Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox1b

Gene Name Gene ID Reads Annotation
sox1b ENSDARG00000008131 379 SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]










Genes with expression patterns similar to sox1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox1b ENSDARG00000008131 379 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]
2. pitpnab ENSDARG00000044091 306 1.543 - - - - - 0.725 - 0.818 - phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]
3. rab42a ENSDARG00000034215 692 1.537 - - - - - 0.814 - 0.723 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
4. apba1b ENSDARG00000074328 254 1.527 - - - - - 0.748 - 0.779 - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
5. slc1a3b ENSDARG00000043148 431 1.511 - - 0.786 - - 0.725 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
6. mapre3a ENSDARG00000020231 100 1.502 - - - - - 0.739 - 0.763 - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
7. ankrd46b ENSDARG00000015780 213 1.492 - - - - - 0.706 - 0.786 - ankyrin repeat domain 46b [Source:ZFIN;Acc:ZDB-GENE-050114-7]
8. pigp ENSDARG00000038805 611 1.463 - - - 0.717 - - - 0.746 - phosphatidylinositol glycan anchor biosynthesis, class P [Source:ZFIN;Acc:ZDB-GENE-030131-4041]
9. tacc1 ENSDARG00000073753 1127 1.449 0.740 0.709 - - - - - - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
10. cog6 ENSDARG00000103149 39 0.932 - - - - - 0.932 - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
11. CR376785.2 CR376785.2 175 0.921 - - - - - 0.921 - - -
12. si:ch1073-160m15.1 si:ch1073-160m15.1 74 0.9 - - - - - 0.900 - - -
13. odz4 odz4 822 0.887 - - - - - 0.887 - - -
14. nlgn3b ENSDARG00000062376 171 0.885 - - - - - 0.885 - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
15. SNAPC2 ENSDARG00000036473 158 0.883 - - - - - 0.883 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
16. fzd9b ENSDARG00000014673, ENSDARG00000116739 155 0.882 - - - - - 0.882 - - - frizzled class receptor 9b [Source:ZFIN;Acc:ZDB-GENE-000906-4]
17. calca ENSDARG00000056590 150 0.881 - - - - - 0.881 - - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
18. C12H16orf52 C12H16orf52 193 0.87 0.870 - - - - - - - -
19. gpr56 gpr56 523 0.868 - - - - - 0.868 - - -
20. nrg2b ENSDARG00000086585 100 0.867 - - - - - 0.867 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
21. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.865 - - - - - 0.865 - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
22. SCAMP5 SCAMP5 19 0.862 - - - - - 0.862 - - -
23. zgc:113276 ENSDARG00000056650 218 0.853 - - - - - 0.853 - - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
24. pbx3a ENSDARG00000089262 97 0.852 - - - - - 0.852 - - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
25. CU302326.2 CU302326.2 54 0.85 - - - - - 0.850 - - -
26. ptpn21 ENSDARG00000062248 2010 0.845 - - - - - - 0.845 - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
27. ATAD2 ENSDARG00000076590 411 0.843 0.843 - - - - - - - - ATPase family, AAA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7003]
28. thsd7ba ENSDARG00000095022 231 0.839 - - - - - - - 0.839 - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
29. nfia ENSDARG00000062420 573 0.836 - - - - - 0.836 - - - nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
30. NPAS3 ENSDARG00000109820 362 0.832 - - - - - 0.832 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
31. evlb ENSDARG00000099720 245 0.832 - - - - - 0.832 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
32. ggctb ENSDARG00000005085 704 0.831 - - - - - 0.831 - - - gamma-glutamylcyclotransferase b [Source:ZFIN;Acc:ZDB-GENE-040426-1939]
33. atrnl1b ENSDARG00000006420 641 0.83 - - - - - 0.830 - - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
34. TMTC2 TMTC2 478 0.825 - - - - - 0.825 - - -
35. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.825 - - - - - 0.825 - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
36. CT573433.2 CT573433.2 115 0.823 - - - - - 0.823 - - -
37. CABZ01041604.1 ENSDARG00000059854 35 0.82 - - - - - 0.820 - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
38. CABZ01071911.2 CABZ01071911.2 64 0.817 - - - - - 0.817 - - -
39. pyyb ENSDARG00000035832 18 0.816 - - - - - 0.816 - - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
40. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 0.816 - - - - - 0.816 - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
41. nkx2.1a nkx2.1a 156 0.816 - - - - - 0.816 - - -
42. GRAMD1B_1 GRAMD1B_1 10 0.816 - - - - - 0.816 - - -
43. setmar ENSDARG00000074836 29 0.816 - - - - - 0.816 - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
44. oprl1 ENSDARG00000071209 58 0.814 - - - - - 0.814 - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
45. BX470211.1 ENSDARG00000105629 111 0.814 - 0.814 - - - - - - -
46. nhlh2 ENSDARG00000025495 1860 0.813 - - - - - 0.813 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
47. prok1 ENSDARG00000073948, ENSDARG00000114411 26 0.812 - - - - - 0.812 - - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
48. myo16 ENSDARG00000078582 714 0.81 - - - - - 0.810 - - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
49. igdcc3 ENSDARG00000075158 1921 0.808 - - - - - 0.808 - - - immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
50. suz12a ENSDARG00000070256 2229 0.808 - - - - - 0.808 - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
51. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.807 - - - - - 0.807 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
52. atpv0e2 ENSDARG00000059057 585 0.806 - - - - - - - 0.806 - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
53. tbkbp1 ENSDARG00000061473 24 0.806 - - - - - 0.806 - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
54. ctsk ENSDARG00000040251 1111 0.806 - 0.806 - - - - - - - cathepsin K [Source:ZFIN;Acc:ZDB-GENE-001205-4]
55. nkx2.1b nkx2.1b 125 0.805 - - 0.805 - - - - - -
56. scrn3 ENSDARG00000016611 74 0.805 - - - - - 0.805 - - - secernin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4783]
57. rab32a ENSDARG00000029036 2157 0.804 - 0.804 - - - - - - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
58. sv2bb ENSDARG00000060711 196 0.804 - - - - - 0.804 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
59. pgm3 ENSDARG00000024654 366 0.803 - 0.803 - - - - - - - phosphoglucomutase 3 [Source:ZFIN;Acc:ZDB-GENE-041024-13]
60. rnf19b ENSDARG00000060926 157 0.801 - - - - - 0.801 - - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
61. si:dkey-149i7.2 si:dkey-149i7.2 176 0.8 - 0.800 - - - - - - -
62. SLC22A23_1 SLC22A23_1 308 0.797 - - - - - 0.797 - - -
63. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.797 - - - - - - 0.797 - - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
64. pag1 ENSDARG00000055875 21 0.796 - - - - - 0.796 - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
65. slc6a5 ENSDARG00000067964, ENSDARG00000111378 34 0.796 - - - - - 0.796 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
66. ephb2b ENSDARG00000021539 521 0.795 - 0.795 - - - - - - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
67. tmem240 tmem240 180 0.795 - - - - - 0.795 - - -
68. tmie ENSDARG00000069423 305 0.795 - - - - - 0.795 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
69. si:ch211-152f6.6 si:ch211-152f6.6 278 0.794 - - - - - 0.794 - - -
70. mxra7 ENSDARG00000095300 332 0.793 - - - - - - 0.793 - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
71. CAMSAP3 ENSDARG00000059475 263 0.793 - - - - - 0.793 - - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]
72. ephb3a ENSDARG00000031548 1872 0.792 - - - - - 0.792 - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
73. SNORA74 SNORA74 284 0.791 - - - - - 0.791 - - -
74. CABZ01087514.1 ENSDARG00000090861 245 0.791 - - - - - 0.791 - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
75. ndst2a ENSDARG00000086269 754 0.791 0.791 - - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
76. ctnnd2b ENSDARG00000003779 964 0.79 - - - - - 0.790 - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
77. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.789 - - - - - 0.789 - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
78. rassf2a ENSDARG00000029865, ENSDARG00000113625 1134 0.789 - - - - - 0.789 - - - Ras association (RalGDS/AF-6) domain family member 2a [Source:ZFIN;Acc:ZDB-GENE-040912-124]
79. her12 ENSDARG00000032963 754 0.789 - - - - - 0.789 - - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
80. ankrd13a ENSDARG00000061901 1192 0.789 - 0.789 - - - - - - - ankyrin repeat domain 13A [Source:ZFIN;Acc:ZDB-GENE-030131-1833]
81. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 0.789 - - - - - 0.789 - - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
82. CABZ01090951.1 CABZ01090951.1 78 0.788 - - - - - 0.788 - - -
83. PRR5L PRR5L 408 0.788 - - - - - 0.788 - - -
84. lhx4 ENSDARG00000039458 328 0.788 - - - - - 0.788 - - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
85. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 0.787 - - - - - 0.787 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
86. ptpn5 ENSDARG00000074866 548 0.787 - - - - - - - 0.787 - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
87. BX284638.2 BX284638.2 265 0.787 - - - - - 0.787 - - -
88. elavl3 ENSDARG00000014420 8644 0.787 - - - - - 0.787 - - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
89. CDK5R1 CDK5R1 562 0.787 - - - - - 0.787 - - -
90. zic2b ENSDARG00000037178, ENSDARG00000112354 993 0.786 - - - - - - - 0.786 - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
91. zgc:109949 ENSDARG00000103413 426 0.786 - - - - - - - 0.786 - zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
92. stag2a ENSDARG00000011783 1588 0.786 - 0.786 - - - - - - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
93. sox9b ENSDARG00000043923 5375 0.785 - - - - - 0.785 - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
94. dpysl5b ENSDARG00000059311 600 0.785 - - - - - 0.785 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
95. si:ch211-161h7.6 si:ch211-161h7.6 129 0.784 - 0.784 - - - - - - -
96. cyb561a3b ENSDARG00000028257 60 0.783 - - - - - 0.783 - - - cytochrome b561 family, member A3b [Source:ZFIN;Acc:ZDB-GENE-091204-222]
97. ak5l ENSDARG00000017739 1058 0.782 - 0.782 - - - - - - - adenylate kinase 5, like [Source:ZFIN;Acc:ZDB-GENE-050410-2]
98. CR848045.1 CR848045.1 459 0.782 - - - - - 0.782 - - -
99. zgc:113385 zgc:113385 297 0.78 - - - - - - - 0.780 -
100. ogdhb ENSDARG00000103428 63 0.778 - 0.778 - - - - - - - oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-090311-8]

There are 318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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