Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox6

Gene Name Gene ID Reads Annotation
sox6 ENSDARG00000015536 7728 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]










Genes with expression patterns similar to sox6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox6 ENSDARG00000015536 7728 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
2. ppapdc3 ppapdc3 4924 4.237 0.823 0.980 - - 0.822 0.731 0.881 - -
3. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 4.216 0.881 0.990 - - 0.701 0.753 0.891 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
4. nexn ENSDARG00000057317 10972 3.348 0.880 - - - 0.811 0.781 0.876 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
5. smtnl1 ENSDARG00000041257 7410 3.33 0.849 - 0.889 - - 0.731 0.861 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
6. acsl1 acsl1 4216 3.305 0.793 0.968 - - - 0.741 0.803 - -
7. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.295 0.868 - - - 0.712 0.827 0.888 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
8. PTGES3L PTGES3L 4801 3.202 0.782 - - - 0.793 0.795 0.832 - -
9. xirp2a ENSDARG00000071113 7113 3.162 0.855 - 0.736 - - - 0.867 - 0.704 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
10. klhl40a ENSDARG00000039052 2537 3.117 0.842 - - - 0.715 0.721 0.839 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
11. tnnt2c ENSDARG00000032242 28801 2.989 0.718 - - 0.722 0.781 - 0.768 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
12. pvalb4 ENSDARG00000024433 35736 2.648 0.835 0.981 - - - - 0.832 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
13. fxr1 ENSDARG00000022968 2831 2.6 0.938 - - - - 0.759 0.903 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
14. phb ENSDARG00000057414 9551 2.572 0.756 0.987 - - - - 0.829 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
15. CABZ01074435.1 CABZ01074435.1 4551 2.523 0.831 - - - - 0.784 0.908 - -
16. flncb ENSDARG00000018820 5595 2.515 0.891 - - - - 0.704 0.920 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
17. atp1b3b ENSDARG00000042837 5163 2.515 0.823 - - - - 0.784 0.908 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
18. cox6a1 ENSDARG00000022438 18811 2.514 0.772 0.967 - - - - 0.775 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
19. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.507 0.836 - - - - 0.765 0.906 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
20. limch1a ENSDARG00000074275 2981 2.507 0.811 - - - - 0.812 0.884 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
21. capzb ENSDARG00000100252 10444 2.502 - 0.973 - - - 0.745 0.784 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
22. klhl41b ENSDARG00000006757 10762 2.493 0.801 - - - 0.819 - 0.873 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
23. MYOT ENSDARG00000076312 1791 2.489 0.856 - - - - 0.725 0.908 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
24. arvcfb ENSDARG00000061688 2388 2.488 0.866 - - - - 0.752 0.870 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
25. ryr3 ENSDARG00000071331 6795 2.487 0.804 - - - - 0.791 0.892 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
26. txlnbb ENSDARG00000076241 6396 2.48 0.824 - - - - 0.817 0.839 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
27. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.478 0.797 - 0.833 - - - 0.848 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
28. usp2a ENSDARG00000020107 2586 2.473 0.769 - - - - 0.798 0.906 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
29. mrps6 ENSDARG00000039543 1892 2.462 0.790 0.949 - - - - 0.723 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
30. smyd1a ENSDARG00000009280 1503 2.455 - 0.889 - - - 0.735 0.831 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
31. zgc:92518 ENSDARG00000016343 3837 2.451 0.840 - - - - 0.717 0.894 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
32. synpo2lb ENSDARG00000078696 2361 2.45 0.792 - - - 0.760 - 0.898 - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
33. unc45b ENSDARG00000008433 8298 2.442 0.828 - - - 0.748 - 0.866 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
34. sh3bgr ENSDARG00000021633 3498 2.437 0.806 - - - - 0.784 0.847 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
35. gstm gstm 4064 2.431 0.868 - 0.724 - - - 0.839 - -
36. prx ENSDARG00000017246 6183 2.424 0.816 - - - - - 0.899 - 0.709 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
37. alpk3a ENSDARG00000078989 1992 2.422 0.846 - - - - 0.776 0.800 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
38. nars ENSDARG00000061100 2948 2.42 0.800 - - - - 0.765 0.855 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
39. lsm6 ENSDARG00000036995 4377 2.419 0.706 - 0.795 - - - 0.918 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
40. hsp90aa1.1 ENSDARG00000010478 47784 2.413 - - - 0.730 0.838 - 0.845 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
41. fitm1 ENSDARG00000056464 1759 2.411 0.793 - - - - 0.761 0.857 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
42. NRAP ENSDARG00000009341 3565 2.411 0.820 - - - - 0.728 0.863 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
43. PTP4A3 ENSDARG00000039997 3814 2.405 0.831 - - - - 0.773 0.801 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
44. cacng1 cacng1 3118 2.4 0.839 - - - - 0.777 0.784 - -
45. PTPLA PTPLA 4044 2.398 0.805 - - - - 0.728 0.865 - -
46. chrna1 ENSDARG00000009021 2931 2.392 0.827 - - - - 0.707 0.858 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
47. mibp2 ENSDARG00000101844 17444 2.386 0.777 - - - - 0.881 0.728 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
48. TRIM63 TRIM63 1600 2.358 0.749 - - - - 0.743 0.866 - -
49. ntmt1 ENSDARG00000022399 5779 2.358 0.763 - - - 0.719 - 0.876 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
50. CR847973.1 ENSDARG00000115516 8754 2.352 0.764 - - - - 0.702 0.886 - -
51. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.347 0.762 - - - - 0.734 0.851 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
52. eif4e2 ENSDARG00000038585 2116 2.344 0.776 - - - - 0.788 0.780 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
53. rps25 ENSDARG00000041811 52182 2.344 0.755 - - - - 0.823 0.766 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
54. CR388002.1 CR388002.1 1998 2.343 0.754 - - - 0.775 - 0.814 - -
55. pbxip1b ENSDARG00000011824 3726 2.339 0.763 - 0.873 - 0.703 - - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
56. crip2 ENSDARG00000070670 4844 2.336 0.746 - - - - 0.749 0.841 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
57. tnnc1b ENSDARG00000037539 13945 2.322 - - - - 0.769 0.734 0.819 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
58. smpx ENSDARG00000045302 2175 2.322 0.710 - - - - 0.750 0.862 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
59. klhl21 ENSDARG00000039255 2550 2.321 0.761 - - - - 0.709 0.851 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
60. ATP5J_2 ATP5J_2 2381 2.319 0.742 - - - - 0.728 0.849 - -
61. hars ENSDARG00000003693 7217 2.303 0.794 - - - - 0.738 0.771 - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
62. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 2.302 - 0.813 - - 0.712 0.777 - - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
63. znf648 ENSDARG00000104823 1918 2.3 0.819 - - - - 0.733 0.748 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
64. tmem161a ENSDARG00000012790 16094 2.288 0.867 - - 0.711 - - - - 0.710 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
65. aimp1 ENSDARG00000060036 5343 2.285 0.725 - - - - 0.715 0.845 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
66. cct7 ENSDARG00000007385 1513 2.283 0.741 - - - - 0.781 0.761 - - chaperonin containing TCP1, subunit 7 (eta) [Source:ZFIN;Acc:ZDB-GENE-020419-7]
67. obsl1b ENSDARG00000077388 2511 2.282 0.761 - - - - 0.712 0.809 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
68. txnipb ENSDARG00000070000 2365 2.282 0.710 - - - - 0.747 0.825 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
69. metap2a ENSDARG00000069261 762 2.28 0.845 - - - - 0.726 0.709 - - methionyl aminopeptidase 2a [Source:ZFIN;Acc:ZDB-GENE-061013-5]
70. myoz2b ENSDARG00000037266 2139 2.279 0.748 - - - - 0.709 0.822 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
71. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.278 0.799 - - - - 0.720 0.759 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
72. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 2.273 0.790 - - - - - 0.766 - 0.717 ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
73. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.272 0.739 - - - - 0.719 0.814 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
74. mef2d ENSDARG00000040237 6144 2.271 0.759 - - - - 0.776 0.736 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
75. smyd2a ENSDARG00000055151 2505 2.271 0.756 - - - 0.711 - 0.804 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
76. ola1 ENSDARG00000044565 22424 2.258 - 0.708 - - - 0.799 - - 0.751 Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
77. gyg1a ENSDARG00000011934 2276 2.235 0.732 - - - - 0.770 0.733 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
78. sdhdb ENSDARG00000030139 9761 2.201 0.742 - - - - 0.717 - - 0.742 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
79. cyc1 ENSDARG00000038075 16699 2.201 0.709 - - - - 0.756 0.736 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
80. fat1 fat1 3934 2.191 0.709 - - - - 0.713 0.769 - -
81. lrrfip1a ENSDARG00000030012 1263 2.182 0.718 - - - - 0.729 0.735 - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
82. rps19 ENSDARG00000030602 77975 2.15 0.704 0.745 - - - - 0.701 - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
83. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.838 - 0.951 - - - - 0.887 - -
84. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.823 - 0.962 - - - - 0.861 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
85. twf2a ENSDARG00000094792 687 1.815 - 0.954 - - - - 0.861 - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
86. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.814 - 0.966 0.848 - - - - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
87. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.79 - 0.975 - - - - 0.815 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
88. myod1 ENSDARG00000030110 6019 1.786 0.871 - - - - - 0.915 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
89. CR354540.2 ENSDARG00000117517 18452 1.771 0.875 - - - - - 0.896 - -
90. rtn2a ENSDARG00000016088 12184 1.765 0.884 - - - - - 0.881 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
91. sgcd ENSDARG00000098573 4980 1.759 0.862 - - - - - 0.897 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
92. znf106a ENSDARG00000016651 6049 1.758 0.832 - - - - - 0.926 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
93. akap6 ENSDARG00000077295 1382 1.757 0.849 - - - - - 0.908 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
94. usp28 ENSDARG00000008880 1850 1.757 0.841 - - - - - 0.916 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
95. adss ENSDARG00000002071 5497 1.756 0.841 - - - - - 0.915 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
96. murcb murcb 13655 1.756 0.837 - - - - - 0.919 - -
97. tns1 tns1 5891 1.752 0.879 - - - - - 0.873 - -
98. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 1.749 - 0.955 0.794 - - - - - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
99. CABZ01076275.1 ENSDARG00000100753 5137 1.746 - 0.958 0.788 - - - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
100. jph2 ENSDARG00000028625 6706 1.746 0.850 - - - - - 0.896 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]

There are 1506 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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