Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spast

Gene Name Gene ID Reads Annotation
spast ENSDARG00000024933 557 spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]










Genes with expression patterns similar to spast

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spast ENSDARG00000024933 557 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
2. slc16a8 ENSDARG00000045153 478 1.709 - 0.780 - - - - - - 0.929 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
3. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 1.708 - - - - - - 0.763 - 0.945 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
4. ifrd1 ENSDARG00000068708 2858 1.677 - 0.740 - - - - - - 0.937 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
5. CENPF ENSDARG00000055133 436 1.662 - 0.729 - - - - - - 0.933 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
6. srek1ip1 ENSDARG00000043728 985 1.645 - 0.724 - - - - - - 0.921 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
7. pspc1 ENSDARG00000006621 966 1.635 0.750 - - - - - - - 0.885 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
8. ell ENSDARG00000000568 1404 1.621 - - - - - - 0.719 - 0.902 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
9. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.576 - 0.711 - - - - - - 0.865 deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
10. metrnl 1042 1.575 - 0.704 - - - - - - 0.871 meteorin, glial cell differentiation regulator-like
11. cables2a ENSDARG00000076964 1330 1.568 - - - - - - 0.718 - 0.850 Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
12. sesn3 ENSDARG00000015822 5328 1.55 - - - - - - 0.768 - 0.782 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
13. kcnk1a ENSDARG00000045067 743 1.538 0.782 0.756 - - - - - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
14. tmem209 ENSDARG00000039340 1598 1.528 - - - 0.742 - - - - 0.786 transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
15. apmap ENSDARG00000017422 2692 1.525 - - - 0.717 - - - - 0.808 adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
16. si:ch211-89f7.1 si:ch211-89f7.1 699 1.521 - 0.805 - 0.716 - - - - -
17. C5H9orf117 C5H9orf117 88 1.478 - 0.713 - 0.765 - - - - -
18. CABZ01038494.1 ENSDARG00000088258 908 1.41 0.701 - - - - - 0.709 - - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
19. rnf121 ENSDARG00000060282 1809 0.966 - - - - - - - - 0.966 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
20. yipf2 ENSDARG00000021399 702 0.964 - - - - - - - - 0.964 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
21. RABEPK ENSDARG00000112165 112 0.963 - - - - - - - - 0.963 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
22. cenpk ENSDARG00000039616 744 0.962 - - - - - - - - 0.962 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
23. rcbtb1 ENSDARG00000036645 255 0.961 - - - - - - - - 0.961 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
24. gpr143 ENSDARG00000034572 559 0.96 - - - - - - - - 0.960 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
25. smg6 ENSDARG00000100481 493 0.959 - - - - - - - - 0.959 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
26. RFFL_1 RFFL_1 157 0.957 - - - - - - - - 0.957
27. CR376785.2 CR376785.2 175 0.956 - - - - - - - - 0.956
28. CABZ01054405.1 CABZ01054405.1 115 0.955 - - - - - - - - 0.955
29. ttc1 ENSDARG00000044567 1141 0.954 - - - - - - - - 0.954 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
30. ltc4s ENSDARG00000062598 138 0.954 - - - - - - - - 0.954 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
31. nupl2 ENSDARG00000029043 105 0.954 - - - - - - - - 0.954 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
32. flrt1a 107 0.953 - - - - - - - - 0.953 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
33. trim16 ENSDARG00000010673 519 0.953 - - - - - - - - 0.953 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
34. abcg1 ENSDARG00000063475 97 0.952 - - - - - - - - 0.952 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
35. si:dkey-10p5.10 ENSDARG00000099307 371 0.952 - - - - - - - - 0.952 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
36. zgc:173480 171 0.952 - - - - - - - - 0.952 zgc:173480
37. lsm1 ENSDARG00000043177 767 0.952 - - - - - - - - 0.952 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
38. slc6a6a ENSDARG00000012534 183 0.95 - - - - - - - - 0.950 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
39. ptprk ENSDARG00000063416 742 0.95 - - - - - - - - 0.950 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
40. rab11fip3 ENSDARG00000016490 661 0.95 - - - - - - - - 0.950 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
41. KLF8 ENSDARG00000060661 219 0.95 - - - - - - - - 0.950 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
42. hdac10 ENSDARG00000086458 676 0.95 - - - - - - - - 0.950 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
43. PRDM12 PRDM12 133 0.95 - - - - - - - - 0.950
44. ZNFX1 ENSDARG00000100280 118 0.949 - - - - - - - - 0.949 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
45. rxrgb ENSDARG00000004697 332 0.949 - - - - - - - - 0.949 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
46. ttc21b ENSDARG00000012368 229 0.949 - - - - - - - - 0.949 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
47. si:dkey-156k2.6 si:dkey-156k2.6 848 0.949 - - - - - - - - 0.949
48. CR678040.1 CR678040.1 117 0.949 - - - - - - - - 0.949
49. oraov1 497 0.949 - - - - - - - - 0.949 oral cancer overexpressed 1
50. SNAP91 ENSDARG00000098809 556 0.948 - - - - - - - - 0.948 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
51. naa25 ENSDARG00000075446 1505 0.948 - - - - - - - - 0.948 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
52. tex10 ENSDARG00000055885 1229 0.948 - - - - - - - - 0.948 testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
53. DDX47_1 DDX47_1 453 0.948 - - - - - - - - 0.948
54. dopey1 438 0.947 - - - - - - - - 0.947 dopey family member 1, transcript variant X4
55. slc25a43 ENSDARG00000102048 489 0.947 - - - - - - - - 0.947 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
56. CTIF ENSDARG00000090617 270 0.947 - - - - - - - - 0.947 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
57. ndst2b ENSDARG00000060678 453 0.947 - - - - - - - - 0.947 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
58. ptn ENSDARG00000102340 229 0.947 - - - - - - - - 0.947 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
59. AKAP12 AKAP12 140 0.947 - - - - - - - - 0.947
60. ostf1 ENSDARG00000091555, ENSDARG00000114550 582 0.946 - - - - - - - - 0.946 osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
61. nrxn3b ENSDARG00000062693 192 0.946 - - - - - - - - 0.946 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
62. ror1 ENSDARG00000015176 378 0.946 - - - - - - - - 0.946 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
63. kcnq5a ENSDARG00000069954 492 0.946 - - - - - - - - 0.946 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
64. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.946 - - - - - - - - 0.946 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
65. ddx41 666 0.946 - - - - - - - - 0.946 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
66. prmt6 ENSDARG00000069706 484 0.945 - - - - - - - - 0.945 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
67. ZNF337_4 ZNF337_4 409 0.945 - - - - - - - - 0.945
68. si:ch211-133l11.10 ENSDARG00000005626 381 0.945 - - - - - - - - 0.945 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
69. daxx ENSDARG00000000729 734 0.945 - - - - - - - - 0.945 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
70. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.945 - - - - - - - - 0.945 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
71. dkk3b ENSDARG00000070683 209 0.945 - - - - - - - - 0.945 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
72. cnot3b ENSDARG00000019842 838 0.945 - - - - - - - - 0.945 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
73. hck ENSDARG00000058647 318 0.945 - - - - - - - - 0.945 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
74. CDIP1 ENSDARG00000076118 1294 0.945 - - - - - - - - 0.945 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
75. si:dkey-114c15.7 237 0.945 - - - - - - - - 0.945 si:dkey-114c15.7
76. ZFAT ENSDARG00000077987 205 0.945 - - - - - - - - 0.945 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
77. aftpha ENSDARG00000069249 867 0.945 - - - - - - - - 0.945 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
78. nsun2 ENSDARG00000056665 740 0.944 - - - - - - - - 0.944 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
79. AL929322.1 AL929322.1 300 0.944 - - - - - - - - 0.944
80. RNPEPL1 ENSDARG00000007813 557 0.944 - - - - - - - - 0.944 arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
81. umps ENSDARG00000012215 4564 0.943 - - - - - - - - 0.943 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
82. eef2a.1 ENSDARG00000042094 1781 0.943 - - - - - - - - 0.943 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
83. thsd7ba ENSDARG00000095022 231 0.943 - - - - - - - - 0.943 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
84. ube3d ENSDARG00000026178 244 0.943 - - - - - - - - 0.943 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
85. nol8 ENSDARG00000044143 425 0.941 - - - - - - - - 0.941 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
86. mafg2 mafg2 1041 0.941 - - - - - - - - 0.941
87. NHS NHS 409 0.941 - - - - - - - - 0.941
88. zgc:113348 ENSDARG00000103795 1351 0.941 - - - - - - - - 0.941 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
89. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.941 - - - - - - - - 0.941 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
90. FAM3D ENSDARG00000091625 1392 0.941 - - - - - - - - 0.941 family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
91. TUBB8P7_2 TUBB8P7_2 565 0.941 - - - - - - - - 0.941
92. pus7 ENSDARG00000031774 195 0.94 - - - - - - - - 0.940 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
93. ncam2 ENSDARG00000017466 175 0.94 - - - - - - - - 0.940 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
94. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.94 - - - - - - - - 0.940 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
95. pif1 ENSDARG00000020289 216 0.94 - - - - - - - - 0.940 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
96. CEP152 ENSDARG00000075725 391 0.94 - - - - - - - - 0.940 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
97. rac3a ENSDARG00000090062 394 0.94 - - - - - - - - 0.940 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
98. TAF2 ENSDARG00000102307 1401 0.939 - - - - - - - - 0.939 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
99. sema4ab ENSDARG00000062352 409 0.939 - - - - - - - - 0.939 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
100. ncoa6 ENSDARG00000071272 759 0.939 - - - - - - - - 0.939 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]

There are 1093 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA