Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox21a

Gene Name Gene ID Reads Annotation
sox21a ENSDARG00000031664, ENSDARG00000111842 1700 SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]










Genes with expression patterns similar to sox21a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
2. dla ENSDARG00000010791 9281 3.091 0.756 0.897 0.713 - - - 0.725 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
3. neurog1 ENSDARG00000056130 3924 3.02 0.724 0.810 - - - 0.773 0.713 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
4. nhlh2 ENSDARG00000025495 1860 2.631 0.964 0.703 0.964 - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
5. cplx2l ENSDARG00000018997 3975 2.531 0.734 0.849 0.948 - - - - - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
6. PROCA1 ENSDARG00000069823 343 2.462 0.801 0.900 - - - - 0.761 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
7. pou3f2a ENSDARG00000070220 817 2.451 - - 0.963 - - 0.723 0.765 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
8. CABZ01029738.1 CABZ01029738.1 327 2.437 0.869 0.737 - - - - 0.831 - -
9. nkx6.2 ENSDARG00000104735 5081 2.436 - - - - 0.977 0.710 0.749 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
10. CU928222.1 ENSDARG00000097436 1662 2.41 0.825 0.780 - - - - 0.805 - -
11. tmem35 ENSDARG00000052567 5685 2.404 0.776 - - - - 0.820 0.808 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
12. tmie ENSDARG00000069423 305 2.394 0.841 - - - - 0.838 0.715 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
13. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.378 0.901 0.745 - - - - 0.732 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
14. nova2 ENSDARG00000017673 7685 2.364 0.867 0.758 - - - - 0.739 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
15. sox2 ENSDARG00000070913 2763 2.359 0.866 0.705 - - - - 0.788 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
16. her2 ENSDARG00000038205 3219 2.347 0.829 - - - - 0.766 0.752 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
17. dbx1a ENSDARG00000086393 3161 2.331 0.781 0.740 - - - 0.810 - - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
18. C8H1orf106 C8H1orf106 2690 2.325 - - - 0.731 - 0.734 0.860 - -
19. BX511121.1 ENSDARG00000029997 1774 2.319 - 0.812 - - - 0.732 0.775 - -
20. slc35g2b ENSDARG00000045447 378 2.317 0.850 0.737 - - - - 0.730 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
21. ptprnb ENSDARG00000077047 2743 2.314 0.841 0.729 - - - 0.744 - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
22. irx1b ENSDARG00000056594 2224 2.307 0.771 0.803 - - - - 0.733 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
23. dnmt3ab ENSDARG00000015566 1206 2.303 0.803 0.702 - - - - 0.798 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
24. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.295 0.701 0.727 - - - - 0.867 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
25. ctnnd2b ENSDARG00000003779 964 2.259 0.843 - - - 0.704 - 0.712 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
26. AGO1 ENSDARG00000092644 4521 2.215 0.753 0.726 - - - - 0.736 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
27. her4.3 ENSDARG00000070770 613 2.197 - - - - 0.718 0.774 0.705 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
28. gap43 ENSDARG00000099744 4114 2.163 0.715 0.729 - - - - 0.719 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
29. epb41a ENSDARG00000099283 860 2.14 0.729 - - - - 0.702 0.709 - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
30. MCAM MCAM 1765 1.885 - - 0.952 - - - 0.933 - -
31. mapk12b ENSDARG00000006409 2246 1.824 0.880 - 0.944 - - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
32. gfap ENSDARG00000025301 5584 1.817 0.859 - 0.958 - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
33. syt12 ENSDARG00000101776 215 1.763 0.883 - - - - 0.880 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
34. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.753 0.853 0.900 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
35. prph ENSDARG00000028306 242 1.744 0.908 - - - - - 0.836 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
36. ELOVL4 ELOVL4 3026 1.731 0.770 - 0.961 - - - - - -
37. tspan7b ENSDARG00000008407 5740 1.719 - - 0.901 - - - 0.818 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
38. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.708 - - - - - 0.802 0.906 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
39. tnw 16679 1.708 - - 0.920 - - - 0.788 - - tenascin W, transcript variant X2
40. cldn5a ENSDARG00000043716 3865 1.698 - - 0.897 - - - 0.801 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
41. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 1.697 - - 0.950 - - - 0.747 - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
42. hmp19 2554 1.695 0.973 - - - - - 0.722 - - HMP19 protein
43. nes ENSDARG00000088805 2710 1.69 0.920 - - - - - 0.770 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
44. syt11a ENSDARG00000057913 1145 1.683 - - 0.958 - - - 0.725 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
45. prep ENSDARG00000057151 3016 1.678 - - 0.958 - - - 0.720 - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
46. apba1b ENSDARG00000074328 254 1.676 - - - - - 0.918 0.758 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
47. ftr78 ftr78 273 1.674 - - 0.955 - - - 0.719 - -
48. PPP2R5B ENSDARG00000054931 213 1.672 0.923 - - - - - 0.749 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
49. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.668 0.708 - 0.960 - - - - - - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
50. pax6b ENSDARG00000045936 349 1.665 - 0.890 - - - 0.775 - - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
51. dlb ENSDARG00000004232 5120 1.661 - 0.731 0.930 - - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
52. CABZ01028287.1 CABZ01028287.1 626 1.66 0.915 - - - - - 0.745 - -
53. nrarpb ENSDARG00000018958 6225 1.658 0.924 - - - - - 0.734 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
54. si:dkey-19e4.5 ENSDARG00000089886 2562 1.656 - - 0.955 - 0.701 - - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
55. vim ENSDARG00000010008 3551 1.644 0.815 - - - - - 0.829 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
56. nell2b ENSDARG00000062797 854 1.635 0.909 - - - - 0.726 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
57. flrt1b ENSDARG00000075597 465 1.632 0.863 - - - - - 0.769 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
58. zgc:100906 ENSDARG00000033599 344 1.626 0.909 - - - - - 0.717 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
59. TRIM46 TRIM46 73 1.626 0.800 - - - - 0.826 - - -
60. fam43b ENSDARG00000070222 92 1.625 0.830 - - - - 0.795 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
61. FAM171A2 FAM171A2 707 1.621 0.889 0.732 - - - - - - -
62. si:dkey-14d8.6 ENSDARG00000045835 72 1.618 0.861 - - - - - 0.757 - - si:dkey-14d8.6 [Source:ZFIN;Acc:ZDB-GENE-041210-124]
63. chga ENSDARG00000008829 1086 1.618 0.877 - - - - 0.741 - - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
64. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.616 0.800 - - - - 0.816 - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
65. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.614 - 0.813 - - - - 0.801 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
66. ssbp3b ENSDARG00000030155 7163 1.613 - - 0.874 - - - 0.739 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
67. vamp1 ENSDARG00000031283 3094 1.611 0.732 0.879 - - - - - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
68. nrsn1 ENSDARG00000111235 123 1.61 0.875 - - - - - 0.735 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
69. rgs17 ENSDARG00000039435 590 1.605 0.763 - - - - - 0.842 - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
70. hectd2 ENSDARG00000061194 559 1.602 - - - - - 0.828 0.774 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
71. lhx4 ENSDARG00000039458 328 1.598 - - - - - 0.844 0.754 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
72. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 1.597 - - - - 0.704 - 0.893 - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
73. negr1 ENSDARG00000021607 1051 1.597 0.838 - - - - - 0.759 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
74. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.592 0.821 - - - - 0.771 - - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
75. ptch2 ENSDARG00000055026 980 1.59 - - - - - 0.734 0.856 - - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
76. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.589 0.880 - - - - - 0.709 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
77. DNER ENSDARG00000061031 123 1.587 0.800 - - - - 0.787 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
78. Sep-03 Sep-03 1124 1.585 0.749 0.836 - - - - - - -
79. fat3a ENSDARG00000033840 902 1.585 0.838 - - - - - 0.747 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
80. syngr3b ENSDARG00000025034 290 1.576 - - - - - 0.784 0.792 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
81. CDK5R1 CDK5R1 562 1.572 0.753 - - - - - 0.819 - -
82. sertad2a ENSDARG00000093412 503 1.571 - - - - - 0.722 0.849 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
83. fam57ba ENSDARG00000026875 504 1.57 0.781 - - - - - 0.789 - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
84. sox3 ENSDARG00000053569 12016 1.567 0.763 0.804 - - - - - - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
85. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.563 - - 0.839 - - - 0.724 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
86. sox21b ENSDARG00000008540 1460 1.561 0.817 - - - - - 0.744 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
87. gcfc2 ENSDARG00000079020 479 1.555 - - - - 0.708 0.847 - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
88. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.555 0.726 - 0.829 - - - - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
89. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.554 - 0.729 - - - 0.825 - - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
90. slc6a1b ENSDARG00000039647 1301 1.546 0.764 - - - - - 0.782 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
91. sox19b ENSDARG00000040266 532 1.544 - 0.757 - - - 0.787 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
92. lfng ENSDARG00000037879 11783 1.541 0.765 0.776 - - - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
93. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.541 - - - - - 0.736 0.805 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
94. robo3 ENSDARG00000005645 2818 1.539 0.767 - - - - - 0.772 - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
95. ache ENSDARG00000031796 1985 1.533 - - - - - 0.720 0.813 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
96. BAI1 BAI1 173 1.532 0.821 - - - - - 0.711 - -
97. syngr3a ENSDARG00000014871 405 1.53 0.824 - - - - - 0.706 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
98. EPB41L1 EPB41L1 1896 1.528 0.776 - - - - 0.752 - - -
99. CHL1 CHL1 1553 1.527 0.779 - - - - - 0.748 - -
100. gdf11 ENSDARG00000044924 534 1.525 - - - - - 0.780 0.745 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]

There are 1637 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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