Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sod2

Gene Name Gene ID Reads Annotation
sod2 ENSDARG00000042644 1382 superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]










Genes with expression patterns similar to sod2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sod2 ENSDARG00000042644 1382 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
2. slc12a3 ENSDARG00000013855 990 2.277 - 0.865 - - - 0.703 0.709 - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
3. esrrb ENSDARG00000100847 636 2.26 0.769 0.725 - - - - 0.766 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
4. wdr65 wdr65 251 1.853 0.953 - - - - - - 0.900 -
5. ponzr1 ENSDARG00000090444 540 1.792 0.855 0.937 - - - - - - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
6. egln1 egln1 3746 1.757 - - - - - - 0.840 0.917 -
7. atp5j 4272 1.696 - - - - - - 0.862 0.834 - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
8. hs2st1a ENSDARG00000099478 864 1.689 - - - - - - 0.791 0.898 - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
9. mrps18b ENSDARG00000007065 2121 1.686 - - - - - - 0.800 0.886 - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
10. capsla ENSDARG00000103521 277 1.663 0.807 0.856 - - - - - - - calcyphosine-like a [Source:ZFIN;Acc:ZDB-GENE-030131-7291]
11. COMP 2018 1.662 - - - - - - 0.814 0.848 - cartilage oligomeric matrix protein, transcript variant X1
12. mb ENSDARG00000031952 351 1.66 0.935 - - - - - 0.725 - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
13. synpo2lb ENSDARG00000078696 2361 1.649 - - - - - - 0.766 0.883 - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
14. prnprs3 ENSDARG00000003705 1854 1.644 - - - - - - 0.778 0.866 - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
15. zc3h7b 2936 1.642 - 0.802 - - - - - 0.840 - zinc finger CCCH-type containing 7B
16. sfxn3 ENSDARG00000057374, ENSDARG00000112320 1766 1.634 - - - - - 0.868 0.766 - - sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]
17. mlf1 ENSDARG00000077301 789 1.631 - - - - - - 0.732 0.899 - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
18. emx1 ENSDARG00000039569 787 1.617 0.746 0.871 - - - - - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
19. spata18 ENSDARG00000052343 216 1.616 0.859 - - - - - 0.757 - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
20. gmpr ENSDARG00000016160 1537 1.614 - - - - - - 0.811 0.803 - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
21. mgst3 mgst3 3982 1.614 - - - - - - - 0.879 0.735
22. npsn ENSDARG00000010423 768 1.614 - - - - - - 0.750 0.864 - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
23. CU596012.2 CU596012.2 1046 1.614 - 0.910 - - - - 0.704 - -
24. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.612 - - - - - - 0.731 0.881 - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
25. cd248b ENSDARG00000077938 2561 1.612 - - - - - 0.720 0.892 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
26. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1.61 - - - - - - 0.708 0.902 - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
27. puf60a ENSDARG00000032175 5618 1.609 - - - - - - 0.713 0.896 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
28. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.598 - - - - - - 0.727 0.871 - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
29. cnbpb ENSDARG00000070922 14606 1.594 - - - - - - 0.812 0.782 - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
30. fmoda ENSDARG00000044895 1835 1.594 - - - - - - - 0.845 0.749 fibromodulin a [Source:ZFIN;Acc:ZDB-GENE-041008-23]
31. cdh17 ENSDARG00000005112 3816 1.593 0.703 0.890 - - - - - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
32. kcnj1a.1 ENSDARG00000091232 110 1.59 0.872 - - - - - 0.718 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
33. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 1.585 - - - - - - 0.745 0.840 - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
34. elovl1b ENSDARG00000103735 2783 1.584 - 0.867 - 0.717 - - - - - ELOVL fatty acid elongase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2755]
35. clcnk ENSDARG00000022560 355 1.583 - 0.866 - - - 0.717 - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
36. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.576 - - - - - - 0.735 0.841 - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
37. cacng1 cacng1 3118 1.575 - - - - - - 0.720 0.855 -
38. gal3st1 gal3st1 108 1.571 0.814 - - - - - 0.757 - -
39. alpi.1 ENSDARG00000015273 1712 1.562 - - 0.708 - - - - 0.854 - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
40. si:ch211-207j7.2 ENSDARG00000090793 316 1.56 0.715 0.845 - - - - - - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
41. map3k19 ENSDARG00000094272 59 1.557 - 0.824 - - - - 0.733 - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
42. zgc:66479 ENSDARG00000008732 3347 1.545 - - - - - - 0.712 0.833 - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
43. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.538 - - - - - - 0.792 0.746 - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
44. AL954146.5 AL954146.5 202 1.532 0.820 0.712 - - - - - - -
45. BX571714.1 ENSDARG00000114727 243 1.527 0.811 0.716 - - - - - - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
46. foxo3b ENSDARG00000042904 5046 1.526 - 0.811 - - - - 0.715 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
47. cox7c ENSDARG00000104537 12169 1.519 - - - - - 0.700 0.819 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
48. par1 par1 564 1.514 - - - - - 0.704 0.810 - -
49. zgc:194930 ENSDARG00000079584 326 1.512 0.771 0.741 - - - - - - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
50. vsg1 1870 1.504 - 0.756 - - - - 0.748 - - vessel-specific 1
51. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.501 - - - - - 0.720 0.781 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
52. mrps6 ENSDARG00000039543 1892 1.501 - - - - - 0.728 0.773 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
53. ap1s3b ENSDARG00000027966 1064 1.496 - 0.775 - - - - - - 0.721 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
54. gpr182 ENSDARG00000036616 455 1.495 - 0.737 - - - - 0.758 - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
55. anxa4 ENSDARG00000036456 3332 1.491 - 0.743 - - - - - 0.748 - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
56. usp4 ENSDARG00000014770 1684 1.487 - 0.755 - - - - 0.732 - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
57. wu:fb17g07 wu:fb17g07 10567 1.483 - - - - - - 0.715 0.768 -
58. CT027762.3_1 CT027762.3_1 62 1.479 0.731 0.748 - - - - - - -
59. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 1.473 0.742 - - - - - 0.731 - - cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
60. MRPL55 MRPL55 1711 1.471 - - - - - 0.757 0.714 - -
61. tnfaip8l3 ENSDARG00000088709 345 1.469 - 0.765 - - - - 0.704 - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
62. C13H20orf194 C13H20orf194 580 1.468 - 0.748 - - - - 0.720 - -
63. atp1a1a.4 ENSDARG00000001870 1864 1.465 0.727 - - - - - 0.738 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
64. fbrsl1 ENSDARG00000058232 885 1.463 - 0.701 - 0.762 - - - - - fibrosin-like 1 [Source:ZFIN;Acc:ZDB-GENE-070705-487]
65. hccs hccs 1758 1.462 - - - - - 0.711 0.751 - -
66. CR391961.2 CR391961.2 107 1.459 - 0.756 - - - - 0.703 - -
67. ccl-c5a ccl-c5a 217 1.456 0.756 - - - - - 0.700 - -
68. si:dkey-66i24.9 ENSDARG00000096689 796 1.448 - - - 0.724 - - 0.724 - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
69. scoca ENSDARG00000087333 1739 1.447 - 0.704 - - - - 0.743 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
70. rac1 rac1 7341 1.447 - - - - - - 0.733 0.714 -
71. stox2a ENSDARG00000070162 1620 1.424 - 0.722 - - - - 0.702 - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
72. foxj1a ENSDARG00000101919 1095 1.419 0.702 - - - - - 0.717 - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
73. dpyda dpyda 12 0.975 0.975 - - - - - - - -
74. tekt2 ENSDARG00000028973 160 0.949 0.949 - - - - - - - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
75. si:ch211-102c2.8 ENSDARG00000093823 168 0.948 0.948 - - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
76. egfl6 ENSDARG00000045958 335 0.945 - - - - - - - 0.945 - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
77. spg11 ENSDARG00000045968 542 0.943 - - - - - - - 0.943 - spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
78. tfap2b ENSDARG00000012667 746 0.939 - 0.939 - - - - - - - transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
79. yipf3 ENSDARG00000020449 3312 0.938 - - - - - - - 0.938 - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
80. rsph3 ENSDARG00000043470 74 0.935 0.935 - - - - - - - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
81. zgc:112263 zgc:112263 473 0.934 - - - - - - - 0.934 -
82. lrrc58a ENSDARG00000076773 1269 0.932 - - - - - - - 0.932 - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
83. necap2 ENSDARG00000046002 4372 0.929 - - - - - - - 0.929 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
84. sufu ENSDARG00000056801 1543 0.928 - 0.928 - - - - - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
85. mal 906 0.926 - 0.926 - - - - - - - mal, T-cell differentiation protein
86. HPCAL1 ENSDARG00000022763 2885 0.926 - 0.926 - - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
87. ENSDARG00000076021 ENSDARG00000076021 162 0.924 - 0.924 - - - - - - -
88. NOG NOG 324 0.921 - - - - - - 0.921 - -
89. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.921 - - - - - - - 0.921 - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
90. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.919 - - - - - - - 0.919 - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
91. golgb1 ENSDARG00000061951 2023 0.919 - - - - - - - 0.919 - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
92. mapk12a ENSDARG00000042021 1573 0.919 - - - - - - - 0.919 - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
93. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 0.916 - - - - - - - 0.916 - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
94. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.915 - - - - - - - 0.915 - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
95. hpcal4 ENSDARG00000070491 365 0.912 - 0.912 - - - - - - - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
96. tnnt2a ENSDARG00000020610 313 0.911 0.911 - - - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
97. ITGAE ITGAE 53 0.911 0.911 - - - - - - - -
98. hoxd13a ENSDARG00000059256 1190 0.911 0.911 - - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
99. lad1 ENSDARG00000022698 127 0.911 0.911 - - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
100. trmt1 ENSDARG00000010978 72 0.911 0.911 - - - - - - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]

There are 1470 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA