Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for soga3a

Gene Name Gene ID Reads Annotation
soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]










Genes with expression patterns similar to soga3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
2. SSTR2 SSTR2 12 2 - - - 1.000 1.000 - - - -
3. lrch4 ENSDARG00000068258 24 2 1.000 - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
4. cmpk2 ENSDARG00000031359 1 2 - - - - 1.000 - - 1.000 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040724-24]
5. si:dkey-256i11.4 si:dkey-256i11.4 3 2 - 1.000 - - - - - 1.000 -
6. TRPC7 TRPC7 1 2 - - - 1.000 1.000 - - - -
7. BX470083.4 ENSDARG00000115059 8 2 - 1.000 - - - - - 1.000 -
8. CABZ01016604.1 CABZ01016604.1 12 2 - 1.000 - 1.000 - - - - -
9. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 2 - - - 1.000 1.000 - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
10. CST7 CST7 22 2 - 1.000 - - 1.000 - - - -
11. si:ch211-42d10.5 si:ch211-42d10.5 17 2 - 1.000 - - - - - 1.000 -
12. cd44a ENSDARG00000087863 4 2 - - - 1.000 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
13. CR936967.1 CR936967.1 2 2 1.000 - - - - - - 1.000 -
14. inpp5k inpp5k 2 2 - - - 1.000 1.000 - - - -
15. ONECUT2 ENSDARG00000090387 8 2 - 1.000 - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
16. dcst2 ENSDARG00000088693 1 2 - - - 1.000 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
17. si:dkey-53f14.2 si:dkey-53f14.2 4 1.955 - 1.000 - - 0.955 - - - -
18. creb5b ENSDARG00000070536 9 1.924 - - - 0.924 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
19. GALNT8_1 GALNT8_1 10 1.907 - - - 0.907 - - - 1.000 -
20. slc1a1 ENSDARG00000020212 104 1.896 0.896 1.000 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
21. gpr155a ENSDARG00000090804 27 1.889 - 0.889 - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
22. si:dkey-203o14.2 si:dkey-203o14.2 5 1.884 1.000 - 0.884 - - - - - -
23. si:dkey-256e21.1 si:dkey-256e21.1 11 1.879 - 1.000 - 0.879 - - - - -
24. CSMD1 CSMD1 15 1.877 1.000 - - - 0.877 - - - -
25. neurod6a ENSDARG00000040008 17 1.872 - 1.000 - - 0.872 - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
26. SGSM1_1 SGSM1_1 40 1.854 0.854 - - 1.000 - - - - -
27. ATP6AP1L ATP6AP1L 164 1.848 0.848 1.000 - - - - - - -
28. alx4b ENSDARG00000074442 29 1.844 - 1.000 - - 0.844 - - - - ALX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-050208-140]
29. si:ch211-188i4.4 5 1.844 - - - - 0.844 - - 1.000 - si:ch211-188i4.4, transcript variant X3
30. CRIP2 ENSDARG00000070670 323 1.84 0.955 0.885 - - - - - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
31. CR352265.1 ENSDARG00000062758 39 1.81 0.927 - - - - - - 0.883 -
32. BX950188.1 ENSDARG00000044326 47 1.805 - 0.892 - - 0.913 - - - -
33. nr5a1b ENSDARG00000023362 54 1.8 - 1.000 - 0.800 - - - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
34. ARHGEF40 ENSDARG00000078979 25 1.798 1.000 0.798 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
35. agmat ENSDARG00000059700 9 1.783 - - 0.875 - 0.908 - - - - agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
36. CU896645.1 CU896645.1 10 1.773 - 1.000 0.773 - - - - - -
37. il11a ENSDARG00000037859 5 1.771 0.771 1.000 - - - - - - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
38. CABZ01048021.1 CABZ01048021.1 15 1.733 - 1.000 - 0.733 - - - - -
39. OTOL1 OTOL1 19 1.732 - 1.000 - - - - - 0.732 -
40. BX640518.1 BX640518.1 24 1.73 - 1.000 - 0.730 - - - - -
41. CPNE8 ENSDARG00000025189 11 1.725 - 1.000 - - - - - 0.725 - copine VIII [Source:ZFIN;Acc:ZDB-GENE-100809-1]
42. si:dkey-203c4.2 si:dkey-203c4.2 4 1.714 - 0.714 - 1.000 - - - - -
43. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.512 0.807 0.705 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
44. ehmt2 ENSDARG00000102325 984 1.486 0.780 0.706 - - - - - - - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
45. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
46. 5S_rRNA_29 5S_rRNA_29 0 1 - - - - 1.000 - - - -
47. si:dkeyp-52c3.1 3 1 - - - 1.000 - - - - - si:dkeyp-52c3.1, transcript variant X1
48. si:dkey-2j6.4 si:dkey-2j6.4 0 1 - 1.000 - - - - - - -
49. C14H5orf45 C14H5orf45 83 1 - 1.000 - - - - - - -
50. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - - - 1.000 - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
51. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
52. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
53. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - 1.000 - - - - - - -
54. fam154b fam154b 2 1 - 1.000 - - - - - - -
55. SYNPO 2 1 - - - - 1.000 - - - - synaptopodin, transcript variant X2
56. wu:fb63c12 26 1 - 1.000 - - - - - - - wu:fb63c12
57. ccdc33 ENSDARG00000051858 11 1 - 1.000 - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
58. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
59. ccdc147 ccdc147 39 1 - 1.000 - - - - - - -
60. ENSDARG00000092910 ENSDARG00000092910 44 1 - 1.000 - - - - - - -
61. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - 1.000 - - - - - - -
62. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
63. si:dkey-58f10.4 ENSDARG00000094820 3 1 - 1.000 - - - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
64. cdcp2 ENSDARG00000075866 0 1 - - - - 1.000 - - - - CUB domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-485]
65. CABZ01069020.1 ENSDARG00000105806 19 1 - 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
66. ENSDARG00000089102 ENSDARG00000089102 1 1 - 1.000 - - - - - - -
67. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
68. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
69. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 1 - - - - 1.000 - - - - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
70. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
71. si:dkey-273g3.2 si:dkey-273g3.2 2 1 - - - - - - - 1.000 -
72. ENSDARG00000077328 ENSDARG00000077328 1 1 - 1.000 - - - - - - -
73. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
74. FAM175B FAM175B 23 1 - - - - 1.000 - - - -
75. il7r ENSDARG00000078970 4 1 - - - - 1.000 - - - - interleukin 7 receptor [Source:ZFIN;Acc:ZDB-GENE-080110-7]
76. CABZ01088982.1 ENSDARG00000109259 0 1 - - - - 1.000 - - - -
77. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
78. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
79. zgc:113397 zgc:113397 60 1 - 1.000 - - - - - - -
80. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
81. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
82. KCNMB3 KCNMB3 5 1 - - - - 1.000 - - - -
83. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
84. lgals3bpa ENSDARG00000037805 2 1 - - - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
85. XYLT2 ENSDARG00000059557 1 1 - 1.000 - - - - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
86. rbbp9 ENSDARG00000040713 12 1 - - - - - - - 1.000 - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
87. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
88. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
89. si:dkey-222o15.4 si:dkey-222o15.4 4 1 - - - - 1.000 - - - -
90. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - 1.000 - - - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
91. SEMA6B SEMA6B 35 1 - - - - - - - 1.000 -
92. CMA1_6 CMA1_6 2 1 - - - - - - - 1.000 -
93. CU367845.1 CU367845.1 215 1 - 1.000 - - - - - - -
94. slc12a2_1 ENSDARG00000104573 1 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
95. CU469547.1 CU469547.1 0 1 - - - - 1.000 - - - -
96. abcd1 ENSDARG00000074876 6 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
97. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - 1.000 - - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
98. lipt2 ENSDARG00000069852 14 1 - - - - - - - 1.000 - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
99. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
100. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -

There are 1130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA