Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sparc

Gene Name Gene ID Reads Annotation
sparc ENSDARG00000019353 38281 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]










Genes with expression patterns similar to sparc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sparc ENSDARG00000019353 38281 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
2. chd2 ENSDARG00000060687 3832 2.367 0.961 - - - 0.702 - 0.704 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
3. ogn 5002 2.33 - - 0.778 - - - - 0.768 0.784 osteoglycin
4. CABZ01028296.1 CABZ01028296.1 6203 2.323 - - 0.816 - 0.757 0.750 - - -
5. tnc ENSDARG00000021948, ENSDARG00000113518 12162 2.284 - - 0.706 0.703 - - - 0.875 - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
6. gtpbp4 ENSDARG00000018961 5323 1.726 0.967 0.759 - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
7. frem2a ENSDARG00000076856 11022 1.719 - - 0.864 - - - - 0.855 - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
8. ppp1cab ENSDARG00000071566 4350 1.713 0.968 0.745 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
9. FAM110D FAM110D 3632 1.712 0.930 - 0.782 - - - - - -
10. mybpc3 ENSDARG00000011615 7271 1.699 0.956 - - - - 0.743 - - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
11. psmd6 ENSDARG00000070674 4675 1.698 0.974 - - - - - 0.724 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
12. atg4b ENSDARG00000052104 758 1.685 0.970 - - - - - - - 0.715 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
13. WDR1 ENSDARG00000114022 7532 1.683 0.902 - 0.781 - - - - - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
14. atl3 ENSDARG00000004270 2806 1.68 0.957 - - - - - - 0.723 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
15. cep170a cep170a 652 1.676 0.970 - - - - - - - 0.706
16. srsf5b ENSDARG00000027734 6996 1.676 0.950 0.726 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
17. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.676 0.957 - - - - 0.719 - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
18. col11a1b ENSDARG00000009014 9998 1.67 0.947 - - - - - - 0.723 - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
19. ildr1a ENSDARG00000103929 2390 1.664 0.937 - - - - - - 0.727 - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
20. sgcb ENSDARG00000052341 4168 1.664 0.959 - - - - 0.705 - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
21. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.648 0.934 - 0.714 - - - - - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
22. psmc2 ENSDARG00000020101 8095 1.646 0.919 0.727 - - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
23. gars ENSDARG00000059070 17015 1.646 0.908 - - - 0.738 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
24. crtap ENSDARG00000018010 7722 1.632 0.919 - - 0.713 - - - - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
25. and2 ENSDARG00000079302 20939 1.63 - - 0.749 - - - - 0.881 - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
26. sqrdl 1598 1.628 0.923 - 0.705 - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
27. dcxr ENSDARG00000079271 3289 1.612 0.907 0.705 - - - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
28. cers5 ENSDARG00000002365 2540 1.611 0.897 - - - 0.714 - - - - ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
29. fam3c ENSDARG00000056152 3833 1.607 0.844 - - - - 0.763 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
30. actr2a ENSDARG00000052438 5838 1.598 0.880 0.718 - - - - - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
31. rbb4 rbb4 15541 1.588 0.857 0.731 - - - - - - -
32. arl4ca ENSDARG00000057606 4686 1.555 0.850 - - 0.705 - - - - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
33. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.553 - - - - - - - 0.765 0.788 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
34. hoxd13a ENSDARG00000059256 1190 1.544 - - 0.778 - - - - 0.766 - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
35. cdkn1c cdkn1c 17427 1.526 - - - - 0.758 0.768 - - -
36. thbs4b ENSDARG00000020072 2500 1.52 - - - - - 0.754 - 0.766 - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
37. and3 ENSDARG00000056873 22650 1.518 - - 0.795 - - - - 0.723 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
38. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.516 - - 0.786 - 0.730 - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
39. mir205 2147 1.516 - - - - - 0.758 - - 0.758 microRNA 205
40. MAL 9331 1.516 - - - 0.710 - - - - 0.806 mal, T-cell differentiation protein
41. qkia ENSDARG00000097478 18572 1.515 - - 0.806 - - - 0.709 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
42. ldha ENSDARG00000101251 10868 1.515 - - - - - 0.800 0.715 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
43. plcg1 ENSDARG00000038442 5324 1.512 - - 0.733 - 0.779 - - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
44. EML4_1 EML4_1 8736 1.508 - - 0.772 - - - - 0.736 -
45. si:ch211-157c3.4 ENSDARG00000087093 22736 1.507 - - - - - 0.709 - - 0.798 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
46. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.507 - - 0.753 - - 0.754 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
47. lama5 ENSDARG00000058543 2782 1.499 - - 0.745 0.754 - - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
48. plcd1b ENSDARG00000034080 4074 1.497 - - - - - - - 0.737 0.760 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
49. asap2b ENSDARG00000019564 1660 1.493 - - 0.729 - - - - - 0.764 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
50. myh10 ENSDARG00000000103 7522 1.49 - 0.737 - - 0.753 - - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
51. cldne ENSDARG00000043128 6960 1.489 - - - 0.727 - - - - 0.762 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
52. COL2A1 COL2A1 18161 1.481 - - - - - 0.773 - 0.708 -
53. yy1b ENSDARG00000027978 2669 1.48 - 0.758 - - - - - - 0.722 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
54. pfn1 ENSDARG00000088091 71242 1.477 - - - - - - - 0.719 0.758 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
55. atp5f1 16797 1.477 0.754 0.723 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
56. ing2 ENSDARG00000104907 1336 1.477 - 0.743 - - - - - - 0.734 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
57. sar1b ENSDARG00000103403 1699 1.474 - - 0.761 - - - - - 0.713 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
58. ACTR3 ENSDARG00000091138 1739 1.471 - - 0.701 - - - - 0.770 - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
59. PVRL4 1691 1.458 - - 0.714 - - - - - 0.744 poliovirus receptor-related 4
60. sort1b ENSDARG00000056252 2652 1.446 - 0.720 - - - - - - 0.726 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
61. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.444 - - 0.733 - 0.711 - - - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
62. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.441 - 0.724 - - - 0.717 - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
63. mgea5 6076 1.439 - 0.711 - - - 0.728 - - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
64. arhgdig ENSDARG00000004034 10368 1.434 - - 0.725 - - - - 0.709 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
65. tmem258 ENSDARG00000078785 9578 1.425 - - - - - 0.720 - - 0.705 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
66. CABZ01034848.1 CABZ01034848.1 9936 1.416 - - 0.711 - - 0.705 - - -
67. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.416 - - 0.702 - 0.714 - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
68. b3gnt2b ENSDARG00000091902 4125 1.408 - - 0.706 - - - - - 0.702 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
69. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.976 0.976 - - - - - - - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
70. mat2b ENSDARG00000012932 3146 0.975 0.975 - - - - - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
71. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 0.974 0.974 - - - - - - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
72. nr2f1b ENSDARG00000017168 1487 0.974 0.974 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
73. cant1a ENSDARG00000012192 1324 0.973 0.973 - - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
74. ghitm 1443 0.973 0.973 - - - - - - - - growth hormone inducible transmembrane protein
75. BX511021.1 ENSDARG00000073936 647 0.973 0.973 - - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
76. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 0.972 0.972 - - - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
77. ryr1a ENSDARG00000011422 2377 0.972 0.972 - - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
78. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.971 0.971 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
79. rnf168 ENSDARG00000112483 594 0.971 0.971 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
80. gbx1 ENSDARG00000071418 871 0.971 0.971 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
81. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.971 0.971 - - - - - - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
82. ep300b ENSDARG00000061108 5173 0.971 0.971 - - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
83. vars ENSDARG00000044575 1367 0.97 0.970 - - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
84. whsc1 1701 0.97 0.970 - - - - - - - - Wolf-Hirschhorn syndrome candidate 1
85. chst14 ENSDARG00000043011 345 0.97 0.970 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
86. tmem194a tmem194a 745 0.97 0.970 - - - - - - - -
87. slc22a2 ENSDARG00000030530 313 0.97 0.970 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
88. dnajc11 1939 0.97 0.970 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
89. eef2a.1 ENSDARG00000042094 1781 0.97 0.970 - - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
90. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.97 0.970 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
91. RNF214 RNF214 816 0.97 0.970 - - - - - - - -
92. itm2ca ENSDARG00000043448 1265 0.97 0.970 - - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
93. aclya ENSDARG00000099079 2324 0.97 0.970 - - - - - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
94. taf6l ENSDARG00000079684 1408 0.97 0.970 - - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
95. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.969 0.969 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
96. wdr3 ENSDARG00000011079 1403 0.969 0.969 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
97. SUSD4 ENSDARG00000026335 195 0.969 0.969 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
98. apip ENSDARG00000003132 1212 0.969 0.969 - - - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
99. poc1bl ENSDARG00000012745 2451 0.969 0.969 - - - - - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
100. ino80db ENSDARG00000062226 504 0.969 0.969 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]

There are 842 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA