Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sp4

Gene Name Gene ID Reads Annotation
sp4 ENSDARG00000005186 2904 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]










Genes with expression patterns similar to sp4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sp4 ENSDARG00000005186 2904 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
2. pum1 ENSDARG00000099256 5017 2.411 - 0.795 - - - - 0.895 - 0.721 pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
3. cdc34b ENSDARG00000012627 3879 2.377 - 0.907 - - - 0.700 0.770 - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
4. sdc4 ENSDARG00000059906 10105 2.359 - 0.860 - - 0.767 - 0.732 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
5. eif3ja ENSDARG00000012603 6324 2.257 - 0.721 - - - 0.761 0.775 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
6. eif2s1a ENSDARG00000005827 5992 2.217 - 0.726 - - - - 0.755 - 0.736 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
7. HIPK1_1 HIPK1_1 8096 2.208 - - - - 0.736 0.760 - - 0.712
8. lypla2 ENSDARG00000053656 8971 2.2 - 0.719 - - - - 0.746 - 0.735 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
9. puf60a ENSDARG00000032175 5618 2.188 - 0.721 - - - 0.708 - - 0.759 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
10. bcas2 ENSDARG00000043631 1971 2.168 - - - - - 0.706 0.707 - 0.755 BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
11. nfe2l3 ENSDARG00000019810 3682 2.153 - - - 0.717 - 0.707 0.729 - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
12. zfand5b ENSDARG00000002271 4145 1.665 - 0.791 - - 0.874 - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
13. nop16 ENSDARG00000044402 3645 1.647 - - - - 0.875 - 0.772 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
14. sumo3a ENSDARG00000028119 13447 1.619 - - - - - - 0.847 - 0.772 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
15. kmt2ca ENSDARG00000079312 2109 1.597 - 0.814 - - - - 0.783 - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
16. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.584 - - - - - 0.835 - - 0.749 ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
17. dla ENSDARG00000010791 9281 1.582 - - - - 0.802 - - - 0.780 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
18. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.576 - - - - - - 0.802 - 0.774 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
19. ccnb1 ENSDARG00000051923 3226 1.574 - - - - 0.723 0.851 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
20. ube2nb ENSDARG00000045877 4583 1.569 - 0.737 - - - - 0.832 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
21. srgap2a srgap2a 7197 1.568 - 0.773 - - - - 0.795 - -
22. si:ch211-161h7.4 ENSDARG00000087238 4399 1.565 - 0.802 - - - - 0.763 - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
23. irf2bpl ENSDARG00000004297 1861 1.564 - 0.802 - - - - - - 0.762 interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
24. hsdl2 ENSDARG00000002523 2746 1.564 - 0.744 - - - - 0.820 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
25. si:ch211-173p18.3 ENSDARG00000035821 1917 1.563 - - - - - - 0.759 - 0.804 si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
26. si:dkey-117n7.3 ENSDARG00000092944 2518 1.56 - - - - - 0.755 0.805 - - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
27. ccrn4la ccrn4la 843 1.559 - 0.763 - - - - 0.796 - -
28. nt5dc2 ENSDARG00000059646 3878 1.552 - - - - 0.810 - 0.742 - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
29. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.551 - 0.791 - - - - 0.760 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
30. hnrnpul1 ENSDARG00000040564 6550 1.551 - - - - - - 0.814 - 0.737 heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
31. golga7 ENSDARG00000057676 4691 1.547 - - - - - - 0.799 - 0.748 golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
32. EML4_1 EML4_1 8736 1.547 - 0.739 - - - 0.808 - - -
33. hn1b hn1b 7325 1.545 - 0.820 - - - - 0.725 - -
34. si:ch73-46j18.5 ENSDARG00000092467 6002 1.542 - 0.726 - - - 0.816 - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
35. PELP1 ENSDARG00000079313 5771 1.538 - - - - - 0.736 0.802 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
36. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.535 - 0.728 - - - - 0.807 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
37. fkbp2 ENSDARG00000044540 1615 1.533 - 0.737 - - - - 0.796 - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
38. cdk6 ENSDARG00000070228 1778 1.53 - - - - - - 0.780 - 0.750 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
39. C10H11orf30 C10H11orf30 1982 1.53 - - - 0.705 - - 0.825 - -
40. safb ENSDARG00000020467 5608 1.529 - - - - - 0.731 - - 0.798 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
41. bin3 ENSDARG00000099651 3295 1.529 - - - - - 0.739 0.790 - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
42. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.528 - - - - - - 0.745 - 0.783 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
43. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.528 - 0.797 - - - 0.731 - - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
44. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.524 - - - - - - 0.765 - 0.759 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
45. gorasp1 gorasp1 3075 1.52 - 0.775 - - - - 0.745 - -
46. myef2 ENSDARG00000059398 6050 1.517 - - - - - - 0.755 - 0.762 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
47. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.514 - 0.780 - - 0.734 - - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
48. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.512 - - - - - 0.788 - - 0.724 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
49. sp3a ENSDARG00000001549 1994 1.511 - 0.797 - - - - - 0.714 - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
50. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.51 - - - - - - 0.748 - 0.762 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
51. usp7 ENSDARG00000073710 7017 1.509 - - - - - 0.790 - - 0.719 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
52. adcy7 ENSDARG00000060070 1878 1.508 - 0.805 - - - - 0.703 - - adenylate cyclase 7 [Source:ZFIN;Acc:ZDB-GENE-040713-1]
53. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.507 - - - - 0.718 - - - 0.789 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
54. lsm14aa ENSDARG00000006600 2298 1.505 - - - - - 0.758 0.747 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
55. vta1 ENSDARG00000013732 6072 1.503 - 0.739 - - - 0.764 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
56. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.498 - - - - - - 0.756 - 0.742 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
57. cacybp ENSDARG00000014731 2650 1.497 0.715 0.782 - - - - - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
58. gse1 ENSDARG00000062020 2337 1.495 - 0.746 - - - - 0.749 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
59. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.495 - 0.750 - - 0.745 - - - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
60. arfgap2 ENSDARG00000067601 6801 1.494 - 0.728 - - - - 0.766 - - ADP-ribosylation factor GTPase activating protein 2 [Source:ZFIN;Acc:ZDB-GENE-051120-177]
61. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.494 - - - - - - 0.726 - 0.768 transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
62. SYMPK ENSDARG00000059553 1159 1.493 - - - - - - 0.751 - 0.742 symplekin [Source:ZFIN;Acc:ZDB-GENE-060526-361]
63. nup98 ENSDARG00000074955 3998 1.489 - 0.784 - - 0.705 - - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
64. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.487 - - - - - - 0.756 - 0.731 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
65. WDFY3 ENSDARG00000078890 2092 1.486 - 0.715 - - - - 0.771 - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
66. FNBP4 ENSDARG00000051800 2839 1.486 - 0.716 - - - - - - 0.770 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
67. PACS1 PACS1 2061 1.485 - - - - 0.700 - 0.785 - -
68. CREM CREM 1333 1.485 - 0.740 - - - - 0.745 - -
69. Sep-03 Sep-03 1124 1.483 - - - 0.746 - - - - 0.737
70. efna1a ENSDARG00000030326 1692 1.482 - 0.711 - - - 0.771 - - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
71. itga5 ENSDARG00000006353 1876 1.482 - 0.739 - - - - 0.743 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
72. apex1 ENSDARG00000045843 6345 1.481 - - - 0.714 - - - 0.767 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
73. eif2s3 ENSDARG00000008292 17051 1.481 - 0.703 - - 0.778 - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
74. znf827 ENSDARG00000076171 6304 1.481 - 0.751 - - - - - - 0.730 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
75. foxp1b ENSDARG00000014181 2594 1.481 - - - - - - 0.779 - 0.702 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
76. notch2 ENSDARG00000043130 4430 1.478 - - - - - 0.741 0.737 - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
77. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.472 - 0.771 - - - - 0.701 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
78. gatad2ab ENSDARG00000006192 2461 1.469 - 0.754 - - - - 0.715 - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
79. rbm17 ENSDARG00000031346 2079 1.467 - - - - 0.703 - 0.764 - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
80. get4 ENSDARG00000024398 1818 1.466 - 0.718 - - - - 0.748 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
81. nav2b ENSDARG00000001879 1121 1.466 - 0.701 - - - - 0.765 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
82. paip2b ENSDARG00000008706 4255 1.465 - 0.735 - - - - 0.730 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
83. ppt1 ENSDARG00000039980 1599 1.461 - - - - - 0.751 0.710 - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
84. smek1 ENSDARG00000042187 3509 1.46 - - - - - 0.756 - - 0.704 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
85. fgfr2 ENSDARG00000058115 6743 1.46 - - - - - - 0.738 - 0.722 fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
86. g3bp1 ENSDARG00000017741 7622 1.458 - 0.736 - - - - - - 0.722 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
87. rnf10 ENSDARG00000079687 6768 1.456 0.743 - - - - - 0.713 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
88. sh2d3ca ENSDARG00000028099 1037 1.453 - - - 0.728 - - - - 0.725 SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
89. CASKIN2_1 CASKIN2_1 2299 1.45 - - - - 0.714 - 0.736 - -
90. tbl1xr1a ENSDARG00000058696 5439 1.448 - 0.705 - - - - - - 0.743 transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
91. snrpb ENSDARG00000011125 11729 1.445 - - - - 0.719 - 0.726 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
92. setd5 ENSDARG00000078576 1974 1.444 - 0.728 - - - - 0.716 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
93. slc39a13 ENSDARG00000000442 1367 1.444 - 0.727 - - 0.717 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
94. wasf2 ENSDARG00000024209 5338 1.442 - 0.732 - - - - 0.710 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
95. pdia3 ENSDARG00000102640 7239 1.442 - 0.717 - - - - 0.725 - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
96. vezf1a ENSDARG00000008247 1449 1.441 - - - - - - - 0.725 0.716 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
97. ctnnd2b ENSDARG00000003779 964 1.436 - - - - 0.721 - - - 0.715 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
98. sppl3 ENSDARG00000025220 1892 1.433 - 0.716 - - - - - - 0.717 signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
99. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.433 - 0.725 - - - - - 0.708 - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
100. mier1a ENSDARG00000041072 1690 1.432 - - - - 0.700 - 0.732 - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA