Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spata18

Gene Name Gene ID Reads Annotation
spata18 ENSDARG00000052343 216 spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]










Genes with expression patterns similar to spata18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spata18 ENSDARG00000052343 216 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
2. atp1a1a.4 ENSDARG00000001870 1864 2.97 0.759 0.702 - - - 0.726 0.783 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
3. capsla ENSDARG00000103521 277 2.437 0.921 - - - - 0.796 0.720 - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
4. stab1 ENSDARG00000076484 717 2.408 - 0.774 - - - 0.851 0.783 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
5. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 2.401 0.811 0.705 - - - - 0.885 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
6. tekt2 ENSDARG00000028973 160 2.396 0.956 - - - - - 0.725 0.715 - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
7. mb ENSDARG00000031952 351 2.333 0.889 - - - - 0.719 0.725 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
8. kcnj1a.1 ENSDARG00000091232 110 2.326 0.849 - - - - 0.737 0.740 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
9. foxd2 ENSDARG00000058133 1150 2.287 - 0.770 - - - 0.783 0.734 - - forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
10. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 1.733 0.837 - - - - - 0.896 - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
11. ponzr1 ENSDARG00000090444 540 1.695 0.959 - - - - - 0.736 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
12. C8H9orf116 C8H9orf116 379 1.676 - - - - - 0.730 0.946 - -
13. si:rp71-17i16.6 ENSDARG00000095453 167 1.669 0.913 - - - - - 0.756 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
14. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.654 - 0.885 - - - - 0.769 - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
15. AL954146.5 AL954146.5 202 1.652 0.818 - - - - - 0.834 - -
16. ccl-c5a ccl-c5a 217 1.629 0.788 - - - - - 0.841 - -
17. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 1.621 0.807 - - - - - 0.814 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
18. mxra8a ENSDARG00000062222 530 1.617 - - - 0.827 - - - 0.790 - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
19. sod2 ENSDARG00000042644 1382 1.616 0.859 - - - - - 0.757 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
20. cpne2 ENSDARG00000007753 206 1.616 0.792 - - - - - 0.824 - - copine II [Source:ZFIN;Acc:ZDB-GENE-030131-7896]
21. atp1b1a ENSDARG00000013144 19744 1.612 0.750 - - - - - 0.862 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
22. pdhx ENSDARG00000051756 924 1.592 - 0.872 - - - 0.720 - - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
23. mrpl9 ENSDARG00000063249 783 1.59 - 0.857 - - - - 0.733 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
24. myct1 myct1 217 1.585 - 0.722 - - - - 0.863 - -
25. hsd17b10 ENSDARG00000017781 1793 1.584 - 0.807 - - - - 0.777 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
26. znrf1 ENSDARG00000020475 303 1.575 0.800 - - 0.775 - - - - - zinc and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1905]
27. BX890577.1 BX890577.1 257 1.572 - - - - - - 0.844 0.728 -
28. mrpl46 ENSDARG00000016307 613 1.564 - 0.815 - - - 0.749 - - - mitochondrial ribosomal protein L46 [Source:ZFIN;Acc:ZDB-GENE-040718-224]
29. TEKT4 ENSDARG00000028899 47 1.561 - - 0.703 - - - 0.858 - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
30. dnah12 ENSDARG00000059987 110 1.548 - - 0.704 - - - 0.844 - - dynein, axonemal, heavy chain 12 [Source:ZFIN;Acc:ZDB-GENE-090311-9]
31. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1.547 - - - - - 0.701 0.846 - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
32. lmo2 ENSDARG00000095019 1098 1.546 - - - - - 0.749 0.797 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
33. gal3st1 gal3st1 108 1.535 0.814 0.721 - - - - - - -
34. hps1 ENSDARG00000026170 131 1.534 - - - 0.781 - 0.753 - - - Hermansky-Pudlak syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-051113-152]
35. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 1.521 0.794 - - - - 0.727 - - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
36. CT955984.1 ENSDARG00000113577 1482 1.52 - 0.761 - - - - 0.759 - -
37. rpf2 ENSDARG00000043960 2719 1.518 - 0.776 - - - - 0.742 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
38. STYK1_1 STYK1_1 34 1.518 0.721 - - - - - 0.797 - -
39. zgc:101040 ENSDARG00000005176 369 1.515 0.786 - - - - - 0.729 - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
40. mal 906 1.514 0.760 - - - - - 0.754 - - mal, T-cell differentiation protein
41. fsta ENSDARG00000052846, ENSDARG00000113185 539 1.512 - 0.747 - - - - 0.765 - - follistatin a [Source:ZFIN;Acc:ZDB-GENE-990714-11]
42. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.509 0.770 - - - - - - 0.739 - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
43. BX571714.1 ENSDARG00000114727 243 1.506 0.706 - - - - - 0.800 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
44. pald1b ENSDARG00000039352 66 1.504 - - - 0.772 - - - 0.732 - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
45. hnf4g ENSDARG00000071565 117 1.5 0.736 - - - - - 0.764 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
46. mfsd4b ENSDARG00000079571 556 1.498 0.787 - - - - - 0.711 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
47. pdzk1ip1l pdzk1ip1l 171 1.497 0.767 - - - - - 0.730 - -
48. esrrb ENSDARG00000100847 636 1.484 0.769 - - - - - 0.715 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
49. tbata ENSDARG00000067831 193 1.481 - - - - - 0.755 - 0.726 - thymus, brain and testes associated [Source:ZFIN;Acc:ZDB-GENE-121030-4]
50. si:ch211-270n8.4 87 1.471 - - - - - 0.710 0.761 - - si:ch211-270n8.4
51. ptpn11b ENSDARG00000012340, ENSDARG00000114232 604 1.466 - 0.704 - - - - 0.762 - - protein tyrosine phosphatase, non-receptor type 11, b [Source:ZFIN;Acc:ZDB-GENE-040426-1158]
52. AEBP1 ENSDARG00000091726 1431 1.465 - - - 0.714 - 0.751 - - - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
53. eps8l3 eps8l3 144 1.459 - - - - - 0.750 0.709 - -
54. CABZ01093075.1 ENSDARG00000086616 251 1.455 - 0.749 - - - 0.706 - - - cabz01093075.1 [Source:ZFIN;Acc:ZDB-GENE-160113-9]
55. ssbp1 ENSDARG00000039350 809 1.451 - 0.721 - - - - 0.730 - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
56. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.45 - 0.715 - - - - 0.735 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
57. nop58 ENSDARG00000104353 8497 1.446 - - - - - 0.725 0.721 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
58. nmd3 ENSDARG00000015676 303 1.422 - 0.706 - - - - 0.716 - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
59. fhl3b ENSDARG00000104315 359 0.932 0.932 - - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
60. prr15lb ENSDARG00000029308, ENSDARG00000110636 25 0.929 0.929 - - - - - - - - proline rich 15-like b [Source:ZFIN;Acc:ZDB-GENE-050417-201]
61. C25H12orf73 C25H12orf73 2031 0.928 - 0.928 - - - - - - -
62. farsa ENSDARG00000098825 2813 0.926 - 0.926 - - - - - - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
63. enpep ENSDARG00000057064 84 0.916 0.916 - - - - - - - - glutamyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-050309-218]
64. si:ch211-197n1.2 58 0.916 0.916 - - - - - - - - si:ch211-197n1.2, transcript variant X1
65. CLDN10 CLDN10 38 0.914 - - - - - - 0.914 - -
66. pigo ENSDARG00000011743 928 0.913 0.913 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
67. mrpl27 ENSDARG00000032985 2158 0.909 - 0.909 - - - - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
68. aplnrb ENSDARG00000036670 546 0.909 - 0.909 - - - - - - - apelin receptor b [Source:ZFIN;Acc:ZDB-GENE-050913-90]
69. grip2a ENSDARG00000087187 401 0.908 - 0.908 - - - - - - - glutamate receptor interacting protein 2a [Source:ZFIN;Acc:ZDB-GENE-081104-132]
70. GCNT7 ENSDARG00000040608 91 0.905 - - - - - - 0.905 - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
71. SNORD65 SNORD65 35 0.901 0.901 - - - - - - - -
72. zgc:173770 ENSDARG00000076476 34 0.9 0.900 - - - - - - - - zgc:173770 [Source:ZFIN;Acc:ZDB-GENE-070822-29]
73. si:ch211-274p24.2 ENSDARG00000095185 92 0.9 0.900 - - - - - - - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
74. stx5al ENSDARG00000003175 21 0.9 0.900 - - - - - - - - syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
75. zfyve26 ENSDARG00000040131 87 0.9 0.900 - - - - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
76. CABZ01071446.1 CABZ01071446.1 4 0.9 0.900 - - - - - - - -
77. si:ch211-198d23.1 ENSDARG00000092574 104 0.9 0.900 - - - - - - - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
78. dclk1a ENSDARG00000018856 177 0.9 0.900 - - - - - - - - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
79. cryba1l1 ENSDARG00000032929 1868 0.9 0.900 - - - - - - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
80. CLMN ENSDARG00000096867 73 0.9 0.900 - - - - - - - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
81. VSIG10L ENSDARG00000089237 12 0.9 0.900 - - - - - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
82. cryba2a ENSDARG00000030349 1342 0.9 0.900 - - - - - - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
83. limch1a ENSDARG00000074275 2981 0.892 - 0.892 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
84. pdlim7 ENSDARG00000103854 465 0.892 - 0.892 - - - - - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
85. ubox5 ENSDARG00000058563 161 0.892 0.892 - - - - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
86. phf12a ENSDARG00000074303 1025 0.89 - 0.890 - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
87. rasa1b ENSDARG00000073665 397 0.889 - - - - - - 0.889 - - RAS p21 protein activator (GTPase activating protein) 1b [Source:ZFIN;Acc:ZDB-GENE-090311-50]
88. gpr182 ENSDARG00000036616 455 0.887 - - - - - - 0.887 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
89. smtnl ENSDARG00000055632, ENSDARG00000109489 788 0.887 - 0.887 - - - - - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
90. AL935046.1 AL935046.1 89 0.885 - - - - - - 0.885 - -
91. dpyda dpyda 12 0.884 0.884 - - - - - - - -
92. ryr1a ENSDARG00000011422 2377 0.883 - 0.883 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
93. si:ch73-167f18.3 si:ch73-167f18.3 78 0.882 0.882 - - - - - - - -
94. tmc4 ENSDARG00000031757 30 0.881 - - - - - - 0.881 - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
95. slc23a1 ENSDARG00000015033 40 0.88 - - - - - - 0.880 - - solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
96. TMPO TMPO 3264 0.88 - 0.880 - - - - - - -
97. nup43 ENSDARG00000043884 794 0.879 - - - - - - 0.879 - - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
98. RHBDF1 RHBDF1 131 0.876 - - - - - - 0.876 - -
99. si:ch211-114n24.6 ENSDARG00000036700 2243 0.876 - - - - - - 0.876 - - si:ch211-114n24.6 [Source:ZFIN;Acc:ZDB-GENE-120214-26]
100. TYRP1 TYRP1 1450 0.875 - - - - - - 0.875 - -

There are 1064 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA