Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sod3a

Gene Name Gene ID Reads Annotation
sod3a ENSDARG00000070168 438 superoxide dismutase 3, extracellular a [Source:ZFIN;Acc:ZDB-GENE-050309-208]










Genes with expression patterns similar to sod3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sod3a ENSDARG00000070168 438 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 superoxide dismutase 3, extracellular a [Source:ZFIN;Acc:ZDB-GENE-050309-208]
2. fam20a ENSDARG00000079486 1199 3.167 - - 0.771 0.724 - 0.875 - - 0.797 family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
3. rrm2b ENSDARG00000033367, ENSDARG00000115899 2754 3.108 0.712 - - - - 0.836 0.751 0.809 - ribonucleotide reductase M2 b [Source:ZFIN;Acc:ZDB-GENE-030616-614]
4. zgc:136410 ENSDARG00000102241 8433 3.052 - - - 0.759 - 0.792 0.728 - 0.773 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
5. fga ENSDARG00000020741 5580 2.98 - - 0.720 0.730 - 0.752 - - 0.778 fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
6. zgc:161979_1 zgc:161979_1 206500 2.937 - - - 0.706 - 0.742 0.733 - 0.756
7. lipf ENSDARG00000018529 1849 2.319 0.761 0.785 - - - 0.773 - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
8. LIMD2 ENSDARG00000078092 3414 2.301 - 0.737 - - - 0.745 0.819 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
9. PRODH2 PRODH2 1153 2.294 - - - 0.708 - 0.880 - - 0.706
10. SLC22A31 ENSDARG00000078882 1474 2.272 0.779 - - - - 0.765 0.728 - - solute carrier family 22, member 31 [Source:ZFIN;Acc:ZDB-GENE-130530-858]
11. sord ENSDARG00000053405 2406 2.238 - - - 0.751 - 0.731 - - 0.756 sorbitol dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-1231]
12. si:dkey-102c8.3 ENSDARG00000113572 4779 2.228 - 0.705 - - - 0.749 0.774 - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
13. fgb ENSDARG00000008969 11737 2.219 - - - 0.725 - 0.748 - - 0.746 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
14. sepp1b 1004 2.197 0.740 - 0.706 - - - - - 0.751 selenoprotein P, plasma, 1b
15. ankrd9 ENSDARG00000028804 392 2.179 - - 0.748 - - 0.716 0.715 - - ankyrin repeat domain 9 [Source:ZFIN;Acc:ZDB-GENE-041114-3]
16. nt5c3a ENSDARG00000058597 14299 2.177 - - - 0.707 - 0.740 0.730 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
17. CABZ01057488.1 ENSDARG00000110427 598 2.16 - 0.741 - - - 0.710 0.709 - -
18. spam1 ENSDARG00000004199 225 2.154 - - - - - 0.741 0.712 - 0.701 sperm adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-050506-63]
19. ctsla ENSDARG00000007836 67814 2.145 - - - - - 0.738 0.701 - 0.706 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
20. ambp ENSDARG00000004296, ENSDARG00000112731 1305 2.142 - - - 0.731 - - 0.701 - 0.710 alpha-1-microglobulin/bikunin precursor [Source:ZFIN;Acc:ZDB-GENE-040426-1608]
21. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.827 - - - - - 0.870 - 0.957 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
22. gnb1a ENSDARG00000090454 481 1.741 - - - - - - 0.771 0.970 - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
23. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.718 - 0.831 - - - - 0.887 - - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
24. pecr ENSDARG00000055976 639 1.698 - - - - - - 0.772 0.926 - peroxisomal trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-232]
25. scamp2l ENSDARG00000017010 491 1.697 - - - - - 0.831 0.866 - - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
26. cask cask 3384 1.692 - - - - - 0.864 0.828 - -
27. decr2 ENSDARG00000045257 603 1.679 - 0.781 - - - - - 0.898 - 2,4-dienoyl CoA reductase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-040426-2612]
28. cd9a ENSDARG00000005842 1708 1.678 - - - - - 0.866 - 0.812 - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
29. pard6b ENSDARG00000003865 990 1.673 - - - - - 0.710 - 0.963 - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
30. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 1.664 - - 0.783 - - 0.881 - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
31. mogs ENSDARG00000060252 1151 1.652 - - - - - - 0.750 0.902 - mannosyl-oligosaccharide glucosidase [Source:ZFIN;Acc:ZDB-GENE-070112-412]
32. npc1 ENSDARG00000017180 3724 1.647 0.809 - - - - 0.838 - - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
33. rac2 ENSDARG00000038010 5837 1.643 - 0.738 - - - - 0.905 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
34. CD68 CD68 4599 1.642 - - - - - 0.854 - - 0.788
35. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.64 0.753 0.887 - - - - - - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
36. ptgs2a ENSDARG00000004539 1207 1.64 - 0.710 - - - - 0.930 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
37. CABZ01045212.1 ENSDARG00000087525 1460 1.635 - 0.812 - - - - 0.823 - - major facilitator superfamily domain-containing protein 8-like [Source:NCBI gene;Acc:564731]
38. MPC2 ENSDARG00000024478 4194 1.634 - - - - - 0.895 - - 0.739 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
39. cyp2aa3 ENSDARG00000103347 880 1.634 - - - - - 0.736 0.898 - - cytochrome P450, family 2, subfamily AA, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-031030-8]
40. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 1.633 - 0.789 - - - - 0.844 - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
41. dhdhl ENSDARG00000028336 844 1.629 - - - - - 0.802 0.827 - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
42. prkacba ENSDARG00000001782 1340 1.626 - - - - - 0.806 - - 0.820 protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
43. creb3l3 creb3l3 1981 1.621 - - - - - 0.827 - - 0.794
44. c5 ENSDARG00000021004 3536 1.619 - - 0.783 - - - - - 0.836 complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
45. cd2ap ENSDARG00000015224 2830 1.618 - - - - - 0.852 0.766 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
46. tmed1a ENSDARG00000031325 1936 1.615 - - - - - 0.831 0.784 - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
47. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.614 - 0.767 - - - - 0.847 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
48. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 1.611 - - - - - 0.869 - - 0.742 kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
49. aqp12 ENSDARG00000043279 1881 1.608 - - - - - - 0.810 - 0.798 aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
50. vtnb ENSDARG00000053831 2364 1.607 - - - - - - 0.774 - 0.833 vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
51. casp7 ENSDARG00000091836 657 1.605 - 0.715 - - - - 0.890 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
52. tvp23b ENSDARG00000057060 361 1.604 - - - - - 0.720 - 0.884 - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
53. itgb1b.1 ENSDARG00000053232 4721 1.592 - - - - - 0.708 0.884 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
54. NCOA7_1 NCOA7_1 3222 1.59 - - - - - 0.839 - - 0.751
55. hexb ENSDARG00000034368 3505 1.587 - - - - - 0.842 0.745 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
56. tsta3 ENSDARG00000039666 1314 1.583 - 0.744 - - - - - 0.839 - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
57. apom ENSDARG00000076838 4732 1.583 - - - - - - 0.763 - 0.820 apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
58. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.582 - 0.806 - - - - 0.776 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
59. zgc:161979 zgc:161979 196746 1.577 - - - - - - 0.752 - 0.825
60. c8a ENSDARG00000039516 495 1.566 - - - - - 0.860 - - 0.706 complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
61. dao.1 ENSDARG00000035602 11969 1.565 - 0.807 - - - - - - 0.758 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
62. gpx4a ENSDARG00000068478 10991 1.564 - - - - - - 0.723 - 0.841 glutathione peroxidase 4a [Source:ZFIN;Acc:ZDB-GENE-030410-2]
63. ap1s3b ENSDARG00000027966 1064 1.563 - - - - - 0.833 0.730 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
64. cpvl ENSDARG00000056480 2115 1.561 - 0.805 - - - 0.756 - - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
65. adam10a ENSDARG00000053468 9308 1.561 - 0.842 - - - - 0.719 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
66. palm3 ENSDARG00000071215 1776 1.56 0.760 - - - - - 0.800 - - paralemmin 3 [Source:ZFIN;Acc:ZDB-GENE-061215-74]
67. APOB_1 APOB_1 2217 1.559 - - - - - 0.766 - - 0.793
68. znf710a ENSDARG00000014680 582 1.559 - 0.742 - - - - - 0.817 - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
69. akap7 ENSDARG00000043843 3596 1.554 - - - - - 0.752 - - 0.802 A kinase (PRKA) anchor protein 7 [Source:ZFIN;Acc:ZDB-GENE-040724-128]
70. jag1b ENSDARG00000013168 1002 1.55 - - - - - 0.785 - 0.765 - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
71. ggnbp2 ENSDARG00000055086 1419 1.547 - - - - - - 0.771 0.776 - gametogenetin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-060929-52]
72. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.545 - - - - - 0.797 - - 0.748 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
73. SERTAD4 ENSDARG00000089795 791 1.543 - 0.810 - - - - - 0.733 - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
74. slc30a8 ENSDARG00000100917 761 1.542 - - 0.787 - - - - - 0.755 solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
75. CLDN23 CLDN23 2002 1.541 - 0.752 - - - - 0.789 - -
76. bckdhbl ENSDARG00000093569 2166 1.541 - - - - - - - 0.780 0.761 branched chain keto acid dehydrogenase E1, beta polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-060830-1]
77. si:ch211-106k21.5 ENSDARG00000086052 684 1.541 - 0.789 - - - 0.752 - - - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
78. pitpnaa ENSDARG00000039490 1096 1.537 - 0.803 - - - 0.734 - - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
79. myl9b ENSDARG00000008030 7830 1.537 - 0.785 - - - 0.752 - - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
80. agr2 ENSDARG00000070480 5143 1.535 0.808 - - - - - 0.727 - - anterior gradient 2 [Source:ZFIN;Acc:ZDB-GENE-050417-214]
81. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 1.535 - - - - - 0.750 - - 0.785 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
82. slc22a6l ENSDARG00000055523 370 1.534 - - 0.749 - - 0.785 - - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
83. tfap2c ENSDARG00000040606 4628 1.528 - 0.702 - - - - 0.826 - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
84. efhd2 ENSDARG00000055759 7777 1.527 0.731 0.796 - - - - - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
85. PCOLCE_1 PCOLCE_1 2148 1.525 0.746 - - - - 0.779 - - -
86. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.522 - 0.790 - - - - 0.732 - - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
87. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 1.522 - - - - - 0.787 - - 0.735 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
88. uap1 ENSDARG00000052170 1168 1.522 - - - - - 0.734 - 0.788 - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
89. plbd1 ENSDARG00000063313 2842 1.521 - - - - - 0.723 0.798 - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
90. ppp1r13l ENSDARG00000013777 2260 1.511 - 0.727 - - - - 0.784 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
91. fgg ENSDARG00000037281, ENSDARG00000114705 10817 1.511 - - - 0.735 - - - - 0.776 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
92. slc2a2 ENSDARG00000056196 2061 1.51 - 0.762 - - - - - - 0.748 solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
93. nqo1 ENSDARG00000010250 6430 1.508 - 0.757 0.751 - - - - - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
94. abca1b ENSDARG00000079009 14119 1.508 - - - - - 0.782 - - 0.726 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
95. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.507 - 0.737 - - - - - 0.770 -
96. amdhd2 ENSDARG00000100376 656 1.506 - - - - - 0.747 0.759 - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
97. capn5a ENSDARG00000103317 1923 1.504 - 0.793 - - - - 0.711 - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
98. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.501 - 0.777 - - - - 0.724 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
99. pim2 ENSDARG00000059001 1893 1.497 - - 0.752 - - - 0.745 - - Pim-2 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-000831-6]
100. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.494 - - - - - 0.721 0.773 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]

There are 1314 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA