Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox9a

Gene Name Gene ID Reads Annotation
sox9a ENSDARG00000003293 812 SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]










Genes with expression patterns similar to sox9a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox9a ENSDARG00000003293 812 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
2. IGSF10 ENSDARG00000077497 317 2.504 0.787 - - - - 0.883 0.834 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
3. si:dkeyp-12a9.5 3058 2.457 0.799 - - - - 0.857 0.801 - - si:dkeyp-12a9.5
4. PAQR4 PAQR4 2150 2.441 0.753 - - - - 0.823 0.865 - -
5. plod2 ENSDARG00000011821 1656 2.431 - 0.713 - - - 0.925 0.793 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
6. cthrc1a ENSDARG00000087198 1001 2.382 - 0.761 - - - 0.785 0.836 - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
7. tgfbi ENSDARG00000071586 17779 2.349 0.710 - - - - 0.833 0.806 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
8. ryr3 ENSDARG00000071331 6795 2.344 - 0.764 - - - 0.802 0.778 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
9. CABZ01079764.1 CABZ01079764.1 12103 2.337 0.751 - - - - 0.736 0.850 - -
10. myoz2b ENSDARG00000037266 2139 2.316 0.762 0.713 - - - - 0.841 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
11. ntd5 ENSDARG00000040944 4988 2.294 0.747 - - - - 0.737 0.810 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
12. sptb ENSDARG00000030490 7128 2.278 - 0.765 - - - 0.721 0.792 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
13. pi15a ENSDARG00000045378 2361 2.247 0.704 - - - - 0.739 0.804 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
14. NRAP ENSDARG00000009341 3565 2.214 - 0.748 - - - 0.713 0.753 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
15. CABZ01113191.1 CABZ01113191.1 388 2.186 0.709 - - - - 0.736 0.741 - -
16. CABZ01090021.1 CABZ01090021.1 655 2.169 0.722 0.738 - - - - 0.709 - -
17. mef2aa ENSDARG00000031756 2699 2.166 - 0.711 - - - 0.710 0.745 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
18. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.157 0.705 0.726 - - - 0.726 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
19. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.813 - - - - - 0.936 0.877 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
20. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 1.733 - - - - - 0.862 0.871 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
21. epyc ENSDARG00000056950 7783 1.723 - - - - - 0.882 0.841 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
22. tppp3 ENSDARG00000030463 992 1.718 - - - - - 0.823 0.895 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
23. chad ENSDARG00000045071 903 1.714 - - - - - 0.835 0.879 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
24. eng1a eng1a 484 1.714 - 0.838 - - - - 0.876 - -
25. tgfb3 ENSDARG00000019367 2327 1.711 - - - - - 0.878 0.833 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
26. ntla ntla 926 1.698 - - - - - 0.818 0.880 - -
27. si:ch211-152c2.3 ENSDARG00000045898 3448 1.666 - - - - - 0.806 0.860 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
28. tspan7b ENSDARG00000008407 5740 1.664 0.738 - - - - - 0.926 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
29. acana ENSDARG00000035891 118 1.664 - - - - - 0.863 0.801 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
30. CR792456.1 CR792456.1 783 1.664 - - - - - 0.804 0.860 - -
31. tnnt2d ENSDARG00000002988 7590 1.664 - 0.803 - - - - 0.861 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
32. myhc4 ENSDARG00000035438 1322 1.661 - 0.774 - - - - 0.887 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
33. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.636 0.768 - - - - - 0.868 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
34. CABZ01044297.1 CABZ01044297.1 2015 1.629 - - - - - 0.824 0.805 - -
35. crip2 ENSDARG00000070670 4844 1.607 - - - - - 0.743 0.864 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
36. COBLL1_1 COBLL1_1 787 1.606 - - - - - 0.801 0.805 - -
37. clic5a ENSDARG00000075993, ENSDARG00000115073 607 1.606 - - - - - 0.770 0.836 - - chloride intracellular channel 5a [Source:ZFIN;Acc:ZDB-GENE-041114-84]
38. CR450814.3 CR450814.3 608 1.605 - - - - - 0.850 0.755 - -
39. col27a1a 1747 1.603 - - - - - 0.845 0.758 - - collagen, type XXVII, alpha 1a
40. plcl1 ENSDARG00000067676 2457 1.599 - - - - - 0.747 0.852 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
41. alpk3a ENSDARG00000078989 1992 1.597 - 0.730 - - - 0.867 - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
42. mybphb ENSDARG00000003081 5208 1.589 - 0.787 - - - - 0.802 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
43. smpx ENSDARG00000045302 2175 1.588 0.791 - - - - - 0.797 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
44. BX842614.2 BX842614.2 799 1.587 0.716 - - - - - 0.871 - -
45. nmrk2 ENSDARG00000067848 10293 1.586 - 0.777 - - - - 0.809 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
46. col9a3 ENSDARG00000037845 6564 1.572 - - - - - 0.771 0.801 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
47. C13H10orf71 3489 1.569 - 0.734 - - - - 0.835 - - chromosome 13 C10orf71 homolog
48. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.568 0.785 - - - - - 0.783 - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
49. plxnb1a ENSDARG00000075821 1702 1.567 - - - - - 0.796 0.771 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
50. CABZ01097761.1 ENSDARG00000116119 445 1.567 0.774 - - - - - 0.793 - - dual specificity protein phosphatase 13-like [Source:NCBI gene;Acc:100537679]
51. susd5 ENSDARG00000088277 439 1.562 - - - - - 0.766 0.796 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
52. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.561 - - - - - 0.820 0.741 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
53. zgc:194470 zgc:194470 210 1.56 0.841 0.719 - - - - - - -
54. lgals2a ENSDARG00000054942 888 1.559 - 0.809 - - - - 0.750 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
55. smtnl1 ENSDARG00000041257 7410 1.555 0.748 - - - - - 0.807 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
56. aox3 aox3 399 1.553 - - - - - 0.703 0.850 - -
57. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.549 - - - - - 0.701 0.848 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
58. srl ENSDARG00000104587 11126 1.549 - 0.743 - - - - 0.806 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
59. dhrs7c dhrs7c 1173 1.547 - 0.725 - - - - 0.822 - -
60. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.545 - 0.731 - - - - 0.814 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
61. plod1a ENSDARG00000059746 3364 1.543 - - - - - 0.782 0.761 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
62. BX470254.1 ENSDARG00000097402 1389 1.542 - - - - - 0.755 0.787 - -
63. loxl5b ENSDARG00000076904 468 1.539 - - - - - 0.795 0.744 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
64. map3k7cl ENSDARG00000069143 130 1.539 0.729 - - - - - 0.810 - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
65. FRMD5 ENSDARG00000075942 569 1.539 - - - - - 0.709 0.830 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
66. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.536 0.723 - - - - - 0.813 - -
67. prx ENSDARG00000017246 6183 1.535 - 0.756 - - - - 0.779 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
68. trdn ENSDARG00000041779 4283 1.533 0.710 - - - - - 0.823 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
69. scara3 ENSDARG00000008060 169 1.532 - - - - - 0.719 0.813 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
70. EHBP1L1 EHBP1L1 2500 1.529 - 0.776 - - - - 0.753 - -
71. pbxip1a ENSDARG00000071015 4960 1.528 - 0.797 - - - - 0.731 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
72. fam46bb 601 1.527 - - - - - 0.707 0.820 - - family with sequence similarity 46, member Bb
73. CABZ01086825.1 CABZ01086825.1 573 1.522 - 0.716 - - - - 0.806 - -
74. tgm2a ENSDARG00000070157 4516 1.521 0.731 - - - - - 0.790 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
75. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.518 - - - - - 0.767 0.751 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
76. MUSTN1 MUSTN1 1882 1.512 - 0.768 - - - - 0.744 - -
77. C12H10orf71 C12H10orf71 595 1.507 0.706 - - - - 0.801 - - -
78. ablim2 ENSDARG00000055223 1934 1.504 - - - - - 0.769 0.735 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
79. arpp21 ENSDARG00000061081 892 1.504 0.749 0.755 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
80. egf ENSDARG00000052739, ENSDARG00000114581 141 1.503 - - - - - 0.775 0.728 - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
81. ism1 ENSDARG00000020541 1241 1.502 - - - - - 0.760 0.742 - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
82. ICT1 356 1.501 - 0.750 - - - 0.751 - - - immature colon carcinoma transcript 1
83. nexn ENSDARG00000057317 10972 1.499 0.723 - - - - - 0.776 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
84. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.498 - - - - - 0.764 0.734 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
85. BX294434.1 ENSDARG00000061272 6493 1.496 - 0.712 - - - - 0.784 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
86. PTPLA PTPLA 4044 1.495 0.765 - - - - - 0.730 - -
87. asb2a asb2a 845 1.493 - - - - - 0.716 0.777 - -
88. fitm1 ENSDARG00000056464 1759 1.491 - 0.782 - - - 0.709 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
89. si:ch211-242b18.1 ENSDARG00000054723 2929 1.491 - 0.747 - - - - 0.744 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
90. rbm24a ENSDARG00000102995 5123 1.487 - - - - - 0.762 0.725 - - RNA binding motif protein 24a [Source:ZFIN;Acc:ZDB-GENE-040628-1]
91. DUSP27 ENSDARG00000099889 1197 1.484 - 0.732 - - - - 0.752 - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
92. ptch2 ENSDARG00000055026 980 1.482 - - - - - 0.744 0.738 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
93. hdac9b ENSDARG00000056642 1148 1.481 0.726 - - - - - 0.755 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
94. smarcd3a ENSDARG00000038786 2894 1.481 - 0.749 - - - 0.732 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
95. ehd2 ehd2 1089 1.481 0.763 - - - - 0.718 - - -
96. ppapdc3 ppapdc3 4924 1.481 - - - - - 0.732 0.749 - -
97. slc8a3 ENSDARG00000004931 338 1.478 0.778 - - - - - 0.700 - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
98. si:dkey-246i21.1 197 1.477 - 0.746 - - - - 0.731 - - si:dkey-246i21.1, transcript variant X2
99. cldn5b ENSDARG00000014059 654 1.475 - 0.718 - - - 0.757 - - - claudin 5b [Source:ZFIN;Acc:ZDB-GENE-041010-140]
100. plecb ENSDARG00000021987 13621 1.474 0.710 0.764 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]

There are 734 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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