Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox11a

Gene Name Gene ID Reads Annotation
sox11a ENSDARG00000077811 25 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]










Genes with expression patterns similar to sox11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox11a ENSDARG00000077811 25 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
2. BEND2 BEND2 92 2.256 0.704 0.761 0.791 - - - - - -
3. si:ch211-219a15.3 ENSDARG00000087659 12 2 1.000 - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
4. uts1 ENSDARG00000014927 35 2 1.000 - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
5. cnn1a ENSDARG00000017193 6 1.947 1.000 0.947 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
6. cldn10l2 ENSDARG00000105042 11 1.936 - 0.936 - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
7. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.936 1.000 - - - 0.936 - - - -
8. trpc2 trpc2 10 1.897 1.000 - - 0.897 - - - - -
9. BEND2_1 BEND2_1 45 1.893 1.000 0.893 - - - - - - -
10. pdk3a ENSDARG00000014527 15 1.872 - - 0.872 - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
11. fastkd1 ENSDARG00000056128 141 1.87 1.000 0.870 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
12. KLHL29_1 KLHL29_1 158 1.87 - 1.000 - - 0.870 - - - -
13. gas5 279 1.853 1.000 - - - - 0.853 - - - growth arrest-specific 5, transcript variant X4
14. chmp6b ENSDARG00000102024 37 1.846 - - - - 0.915 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
15. si:dkey-233e3.1 si:dkey-233e3.1 7 1.842 - - - 0.902 - 0.940 - - -
16. nr5a1a ENSDARG00000103176 12 1.834 1.000 - - - - 0.834 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
17. evx2 ENSDARG00000059255 317 1.816 - 1.000 - 0.816 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
18. gcshb ENSDARG00000105187 182 1.811 1.000 - - - 0.811 - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
19. RIMBP2_1 RIMBP2_1 57 1.794 1.000 - - 0.794 - - - - -
20. BX927369.1 ENSDARG00000105047 21 1.793 1.000 0.793 - - - - - - -
21. RDM1 RDM1 28 1.761 - 0.947 - - - 0.814 - - -
22. DUSP23 DUSP23 121 1.759 1.000 - - - - 0.759 - - -
23. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 1.000 - - - - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
24. si:busm1-266f07.2 ENSDARG00000031745 19 1.741 - 0.888 - - - 0.853 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
25. si:dkey-29d8.3 ENSDARG00000091879 21 1.732 0.732 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
26. CR854827.2 ENSDARG00000097227 15 1.731 - - 0.864 - - 0.867 - - -
27. cyb5d1 ENSDARG00000056007 67 1.725 - - - - 0.820 0.905 - - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
28. shq1 ENSDARG00000058522 123 1.725 0.956 - - - 0.769 - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
29. si:dkey-256i11.2 ENSDARG00000093713 102 1.723 - - - - 0.900 0.823 - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
30. lpcat2 ENSDARG00000053010 137 1.72 - 0.778 - - - 0.942 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
31. CR388013.3 CR388013.3 45 1.706 1.000 - - - - 0.706 - - -
32. cog1 ENSDARG00000105131 35 1.698 - 0.793 - - - 0.905 - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
33. CABZ01069519.1 CABZ01069519.1 64 1.653 0.749 0.904 - - - - - - -
34. poc5 ENSDARG00000059982 569 1.652 0.758 - - - - 0.894 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
35. si:dkey-208k4.1 si:dkey-208k4.1 15 1.651 - - 0.835 - 0.816 - - - -
36. si:ch211-57i17.2 ENSDARG00000093354 58 1.648 - - - - 0.922 0.726 - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
37. abhd12 ENSDARG00000071004 47 1.646 - 0.888 - - - 0.758 - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
38. slc51a ENSDARG00000045306 33 1.645 - 0.936 - - - - - - 0.709 solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
39. antxr1a ENSDARG00000025672 32 1.639 0.732 - - - 0.907 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
40. cnr1 ENSDARG00000009020 33 1.629 - 0.882 - - 0.747 - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
41. 5S_rRNA_20 5S_rRNA_20 79 1.626 - - - - 0.903 0.723 - - -
42. C23H1orf192 C23H1orf192 60 1.624 - 0.757 - - - 0.867 - - -
43. si:ch211-155o21.4 ENSDARG00000096567 25 1.6 - 0.747 - - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
44. RETSAT ENSDARG00000070140 36 1.597 - 0.733 - - - 0.864 - - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
45. BX511257.1 BX511257.1 66 1.59 0.723 - - - - 0.867 - - -
46. CU302436.1_1 ENSDARG00000114500 18 1.588 - 0.765 - - - 0.823 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
47. fabp11a ENSDARG00000017299 167 1.528 - 0.746 - 0.782 - - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
48. shox ENSDARG00000025891 338 1.51 - - - 0.748 - 0.762 - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
49. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.449 - - 0.748 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
50. rragd ENSDARG00000006279 75 1.444 - 0.741 - - - 0.703 - - - ras-related GTP binding D [Source:ZFIN;Acc:ZDB-GENE-070620-6]
51. COL9A3 ENSDARG00000037845 1 1 - 1.000 - - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
52. zgc:171626 zgc:171626 42 1 1.000 - - - - - - - -
53. tbc1d22b ENSDARG00000026988 18 1 - 1.000 - - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
54. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
55. rx3 ENSDARG00000052893 43 1 1.000 - - - - - - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
56. zgc:165481 ENSDARG00000060092 95 1 - 1.000 - - - - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
57. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
58. MFAP4_6 MFAP4_6 162 1 - 1.000 - - - - - - -
59. pik3r5 ENSDARG00000102762 56 1 - 1.000 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
60. card9 ENSDARG00000067672 33 1 - 1.000 - - - - - - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
61. si:rp71-1f1.4 ENSDARG00000092476 11 1 1.000 - - - - - - - - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
62. syce2 ENSDARG00000103187 12 1 1.000 - - - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
63. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 1.000 - - - - - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
64. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
65. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
66. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
67. atrnl1a ENSDARG00000077188 66 1 1.000 - - - - - - - - attractin-like 1a [Source:ZFIN;Acc:ZDB-GENE-081028-60]
68. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
69. BIN1 BIN1 11 1 1.000 - - - - - - - -
70. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
71. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
72. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
73. celsr2l celsr2l 1 1 1.000 - - - - - - - -
74. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - 1.000 - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
75. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
76. si:ch211-284e13.11 ENSDARG00000091997 3 1 - 1.000 - - - - - - - si:ch211-284e13.11 [Source:ZFIN;Acc:ZDB-GENE-060526-157]
77. hspbap1 ENSDARG00000033771 41 1 1.000 - - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
78. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
79. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
80. si:dkey-148a12.2 si:dkey-148a12.2 1 1 1.000 - - - - - - - -
81. scpp8 ENSDARG00000093124 54 1 - 1.000 - - - - - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
82. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
83. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
84. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
85. ZNF135_1 ZNF135_1 1 1 1.000 - - - - - - - -
86. radil ENSDARG00000079779 14 1 - 1.000 - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
87. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
88. zgc:110434 21 1 1.000 - - - - - - - - zgc:110434
89. si:dkey-35m8.1 ENSDARG00000094587 0 1 1.000 - - - - - - - - si:dkey-35m8.1 [Source:ZFIN;Acc:ZDB-GENE-060526-296]
90. SPTBN4 ENSDARG00000092624 6 1 - 1.000 - - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
91. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
92. ABCC3 ENSDARG00000096662 15 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
93. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 1.000 - - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
94. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - 1.000 - - - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
95. COX5B ENSDARG00000015978 70 1 - 1.000 - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
96. CABZ01078431.1 CABZ01078431.1 183 1 1.000 - - - - - - - -
97. TMEM245 ENSDARG00000070455 85 1 1.000 - - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
98. grm1a ENSDARG00000026796 9 1 1.000 - - - - - - - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
99. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
100. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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