Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox11a

Gene Name Gene ID Reads Annotation
sox11a ENSDARG00000077811 25 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]










Genes with expression patterns similar to sox11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox11a ENSDARG00000077811 25 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
2. BEND2 BEND2 92 2.256 0.704 0.761 0.791 - - - - - -
3. si:ch211-219a15.3 ENSDARG00000087659 12 2 1.000 - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
4. uts1 ENSDARG00000014927 35 2 1.000 - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
5. cnn1a ENSDARG00000017193 6 1.947 1.000 0.947 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
6. cldn10l2 ENSDARG00000105042 11 1.936 - 0.936 - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
7. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1.936 1.000 - - - 0.936 - - - -
8. trpc2 trpc2 10 1.897 1.000 - - 0.897 - - - - -
9. BEND2_1 BEND2_1 45 1.893 1.000 0.893 - - - - - - -
10. pdk3a ENSDARG00000014527 15 1.872 - - 0.872 - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
11. KLHL29_1 KLHL29_1 158 1.87 - 1.000 - - 0.870 - - - -
12. fastkd1 ENSDARG00000056128 141 1.87 1.000 0.870 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
13. gas5 279 1.853 1.000 - - - - 0.853 - - - growth arrest-specific 5, transcript variant X4
14. chmp6b ENSDARG00000102024 37 1.846 - - - - 0.915 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
15. si:dkey-233e3.1 si:dkey-233e3.1 7 1.842 - - - 0.902 - 0.940 - - -
16. nr5a1a ENSDARG00000103176 12 1.834 1.000 - - - - 0.834 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
17. evx2 ENSDARG00000059255 317 1.816 - 1.000 - 0.816 - - - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
18. gcshb ENSDARG00000105187 182 1.811 1.000 - - - 0.811 - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
19. RIMBP2_1 RIMBP2_1 57 1.794 1.000 - - 0.794 - - - - -
20. BX927369.1 ENSDARG00000105047 21 1.793 1.000 0.793 - - - - - - -
21. RDM1 RDM1 28 1.761 - 0.947 - - - 0.814 - - -
22. DUSP23 DUSP23 121 1.759 1.000 - - - - 0.759 - - -
23. si:ch211-208f21.2 ENSDARG00000094177 61 1.754 1.000 - - - - 0.754 - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
24. si:busm1-266f07.2 ENSDARG00000031745 19 1.741 - 0.888 - - - 0.853 - - - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
25. si:dkey-29d8.3 ENSDARG00000091879 21 1.732 0.732 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
26. CR854827.2 ENSDARG00000097227 15 1.731 - - 0.864 - - 0.867 - - -
27. cyb5d1 ENSDARG00000056007 67 1.725 - - - - 0.820 0.905 - - - cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
28. shq1 ENSDARG00000058522 123 1.725 0.956 - - - 0.769 - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
29. si:dkey-256i11.2 ENSDARG00000093713 102 1.723 - - - - 0.900 0.823 - - - si:dkey-256i11.2 [Source:ZFIN;Acc:ZDB-GENE-110913-47]
30. lpcat2 ENSDARG00000053010 137 1.72 - 0.778 - - - 0.942 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
31. CR388013.3 CR388013.3 45 1.706 1.000 - - - - 0.706 - - -
32. cog1 ENSDARG00000105131 35 1.698 - 0.793 - - - 0.905 - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
33. CABZ01069519.1 CABZ01069519.1 64 1.653 0.749 0.904 - - - - - - -
34. poc5 ENSDARG00000059982 569 1.652 0.758 - - - - 0.894 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
35. si:dkey-208k4.1 si:dkey-208k4.1 15 1.651 - - 0.835 - 0.816 - - - -
36. si:ch211-57i17.2 ENSDARG00000093354 58 1.648 - - - - 0.922 0.726 - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
37. abhd12 ENSDARG00000071004 47 1.646 - 0.888 - - - 0.758 - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
38. slc51a ENSDARG00000045306 33 1.645 - 0.936 - - - - - - 0.709 solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
39. antxr1a ENSDARG00000025672 32 1.639 0.732 - - - 0.907 - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
40. cnr1 ENSDARG00000009020 33 1.629 - 0.882 - - 0.747 - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
41. 5S_rRNA_20 5S_rRNA_20 79 1.626 - - - - 0.903 0.723 - - -
42. C23H1orf192 C23H1orf192 60 1.624 - 0.757 - - - 0.867 - - -
43. si:ch211-155o21.4 ENSDARG00000096567 25 1.6 - 0.747 - - - 0.853 - - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
44. RETSAT ENSDARG00000070140 36 1.597 - 0.733 - - - 0.864 - - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
45. BX511257.1 BX511257.1 66 1.59 0.723 - - - - 0.867 - - -
46. CU302436.1_1 ENSDARG00000114500 18 1.588 - 0.765 - - - 0.823 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
47. fabp11a ENSDARG00000017299 167 1.528 - 0.746 - 0.782 - - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
48. shox ENSDARG00000025891 338 1.51 - - - 0.748 - 0.762 - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
49. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.449 - - 0.748 - - 0.701 - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
50. rragd ENSDARG00000006279 75 1.444 - 0.741 - - - 0.703 - - - ras-related GTP binding D [Source:ZFIN;Acc:ZDB-GENE-070620-6]
51. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
52. sdr42e1 ENSDARG00000098838 25 1 1.000 - - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
53. dnajb4 ENSDARG00000038978 56 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-192]
54. elovl4b ENSDARG00000027495 107 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
55. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
56. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
57. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
58. zgc:92161 ENSDARG00000101749 27 1 - 1.000 - - - - - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
59. MPP4 MPP4 1 1 1.000 - - - - - - - -
60. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
61. or111-2 ENSDARG00000025658 2 1 1.000 - - - - - - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
62. zgc:113397 zgc:113397 60 1 1.000 - - - - - - - -
63. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
64. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
65. gng2_1 ENSDARG00000056831 113 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
66. TPO 2 1 - 1.000 - - - - - - - thyroid peroxidase
67. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
68. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
69. BICD1 BICD1 9 1 - - - - - 1.000 - - -
70. si:ch211-190k17.19 ENSDARG00000095756 19 1 1.000 - - - - - - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
71. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
72. si:dkey-5n18.1 ENSDARG00000043436 220 1 - 1.000 - - - - - - - si:dkey-5n18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-144]
73. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
74. cadpsa ENSDARG00000043661 160 1 1.000 - - - - - - - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
75. SCARB2 SCARB2 24 1 1.000 - - - - - - - -
76. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
77. zswim7 ENSDARG00000067608 179 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
78. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
79. he1a 48624 1 - 1.000 - - - - - - - hatching enzyme 1a, transcript variant X1
80. CR942805.3 CR942805.3 7 1 1.000 - - - - - - - -
81. Mar-03 Mar-03 44 1 - 1.000 - - - - - - -
82. hamp2 hamp2 67 1 - 1.000 - - - - - - -
83. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
84. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
85. kcnh3 ENSDARG00000069560 4 1 - - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
86. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
87. 5S_rRNA_6 5S_rRNA_6 11 1 - 1.000 - - - - - - -
88. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1 1.000 - - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
89. rxfp3.2a 11 1 - 1.000 - - - - - - - relaxin/insulin-like family peptide receptor 3.2a
90. slc25a37 ENSDARG00000073743 31 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
91. FANCA ENSDARG00000098241 39 1 1.000 - - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
92. RNF122 RNF122 29 1 - 1.000 - - - - - - -
93. FBF1 FBF1 13 1 1.000 - - - - - - - -
94. si:dkey-239h2.4 si:dkey-239h2.4 0 1 1.000 - - - - - - - -
95. si:dkey-199m13.9 si:dkey-199m13.9 20 1 - 1.000 - - - - - - -
96. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
97. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
98. MIER3 MIER3 114 1 1.000 - - - - - - - -
99. tekt1 ENSDARG00000101331 27 1 1.000 - - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
100. dpyda dpyda 12 1 - 1.000 - - - - - - -

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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