69. wdr47b ENSDARG00000099757 93 0.86 - - 0.860 - - - - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
70. si:ch211-218c6.9 si:ch211-218c6.9 40 0.858 - - 0.858 - - - - - -
71. esm1 ENSDARG00000104370 186 0.855 - - 0.855 - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
72. otud3 ENSDARG00000022648 263 0.849 - - 0.849 - - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
73. SYNDIG1 ENSDARG00000100751 165 0.849 - - 0.849 - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
74. PRPF6 ENSDARG00000091367 48 0.845 - - 0.845 - - - - - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
75. arl15a ENSDARG00000076040, ENSDARG00000114295 41 0.842 - - 0.842 - - - - - - ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
76. tmeff1a ENSDARG00000008191 74 0.839 - - 0.839 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
77. si:dkey-163m14.7 65 0.838 - - 0.838 - - - - - - si:dkey-163m14.7
78. PEG3_41 PEG3_41 124 0.837 - - 0.837 - - - - - -
79. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 0.836 - - 0.836 - - - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
80. si:rp71-80o10.4 ENSDARG00000094316 279 0.833 - - 0.833 - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
81. si:dkeyp-79c2.1 42 0.827 - - 0.827 - - - - - - si:dkeyp-79c2.1, transcript variant X2
82. mfsd12a ENSDARG00000061908 68 0.823 - - 0.823 - - - - - - major facilitator superfamily domain containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-4642]
83. zgc:92218 zgc:92218 64 0.821 - - 0.821 - - - - - -
84. si:ch211-136m16.8 ENSDARG00000090767 91 0.814 - - 0.814 - - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
85. rps6ka1 ENSDARG00000033437 366 0.813 - - 0.813 - - - - - - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
86. si:ch211-209l18.2 ENSDARG00000093111 14 0.807 - - 0.807 - - - - - - si:ch211-209l18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-682]
87. bicc1b ENSDARG00000070497 406 0.805 - - 0.805 - - - - - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
88. zgc:171901 ENSDARG00000074365 129 0.801 - - 0.801 - - - - - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
89. fam178a fam178a 29 0.798 - - 0.798 - - - - - -
90. aven ENSDARG00000002894 49 0.796 - - 0.796 - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
91. mapk8a ENSDARG00000031888 44 0.796 - - 0.796 - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
92. si:ch211-241b2.1 ENSDARG00000102950 526 0.796 - - 0.796 - - - - - - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
93. tmem123 ENSDARG00000095674 66 0.795 - - 0.795 - - - - - - transmembrane protein 123 [Source:ZFIN;Acc:ZDB-GENE-050419-69]
94. ddx11 ENSDARG00000011072 325 0.795 - - 0.795 - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
95. zgc:174696 ENSDARG00000110658 67 0.794 - - 0.794 - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
96. chac2 ENSDARG00000055078 86 0.792 - - 0.792 - - - - - - ChaC, cation transport regulator homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-050706-146]
97. dcp1a ENSDARG00000100136 714 0.791 - - 0.791 - - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
98. CU694315.1 CU694315.1 87 0.786 - - 0.786 - - - - - -
99. si:dkey-178e17.3 ENSDARG00000058658 271 0.785 - - 0.785 - - - - - - si:dkey-178e17.3 [Source:ZFIN;Acc:ZDB-GENE-081104-335]
100. C13H2orf50 C13H2orf50 87 0.782 - - 0.782 - - - - - -

There are 61 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA