Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox19a

Gene Name Gene ID Reads Annotation
sox19a ENSDARG00000010770, ENSDARG00000110497 4683 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]










Genes with expression patterns similar to sox19a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
2. her2 ENSDARG00000038205 3219 4.425 0.907 - - - - 0.792 0.987 0.855 0.884 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
3. pou3f3a ENSDARG00000042032 2835 4.12 0.737 - - - 0.727 0.865 0.934 - 0.857 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
4. tmpob ENSDARG00000022978 8121 3.829 0.772 - 0.743 - - 0.727 0.884 - 0.703 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
5. hnrnpub ENSDARG00000004735 16496 3.829 0.727 - - - - 0.822 0.836 0.701 0.743 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
6. plp1a ENSDARG00000103732 3544 3.638 0.846 - - - 0.950 0.867 0.975 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
7. nkx6.2 ENSDARG00000104735 5081 3.565 0.750 0.994 - - - 0.836 0.985 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
8. msi1 ENSDARG00000010710 2634 3.554 0.821 - 0.788 - - 0.964 0.981 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
9. scrt2 ENSDARG00000056175 4331 3.523 0.833 - - 0.877 - 0.867 0.946 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
10. dbx2 2971 3.52 0.839 - - - 0.950 0.747 0.984 - - developing brain homeobox 2
11. C8H1orf106 C8H1orf106 2690 3.505 0.865 - - - - 0.868 0.927 - 0.845
12. pcdh1gc5 ENSDARG00000104826 10052 3.487 0.892 - 0.764 - - 0.859 0.972 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
13. clstn1 ENSDARG00000031720 5286 3.487 0.855 - - - 0.890 0.813 0.929 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
14. ZFHX3 ENSDARG00000103057 7759 3.445 0.855 - 0.741 - - 0.901 0.948 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
15. gsx1 ENSDARG00000035735 1243 3.442 - - - - - 0.797 0.983 0.855 0.807 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
16. dbx1a ENSDARG00000086393 3161 3.431 0.728 - - - - 0.931 0.895 0.877 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
17. her4.3 ENSDARG00000070770 613 3.429 0.844 - - - - 0.885 0.930 0.770 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
18. mllt11 ENSDARG00000071026 2518 3.415 0.811 - - - - 0.856 0.936 0.812 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
19. notch1b ENSDARG00000052094 7874 3.399 - - 0.821 0.874 - 0.734 0.970 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
20. fyna ENSDARG00000011370 1679 3.399 0.853 - - - - 0.903 0.929 0.714 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
21. C7H4orf48 C7H4orf48 1455 3.396 0.754 - - - 0.948 0.793 0.901 - -
22. hmgb1b ENSDARG00000030479 10398 3.394 0.747 - 0.793 - - 0.922 0.932 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
23. prdm12b ENSDARG00000007430 914 3.387 0.713 - - - - 0.947 0.956 - 0.771 PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
24. tmem35 ENSDARG00000052567 5685 3.365 0.738 - - - - 0.938 0.943 0.746 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
25. tox ENSDARG00000032317 9126 3.363 0.809 - - - - 0.823 0.965 - 0.766 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
26. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 3.319 0.881 - - - - 0.858 0.851 - 0.729 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
27. vezf1a ENSDARG00000008247 1449 3.307 - - - - - 0.865 0.838 0.790 0.814 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
28. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.291 0.758 - - - 0.864 0.957 - - 0.712 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
29. pou3f2a ENSDARG00000070220 817 3.287 - - - - - 0.817 0.964 0.750 0.756 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
30. cspg5a ENSDARG00000069981 1699 3.285 0.799 - - - - 0.733 0.964 0.789 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
31. fzd3a ENSDARG00000021664 1958 3.264 0.919 - 0.721 - - 0.715 0.909 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
32. dpysl5a ENSDARG00000011141 1827 3.248 0.838 - - - - 0.701 0.985 0.724 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
33. scube2 ENSDARG00000037362 2833 3.246 0.776 0.989 - - - 0.745 0.736 - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
34. cdkn1c cdkn1c 17427 3.188 0.767 0.888 - - 0.707 - 0.826 - -
35. CABZ01028287.1 CABZ01028287.1 626 3.185 0.779 - - - - 0.837 0.800 - 0.769
36. fam60al 2846 3.184 0.778 - - - - 0.844 0.827 0.735 - family with sequence similarity 60, member A, like
37. fez1 ENSDARG00000023174 701 3.182 0.757 - - - - 0.806 0.894 0.725 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
38. dync1i1 ENSDARG00000060948 554 3.153 0.725 - - - - 0.830 0.883 - 0.715 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
39. zic4 ENSDARG00000031307 1228 3.093 - - 0.708 - - 0.750 0.858 - 0.777 zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
40. whsc1l1 8544 2.959 - - - - - 0.783 0.742 0.709 0.725 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
41. neurog1 ENSDARG00000056130 3924 2.866 0.924 - - - - 0.948 0.994 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
42. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.863 0.916 - - - - 0.969 0.978 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
43. nova2 ENSDARG00000017673 7685 2.844 0.908 - - - - 0.950 0.986 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
44. gfap ENSDARG00000025301 5584 2.841 0.917 - - - - 0.931 0.993 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
45. slc18a3a ENSDARG00000006356 1285 2.813 0.844 - - - - 0.976 0.993 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
46. nes ENSDARG00000088805 2710 2.792 0.878 - - - - 0.952 0.962 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
47. AGO1 ENSDARG00000092644 4521 2.787 0.877 - - - - 0.931 0.979 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
48. vim ENSDARG00000010008 3551 2.774 0.938 - - - - 0.933 0.903 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
49. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.764 0.909 - - - - 0.876 0.979 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
50. dla ENSDARG00000010791 9281 2.764 0.943 - - - - - 0.996 - 0.825 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
51. chat chat 463 2.759 0.799 - - - - 0.963 0.997 - -
52. myt1b ENSDARG00000102879 5411 2.757 0.840 - - - - 0.940 0.977 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
53. nadl1.1 1200 2.746 0.875 - - - - 0.909 0.962 - - neural adhesion molecule L1.1, transcript variant X1
54. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.741 - - - - 0.881 0.933 0.927 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
55. tuba1c ENSDARG00000055216 8384 2.736 0.878 - - - - 0.875 0.983 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
56. EFCC1 ENSDARG00000077826 1359 2.734 0.935 - - - - 0.891 0.908 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
57. TUBA1A ENSDARG00000001889 25294 2.732 0.805 - - - - 0.944 0.983 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
58. CU928222.1 ENSDARG00000097436 1662 2.727 0.856 - - - - 0.907 0.964 - -
59. pax6a ENSDARG00000103379 3061 2.726 0.871 - - - - 0.895 0.960 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
60. epha4b ENSDARG00000011600 3110 2.726 0.895 - - - - 0.877 0.954 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
61. si:ch73-21g5.7 ENSDARG00000093156 9412 2.725 0.933 - - - - 0.797 0.995 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
62. UBE2QL1 ENSDARG00000079276 3474 2.719 0.887 - - - - 0.910 0.922 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
63. stx1b ENSDARG00000000503 2724 2.718 0.841 - - - - 0.895 0.982 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
64. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.712 0.814 - - - - 0.907 0.991 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
65. tmie ENSDARG00000069423 305 2.712 0.886 - - - - 0.842 0.984 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
66. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.711 0.843 - - - - 0.887 0.981 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
67. si:dkey-169l5.3 si:dkey-169l5.3 239 2.71 0.868 - - - - 0.864 0.978 - -
68. EPB41L1 EPB41L1 1896 2.705 0.865 - - - - 0.888 0.952 - -
69. mir10d-1 mir10d-1 860 2.702 0.901 - - - - 0.859 0.942 - -
70. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.698 0.845 - - - - 0.905 0.948 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
71. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.693 0.877 - - - - 0.824 0.992 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
72. vgf ENSDARG00000105529 247 2.687 0.862 - - - - 0.857 0.968 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
73. atp6v0cb ENSDARG00000036577 3472 2.683 0.790 - - - - 0.901 0.992 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
74. FP016176.1 FP016176.1 7030 2.681 - - - - 0.872 0.899 0.910 - -
75. hoxa5a ENSDARG00000102501 1667 2.679 0.924 - - - - 0.895 0.860 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
76. irx1b ENSDARG00000056594 2224 2.675 0.827 - - - - 0.857 0.991 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
77. CHL1 CHL1 1553 2.67 0.863 - - - - 0.874 0.933 - -
78. nrarpb ENSDARG00000018958 6225 2.67 0.803 - - - - 0.885 0.982 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
79. SLC5A7 SLC5A7 453 2.663 0.831 - - - - 0.857 0.975 - -
80. sox19b ENSDARG00000040266 532 2.662 0.867 - - - - 0.858 0.937 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
81. notch3 ENSDARG00000052139 15033 2.651 - 0.973 - - 0.740 0.938 - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
82. kcnc3a ENSDARG00000055855 1821 2.645 0.831 - - - - 0.843 0.971 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
83. slc8a2b ENSDARG00000100592 598 2.64 0.892 - - - - 0.755 0.993 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
84. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.637 0.786 - - 0.868 - - 0.983 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
85. BX957337.1 BX957337.1 1685 2.633 0.831 - - - - 0.830 0.972 - -
86. clstn3 ENSDARG00000073883 590 2.628 0.808 - - - - 0.867 0.953 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
87. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.627 0.761 - - - - 0.882 0.984 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
88. ctnnd2b ENSDARG00000003779 964 2.623 0.817 - - - - 0.830 0.976 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
89. ncana 1537 2.621 0.852 - - - - 0.844 0.925 - - neurocan a
90. ckbb ENSDARG00000043257 3503 2.621 0.868 - - - - 0.868 0.885 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
91. SEMA7A ENSDARG00000078707 465 2.617 0.791 - - - - 0.889 0.937 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
92. SPOCK1 ENSDARG00000074644 794 2.61 0.812 - - - - 0.815 0.983 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
93. CABZ01111990.1 CABZ01111990.1 4374 2.608 0.774 - - - - 0.852 0.982 - -
94. elavl3 ENSDARG00000014420 8644 2.606 - - - - 0.743 0.885 0.978 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
95. chga ENSDARG00000008829 1086 2.606 0.798 - - - - 0.850 0.958 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
96. skib ENSDARG00000008034 6518 2.604 - - - 0.877 - 0.858 0.869 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
97. map7d2a ENSDARG00000068480 513 2.603 0.801 - - - - 0.869 0.933 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
98. dnajc5aa ENSDARG00000042948 2885 2.598 0.769 - - - - 0.855 0.974 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
99. ADAM22 ENSDARG00000060532 2259 2.598 - - - 0.875 - 0.743 0.980 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
100. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.597 - - - - - 0.909 0.983 0.705 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]

There are 2238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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