Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sox7

Gene Name Gene ID Reads Annotation
sox7 ENSDARG00000030125 806 SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]










Genes with expression patterns similar to sox7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox7 ENSDARG00000030125 806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
2. lpar1 ENSDARG00000099840 2010 2.298 0.701 0.799 - - - - 0.798 - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
3. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 1.957 - 0.962 - - - 0.995 - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
4. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 1.918 - 0.920 - - - 0.998 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
5. smim7 ENSDARG00000074848 1260 1.886 - 0.888 - - - 0.998 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
6. crfb17 511 1.834 - 0.836 - - - 0.998 - - - cytokine receptor family member B17
7. fam3a ENSDARG00000070675, ENSDARG00000115910 1377 1.803 - 0.809 - - - 0.994 - - - family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]
8. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.797 - - - - - 0.998 0.799 - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
9. tmem161b ENSDARG00000055989 680 1.723 - 0.897 - - - - 0.826 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
10. CLDN23 CLDN23 2002 1.72 - 0.768 - - - 0.952 - - -
11. dus3l ENSDARG00000099528 1192 1.72 - - - - - 0.998 0.722 - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
12. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 1.718 - 0.929 - 0.789 - - - - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
13. FAM117A_1 FAM117A_1 360 1.708 - - - - - 0.999 0.709 - -
14. ttc9c ENSDARG00000007025 463 1.702 - 0.918 - 0.784 - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
15. CPAMD8 ENSDARG00000056530 3481 1.698 - 0.815 - 0.883 - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
16. zgc:162232 zgc:162232 251 1.693 - 0.854 - 0.839 - - - - -
17. gspt1l ENSDARG00000098627 8381 1.688 - 0.718 - - - 0.970 - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
18. rnd3b ENSDARG00000007396 881 1.676 - 0.830 - - - - 0.846 - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
19. CABZ01032467.1 CABZ01032467.1 400 1.671 - - - 0.930 - - 0.741 - -
20. HUS1 ENSDARG00000101611 187 1.669 0.749 0.920 - - - - - - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
21. TRIM14 TRIM14 1424 1.656 - 0.824 - - - 0.832 - - -
22. si:dkey-57k17.1 ENSDARG00000104697 442 1.64 - 0.897 - 0.743 - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
23. si:dkeyp-53d3.6 204 1.64 - - - 0.887 - - 0.753 - - si:dkeyp-53d3.6, transcript variant X1
24. e2f8 ENSDARG00000057323 1432 1.636 - 0.918 - - - - 0.718 - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
25. bloc1s4 ENSDARG00000007597 365 1.63 - - - 0.826 - - 0.804 - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
26. haao ENSDARG00000076487 143 1.614 - - - 0.905 - - 0.709 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
27. RAP1A RAP1A 502 1.612 - 0.908 - 0.704 - - - - -
28. pop5 ENSDARG00000053452 1347 1.608 - 0.865 - - - - 0.743 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
29. thyn1 ENSDARG00000042659, ENSDARG00000113223 459 1.607 - - - 0.809 - - 0.798 - - thymocyte nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1585]
30. ptprga ENSDARG00000045006 719 1.606 - 0.878 - 0.728 - - - - - protein tyrosine phosphatase, receptor type, g a [Source:ZFIN;Acc:ZDB-GENE-101101-4]
31. aggf1 ENSDARG00000060109 574 1.595 - 0.895 - - - - 0.700 - - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
32. exoc3l4 ENSDARG00000058180 923 1.585 - - - 0.866 - - 0.719 - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
33. fam129ba ENSDARG00000062970 1578 1.572 - 0.752 - 0.820 - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
34. clica clica 6206 1.565 - 0.798 - - - 0.767 - - -
35. kif23 ENSDARG00000014943, ENSDARG00000116561 845 1.561 - 0.775 - - - - 0.786 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
36. foxf2a ENSDARG00000017195 345 1.536 - - - - - - 0.820 0.716 - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
37. pigu ENSDARG00000075530 348 1.521 0.796 - - - - - 0.725 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
38. ddx56 ENSDARG00000020913 1070 1.512 0.706 0.806 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
39. sox10 ENSDARG00000077467 1936 1.496 - - - - - - - 0.793 0.703 SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
40. nuf2 ENSDARG00000034624 2252 1.49 - 0.788 - - - - 0.702 - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
41. mrps25 ENSDARG00000041306 3654 1.488 - 0.760 - - - - 0.728 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
42. PRODH PRODH 13 1.429 - - - - - - 0.712 - 0.717
43. DUSP13_1 DUSP13_1 425 0.999 - - - - - 0.999 - - -
44. orc4 ENSDARG00000101161 1081 0.999 - - - - - 0.999 - - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
45. BX322787.1 ENSDARG00000105779 381 0.999 - - - - - 0.999 - - -
46. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.999 - - - - - 0.999 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
47. CABZ01035189.1 CABZ01035189.1 1070 0.999 - - - - - 0.999 - - -
48. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.999 - - - - - 0.999 - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
49. dot1l ENSDARG00000061992 602 0.999 - - - - - 0.999 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
50. cradd ENSDARG00000028192 153 0.999 - - - - - 0.999 - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
51. si:dkey-221j11.3 ENSDARG00000093304 1001 0.999 - - - - - 0.999 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
52. SNORA21 SNORA21 547 0.999 - - - - - 0.999 - - -
53. MON1B_1 MON1B_1 697 0.999 - - - - - 0.999 - - -
54. CU571255.1 CU571255.1 902 0.999 - - - - - 0.999 - - -
55. kcna1 kcna1 174 0.999 - - - - - 0.999 - - -
56. RAB11FIP5 RAB11FIP5 626 0.999 - - - - - 0.999 - - -
57. ins ENSDARG00000035350, ENSDARG00000116735 317 0.999 - - - - - 0.999 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
58. CABZ01041962.1 ENSDARG00000076082 690 0.999 - - - - - 0.999 - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
59. irs2 irs2 392 0.999 - - - - - 0.999 - - -
60. epc1 epc1 1164 0.998 - - - - - 0.998 - - -
61. efcab7 ENSDARG00000020279 1030 0.998 - - - - - 0.998 - - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
62. PHYHIP ENSDARG00000116497 456 0.998 - - - - - 0.998 - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
63. chid1 ENSDARG00000069673 675 0.998 - - - - - 0.998 - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
64. ssh2a ENSDARG00000088440 1149 0.998 - - - - - 0.998 - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
65. si:dkey-9i23.16 ENSDARG00000093954 929 0.998 - - - - - 0.998 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
66. ing2 ENSDARG00000104907 1336 0.998 - - - - - 0.998 - - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
67. prc1a ENSDARG00000100918 1746 0.998 - - - - - 0.998 - - - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
68. dnah9l ENSDARG00000062630 268 0.998 - - - - - 0.998 - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
69. C13H9orf72 C13H9orf72 2310 0.998 - - - - - 0.998 - - -
70. zgc:153924 507 0.998 - - - - - 0.998 - - - zgc:153924
71. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 0.998 - - - - - 0.998 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
72. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.998 - - - - - 0.998 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
73. RMDN2 ENSDARG00000078761 717 0.998 - - - - - 0.998 - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
74. fbxl22 ENSDARG00000096995 1290 0.998 - - - - - 0.998 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
75. txnl4a ENSDARG00000036190 2048 0.997 - - - - - 0.997 - - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
76. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.997 - - - - - 0.997 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
77. pigs ENSDARG00000017813 718 0.997 - - - - - 0.997 - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
78. sec62 ENSDARG00000019951 3724 0.997 - - - - - 0.997 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
79. iqsec2 iqsec2 304 0.997 - - - - - 0.997 - - -
80. oacyl ENSDARG00000075191 351 0.997 - - - - - 0.997 - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
81. rpa2 ENSDARG00000037188 4284 0.997 - - - - - 0.997 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
82. mier1a ENSDARG00000041072 1690 0.997 - - - - - 0.997 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
83. mtmr2 ENSDARG00000004616 1052 0.997 - - - - - 0.997 - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
84. tmed7 ENSDARG00000046022 2435 0.997 - - - - - 0.997 - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
85. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.997 - - - - - 0.997 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
86. MAP1S_1 MAP1S_1 1117 0.997 - - - - - 0.997 - - -
87. dusp8a ENSDARG00000009299 1302 0.996 - - - - - 0.996 - - - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
88. fam21c 1768 0.996 - - - - - 0.996 - - - family with sequence similarity 21, member C, transcript variant X6
89. stk38a ENSDARG00000019973 1343 0.996 - - - - - 0.996 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
90. suv420h1 1810 0.996 - - - - - 0.996 - - - suppressor of variegation 4-20 homolog 1 (Drosophila)
91. znf280d ENSDARG00000077013 1387 0.996 - - - - - 0.996 - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
92. gk5 ENSDARG00000062864 738 0.996 - - - - - 0.996 - - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
93. cwc22 ENSDARG00000014008 2385 0.996 - - - - - 0.996 - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
94. peli2 ENSDARG00000029045 844 0.996 - - - - - 0.996 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
95. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 0.996 - - - - - 0.996 - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
96. zgc:77391 zgc:77391 1445 0.995 - - - - - 0.995 - - -
97. si:ch211-232i5.1 ENSDARG00000078072 1337 0.995 - - - - - 0.995 - - - si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
98. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 0.995 - - - - - 0.995 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
99. ssu72 ENSDARG00000031216 2350 0.995 - - - - - 0.995 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
100. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.995 - - - - - 0.995 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]

There are 1254 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA