Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sort1b

Gene Name Gene ID Reads Annotation
sort1b ENSDARG00000056252 2652 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]










Genes with expression patterns similar to sort1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sort1b ENSDARG00000056252 2652 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
2. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 2.861 0.987 0.988 0.886 - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
3. ivns1abpa ENSDARG00000031100 3806 2.838 - 0.990 0.934 - - 0.914 - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
4. cldnc ENSDARG00000015955 3196 2.623 0.940 0.982 - - - 0.701 - - - claudin c [Source:ZFIN;Acc:ZDB-GENE-010328-3]
5. plcd1b ENSDARG00000034080 4074 2.572 - - 0.875 - - - 0.833 - 0.864 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
6. nme3 ENSDARG00000100990 3889 2.567 - 0.998 - - - 0.752 - - 0.817 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
7. asap2b ENSDARG00000019564 1660 2.503 - - - - - 0.786 0.774 - 0.943 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
8. itgb1b.1 ENSDARG00000053232 4721 2.48 0.950 - - - - 0.746 0.784 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
9. b3gnt2b ENSDARG00000091902 4125 2.418 - - - - - 0.751 0.793 - 0.874 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
10. slc25a1b ENSDARG00000076381 6213 2.406 - - - - - 0.762 0.832 - 0.812 slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
11. umps ENSDARG00000012215 4564 2.381 0.932 - - - - 0.731 0.718 - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
12. SVIL SVIL 2589 2.357 - - - - - 0.791 0.720 - 0.846
13. pnp5a ENSDARG00000078619 1461 2.32 - - - - - - 0.744 0.750 0.826 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
14. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 2.311 - - - - - 0.708 0.768 - 0.835 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
15. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.959 0.982 - 0.977 - - - - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
16. dhx15 ENSDARG00000015392 7496 1.95 0.974 0.976 - - - - - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
17. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.95 - 0.996 0.954 - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
18. snx12 ENSDARG00000019060 9563 1.909 - 0.982 0.927 - - - - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
19. ing2 ENSDARG00000104907 1336 1.902 - 0.989 - - - - - - 0.913 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
20. stxbp2 ENSDARG00000007603 1646 1.892 0.989 - - - - - - - 0.903 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
21. arhgap24 ENSDARG00000100973 1105 1.887 - - 0.958 - - - - - 0.929 Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
22. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.871 0.947 - 0.924 - - - - - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
23. snrpa1 ENSDARG00000024651 3306 1.868 - 0.991 - - - - - - 0.877 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
24. epdl2 ENSDARG00000055539 1895 1.86 0.986 - - - - 0.874 - - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
25. si:dkey-199f5.8 ENSDARG00000018853 3249 1.857 0.993 - - - - - 0.864 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
26. srsf3b ENSDARG00000059360 14888 1.838 0.966 0.872 - - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
27. pck1 ENSDARG00000013522 1657 1.838 0.977 - - - - 0.861 - - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
28. suclg1 ENSDARG00000052712 17570 1.837 0.876 0.961 - - - - - - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
29. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.823 - - 0.941 - - - - - 0.882 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
30. BRK1 ENSDARG00000041974 6430 1.809 0.941 - 0.868 - - - - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
31. tor1 ENSDARG00000077950 1027 1.797 - - 0.968 - - 0.829 - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
32. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.786 0.868 0.918 - - - - - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
33. pard6b ENSDARG00000003865 990 1.782 - - 0.969 - - 0.813 - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
34. actr2a ENSDARG00000052438 5838 1.778 - 0.954 - - - - 0.824 - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
35. fbxo28 ENSDARG00000027159 9602 1.777 0.969 - - - - - 0.808 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
36. fga ENSDARG00000020741 5580 1.776 0.983 - - - - 0.793 - - - fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
37. pi4k2a ENSDARG00000033666 1257 1.775 - - 0.963 - - 0.812 - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
38. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.771 - - - - - 0.912 0.859 - - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
39. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.769 - 0.992 - - - - - - 0.777 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
40. BX571768.1 ENSDARG00000116980 711 1.769 - - 0.975 - - 0.794 - - -
41. daam1a ENSDARG00000015059 1460 1.767 - - - - - 0.848 - - 0.919 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
42. cebpd ENSDARG00000087303 2195 1.766 0.977 - - - - - 0.789 - - CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
43. eng1b eng1b 2544 1.761 - - 0.946 - - - - - 0.815
44. ubap1 ENSDARG00000058746 1049 1.76 - 0.997 - - - 0.763 - - - ubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
45. zgc:110339 ENSDARG00000046030 8180 1.759 0.860 0.899 - - - - - - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
46. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.753 - 0.958 0.795 - - - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
47. psph ENSDARG00000040314 1359 1.75 0.987 - - - - 0.763 - - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
48. hagh ENSDARG00000025338 2911 1.748 0.971 - - - - - 0.777 - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
49. bambib ENSDARG00000099677 4267 1.747 0.983 - - - - - 0.764 - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
50. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.746 - - 0.966 - - - 0.780 - - myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
51. lima1 lima1 4760 1.741 - - 0.917 - - - 0.824 - -
52. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.734 - - - - - - 0.788 - 0.946 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
53. ptpn1 ENSDARG00000007923 3647 1.727 - - 0.960 - - - - - 0.767 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
54. fuca1 fuca1 6176 1.725 0.951 - - - - - - - 0.774
55. zgc:158309 zgc:158309 2696 1.723 - - 0.965 - - 0.758 - - -
56. wasf2 ENSDARG00000024209 5338 1.718 0.971 - - - - - 0.747 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
57. cstf3 ENSDARG00000018904 6111 1.718 - 0.984 - - - - - - 0.734 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
58. plscr3b ENSDARG00000069432 8500 1.718 0.966 - - - - - 0.752 - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
59. tnfaip8l2b ENSDARG00000046148 1133 1.715 - - - - - - 0.786 - 0.929 tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
60. cyfip1 ENSDARG00000044345 5483 1.71 - - 0.926 - - - 0.784 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
61. zgc:158374 zgc:158374 2227 1.706 0.934 - - - - 0.772 - - -
62. srsf6a ENSDARG00000013729 8576 1.704 0.966 - - - - 0.738 - - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
63. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.7 - 0.988 - 0.712 - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
64. cd2ap ENSDARG00000015224 2830 1.699 - - - - - 0.826 - - 0.873 CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
65. DLC1 ENSDARG00000079317 2149 1.69 - - 0.951 - - 0.739 - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
66. rgrb ENSDARG00000098724 1546 1.686 0.952 - - - - 0.734 - - - retinal G protein coupled receptor b [Source:ZFIN;Acc:ZDB-GENE-050522-447]
67. si:dkey-69o16.5 ENSDARG00000070057 3628 1.685 0.887 - - - - 0.798 - - - si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
68. f13a1b ENSDARG00000036893 1644 1.677 0.975 - - - - 0.702 - - - coagulation factor XIII, A1 polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-9634]
69. atp6v1h ENSDARG00000006370 7028 1.67 0.904 - - - - - 0.766 - - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
70. dhdhl ENSDARG00000028336 844 1.669 - - - - - 0.866 0.803 - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
71. hspe1 ENSDARG00000056167 21636 1.669 0.947 0.722 - - - - - - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
72. arpc2 ENSDARG00000075989 22423 1.666 0.962 - - - - - 0.704 - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
73. cast ENSDARG00000058693 15565 1.661 0.923 - - - - - - - 0.738 calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
74. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.66 0.942 - - - - - 0.718 - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
75. sid4 sid4 1358 1.658 0.944 - - - - 0.714 - - -
76. cnbpa ENSDARG00000045776 8648 1.647 - 0.920 0.727 - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
77. suclg2 ENSDARG00000044914 7950 1.646 - - - - - 0.886 0.760 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
78. f10 ENSDARG00000088581 4968 1.64 - - - - - 0.841 0.799 - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
79. stk10 ENSDARG00000101894 1587 1.623 - - - - - - 0.728 - 0.895 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
80. si:ch73-234b20.5 ENSDARG00000086996, ENSDARG00000109882, ENSDARG00000111886 2759 1.62 - - - - - 0.810 0.810 - - si:ch73-234b20.5 [Source:ZFIN;Acc:ZDB-GENE-041008-183]
81. anxa2a ENSDARG00000003216 10684 1.62 - - - - - - 0.836 - 0.784 annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
82. pdcd6ip ENSDARG00000025269 2522 1.618 - - - - - - 0.777 - 0.841 programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
83. PCOLCE_1 PCOLCE_1 2148 1.618 - - - - - 0.802 0.816 - -
84. lmo7a ENSDARG00000004930 2414 1.617 - - - - - - 0.756 - 0.861 LIM domain 7a [Source:ZFIN;Acc:ZDB-GENE-030219-74]
85. cask cask 3384 1.614 - - - - - 0.808 0.806 - -
86. frem2b ENSDARG00000102626 1416 1.61 - - - - - 0.707 - - 0.903 Fras1 related extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-081119-4]
87. lrp1b lrp1b 3216 1.609 - - 0.831 - - 0.778 - - -
88. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 1.607 0.907 - - - - 0.700 - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
89. XPR1 XPR1 3354 1.601 - - - - - 0.711 - - 0.890
90. gna15.1 ENSDARG00000016364 754 1.597 - - - - - - 0.726 - 0.871 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
91. fdps ENSDARG00000040890 4000 1.597 - - - - - 0.808 0.789 - - farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [Source:ZFIN;Acc:ZDB-GENE-050506-78]
92. nt5c3a ENSDARG00000058597 14299 1.596 - - - - - 0.824 0.772 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
93. oaz1b ENSDARG00000104782 37623 1.593 0.708 - 0.885 - - - - - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
94. btbd10b ENSDARG00000020252 7251 1.593 - - - - - 0.740 0.853 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
95. gstt1a ENSDARG00000042428, ENSDARG00000110738 3098 1.592 - - - - - - 0.790 - 0.802 glutathione S-transferase theta 1a [Source:ZFIN;Acc:ZDB-GENE-031001-13]
96. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.592 - - - - - 0.809 0.783 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
97. CFP ENSDARG00000094451 852 1.591 - - - - - 0.791 0.800 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
98. cers2b ENSDARG00000058992 5319 1.591 0.871 - - - - 0.720 - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
99. ENSDARG00000086666 ENSDARG00000086666 2159 1.59 - - 0.800 - - - - - 0.790
100. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.589 - - - - - 0.812 0.777 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]

There are 1437 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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