Zebrafish data search
Results for sox11b
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| sox11b | ENSDARG00000095743 | 8 | SRY (sex determining region Y)-box 11b [Source:ZFIN;Acc:ZDB-GENE-980526-466] |
Genes with expression patterns similar to sox11b
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | sox11b | ENSDARG00000095743 | 8 | 4 | - | - | 1.000 | 1.000 | - | - | - | 1.000 | 1.000 | SRY (sex determining region Y)-box 11b [Source:ZFIN;Acc:ZDB-GENE-980526-466] |
| 2. | FGFBP1 | FGFBP1 | 7 | 1.518 | - | - | 0.769 | 0.749 | - | - | - | - | - | |
| 3. | slc17a8 | ENSDARG00000057728, ENSDARG00000109791 | 8 | 1.512 | - | - | 0.786 | 0.726 | - | - | - | - | - | solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416] |
| 4. | si:dkey-191j3.2 | ENSDARG00000101997 | 1 | 1.5 | - | - | 0.769 | - | - | - | - | 0.731 | - | si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55] |
| 5. | si:ch211-285c6.2 | ENSDARG00000079234 | 1 | 1.5 | - | - | 0.769 | - | - | - | - | 0.731 | - | si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168] |
| 6. | PSKH2 | PSKH2 | 1 | 1.5 | - | - | 0.769 | - | - | - | - | 0.731 | - | |
| 7. | si:dkey-11f4.20 | ENSDARG00000100887 | 38 | 1.495 | - | - | 0.769 | 0.726 | - | - | - | - | - | si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359] |
| 8. | CT025771.1 | ENSDARG00000117721 | 13 | 1.477 | - | - | - | 0.726 | - | - | - | - | 0.751 | |
| 9. | otomp | ENSDARG00000040306 | 682 | 1.455 | - | - | 0.742 | 0.713 | - | - | - | - | - | otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1] |
| 10. | gsc | ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 | 152 | 1.447 | - | - | 0.706 | 0.741 | - | - | - | - | - | goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060] |
| 11. | CABZ01044356.1 | CABZ01044356.1 | 36 | 0.99 | - | - | - | 0.990 | - | - | - | - | - | |
| 12. | ONECUT3 | ONECUT3 | 2 | 0.977 | - | - | 0.977 | - | - | - | - | - | - | |
| 13. | CABZ01045617.2 | CABZ01045617.2 | 13 | 0.977 | - | - | 0.977 | - | - | - | - | - | - | |
| 14. | si:dkey-65b12.13 | si:dkey-65b12.13 | 7 | 0.95 | - | - | - | 0.950 | - | - | - | - | - | |
| 15. | myhb | ENSDARG00000001993 | 11 | 0.95 | - | - | - | 0.950 | - | - | - | - | - | myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1] |
| 16. | EIF4G3 | EIF4G3 | 24 | 0.95 | - | - | - | 0.950 | - | - | - | - | - | |
| 17. | si:rp71-18l21.1 | si:rp71-18l21.1 | 2 | 0.95 | - | - | - | 0.950 | - | - | - | - | - | |
| 18. | si:ch211-197e7.8 | si:ch211-197e7.8 | 4 | 0.95 | - | - | - | 0.950 | - | - | - | - | - | |
| 19. | tatdn2 | ENSDARG00000070618 | 10 | 0.945 | - | - | - | 0.945 | - | - | - | - | - | TatD DNase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081022-51] |
| 20. | DNAJC14 | ENSDARG00000105398 | 20 | 0.944 | - | - | 0.944 | - | - | - | - | - | - | DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7] |
| 21. | fgfbp2 | fgfbp2 | 14 | 0.931 | - | - | - | 0.931 | - | - | - | - | - | |
| 22. | si:dkey-10g2.4 | si:dkey-10g2.4 | 0 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | |
| 23. | akap10 | ENSDARG00000059549 | 1 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535] |
| 24. | CABZ01074397.1 | ENSDARG00000104672 | 2 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | NACHT, LRR and PYD domains-containing protein 3-like [Source:NCBI gene;Acc:100535428] |
| 25. | PRKCA | ENSDARG00000099841 | 2 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393] |
| 26. | zgc:173716 | 9 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | zgc:173716 | |
| 27. | ftr43 | ENSDARG00000076106 | 2 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8] |
| 28. | fam219b | ENSDARG00000104637 | 3 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82] |
| 29. | si:dkeyp-73d8.8 | ENSDARG00000094045 | 17 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684] |
| 30. | si:dkey-20i20.7 | ENSDARG00000093562 | 0 | 0.93 | - | - | 0.930 | - | - | - | - | - | - | si:dkey-20i20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-906] |
| 31. | si:dkey-30f3.2 | ENSDARG00000098087 | 6 | 0.918 | - | - | - | 0.918 | - | - | - | - | - | si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70] |
| 32. | ms4a17a.1 | ENSDARG00000043798 | 7 | 0.909 | - | - | 0.909 | - | - | - | - | - | - | membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307] |
| 33. | U1_33 | U1_33 | 76 | 0.856 | - | - | - | - | - | - | - | - | 0.856 | |
| 34. | rhoab | ENSDARG00000094673 | 26 | 0.849 | - | - | - | 0.849 | - | - | - | - | - | ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2] |
| 35. | trh | ENSDARG00000006868 | 31 | 0.848 | - | - | 0.848 | - | - | - | - | - | - | thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1] |
| 36. | lzts1 | ENSDARG00000075565 | 23 | 0.844 | - | - | - | - | - | - | - | - | 0.844 | leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431] |
| 37. | dmbx1a | ENSDARG00000009922 | 284 | 0.832 | - | - | - | - | - | - | - | - | 0.832 | diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1] |
| 38. | CABZ01072950.1 | ENSDARG00000114879 | 2 | 0.825 | - | - | - | - | - | - | - | - | 0.825 | |
| 39. | irx7 | ENSDARG00000002601 | 72 | 0.823 | - | - | - | - | - | - | - | - | 0.823 | iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1] |
| 40. | SDR42E2 | ENSDARG00000059914 | 132 | 0.822 | - | - | 0.822 | - | - | - | - | - | - | short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3] |
| 41. | espnla | ENSDARG00000078211 | 8 | 0.813 | - | - | 0.813 | - | - | - | - | - | - | espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3] |
| 42. | ankdd1a | ENSDARG00000098647 | 8 | 0.812 | - | - | 0.812 | - | - | - | - | - | - | ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8] |
| 43. | AL935186.3 | ENSDARG00000109223 | 19 | 0.81 | - | - | - | - | - | - | - | 0.810 | - | |
| 44. | itm1 | itm1 | 32 | 0.809 | - | - | - | - | - | - | - | - | 0.809 | |
| 45. | si:dkey-30c15.12 | ENSDARG00000058546 | 12 | 0.806 | - | - | 0.806 | - | - | - | - | - | - | si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920] |
| 46. | rhpn1 | ENSDARG00000052454 | 3 | 0.797 | - | - | - | 0.797 | - | - | - | - | - | rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79] |
| 47. | bend5 | ENSDARG00000075624 | 10 | 0.797 | - | - | - | - | - | - | - | - | 0.797 | BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460] |
| 48. | slc39a4 | ENSDARG00000059361 | 10 | 0.797 | - | - | - | 0.797 | - | - | - | - | - | solute carrier family 39 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-060315-8] |
| 49. | RNF14 | ENSDARG00000043905 | 41 | 0.795 | - | - | - | - | - | - | - | - | 0.795 | ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65] |
| 50. | traf7 | ENSDARG00000060207 | 20 | 0.795 | - | - | 0.795 | - | - | - | - | - | - | TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212] |
| 51. | CU179643.1 | ENSDARG00000086489 | 25 | 0.792 | - | - | - | 0.792 | - | - | - | - | - | |
| 52. | fgf18b | ENSDARG00000043962, ENSDARG00000112937 | 29 | 0.792 | - | - | 0.792 | - | - | - | - | - | - | fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4] |
| 53. | GPR153 | ENSDARG00000087601 | 48 | 0.791 | - | - | 0.791 | - | - | - | - | - | - | G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7] |
| 54. | BX255895.1 | BX255895.1 | 29 | 0.787 | - | - | - | - | - | - | - | - | 0.787 | |
| 55. | PLIN3 | PLIN3 | 29 | 0.786 | - | - | - | - | - | - | - | - | 0.786 | |
| 56. | polr2b | ENSDARG00000098783 | 90 | 0.785 | - | - | - | - | - | - | - | - | 0.785 | polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1] |
| 57. | gnat1 | ENSDARG00000044199 | 251 | 0.781 | - | - | - | - | - | - | - | - | 0.781 | guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11] |
| 58. | si:dkey-222o15.5 | si:dkey-222o15.5 | 27 | 0.78 | - | - | - | - | - | - | - | - | 0.780 | |
| 59. | zgc:103625 | ENSDARG00000038770 | 17 | 0.779 | - | - | - | - | - | - | - | - | 0.779 | zgc:103625 [Source:ZFIN;Acc:ZDB-GENE-040912-116] |
| 60. | CR352265.1 | ENSDARG00000062758 | 39 | 0.779 | - | - | 0.779 | - | - | - | - | - | - | |
| 61. | DXO | ENSDARG00000036852 | 16 | 0.778 | - | - | - | - | - | - | - | - | 0.778 | decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992] |
| 62. | ACAP2 | ENSDARG00000060783 | 9 | 0.775 | - | - | - | - | - | - | - | - | 0.775 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640] |
| 63. | si:ch211-245j22.3 | ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 | 3 | 0.775 | - | - | - | - | - | - | - | - | 0.775 | si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38] |
| 64. | SLC39A14 | ENSDARG00000102387 | 4 | 0.775 | - | - | - | - | - | - | - | - | 0.775 | solute carrier family 39 (zinc transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-060315-2] |
| 65. | si:ch1073-416j23.1 | ENSDARG00000055934 | 4 | 0.775 | - | - | - | - | - | - | - | - | 0.775 | si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35] |
| 66. | dio3a | 19 | 0.77 | - | - | - | - | - | - | - | 0.770 | - | deiodinase, iodothyronine, type IIIa | |
| 67. | zgc:174311 | zgc:174311 | 3 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 68. | si:dkey-16j24.1 | 2 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | si:dkey-16j24.1, transcript variant X1 | |
| 69. | CU138503.2 | CU138503.2 | 0 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 70. | CABZ01087111.1 | CABZ01087111.1 | 42 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 71. | hsf5 | ENSDARG00000104686 | 9 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42] |
| 72. | nkd3_1 | ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63] |
| 73. | CU468041.1 | ENSDARG00000092125 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 74. | si:dkey-148a12.2 | si:dkey-148a12.2 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 75. | hbaa2 | ENSDARG00000069735 | 10 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38] |
| 76. | si:dkey-211e20.3 | si:dkey-211e20.3 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 77. | gata2b | ENSDARG00000009094 | 16 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440] |
| 78. | fn3krp | ENSDARG00000098208 | 4 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192] |
| 79. | si:dkey-165g20.2 | si:dkey-165g20.2 | 3 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 80. | si:dkey-26i24.1 | ENSDARG00000102673 | 4 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88] |
| 81. | si:rp71-7l19.7 | si:rp71-7l19.7 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 82. | zgc:162322 | zgc:162322 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 83. | si:ch211-274f20.4 | si:ch211-274f20.4 | 0 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 84. | ralgps1 | ENSDARG00000068370 | 39 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16] |
| 85. | CR356247.1 | CR356247.1 | 2 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 86. | CR855307.2 | CR855307.2 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 87. | KCNJ3_1 | KCNJ3_1 | 30 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 88. | si:ch73-36i7.2 | si:ch73-36i7.2 | 5 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 89. | kcnq3 | ENSDARG00000060085 | 0 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301] |
| 90. | SNORA53 | SNORA53 | 10 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 91. | CABZ01079302.1 | ENSDARG00000103230 | 2 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 92. | zgc:114037_5 | 6 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | zgc:114037 | |
| 93. | U4_1 | U4_1 | 2 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 94. | STOX2 | STOX2 | 0 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 95. | CU695076.1 | CU695076.1 | 7 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 96. | zgc:174642_2 | zgc:174642_2 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 97. | si:rp71-1h20.2 | si:rp71-1h20.2 | 0 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 98. | mxd | ENSDARG00000023369 | 8 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8] |
| 99. | CR536621.1 | CR536621.1 | 2 | 0.769 | - | - | 0.769 | - | - | - | - | - | - | |
| 100. | CR626884.3 | ENSDARG00000104648 | 1 | 0.769 | - | - | 0.769 | - | - | - | - | - | - |
There are 321 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA