Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sod1

Gene Name Gene ID Reads Annotation
sod1 ENSDARG00000043848 1514 superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]










Genes with expression patterns similar to sod1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sod1 ENSDARG00000043848 1514 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
2. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 2.384 - 0.823 - - - 0.786 0.775 - - ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
3. SPAG9 ENSDARG00000078142 629 2.333 - 0.850 - - - 0.744 0.739 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
4. mettl6 ENSDARG00000070085 366 1.69 - 0.860 - - - - 0.830 - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
5. CR407594.2 CR407594.2 145 1.677 - 0.905 - - - - 0.772 - -
6. xrcc5_1 ENSDARG00000099298 1533 1.653 - 0.879 - - - 0.774 - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
7. mark2a ENSDARG00000079905 1765 1.646 - 0.871 - - - - 0.775 - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
8. fcho2 ENSDARG00000035389, ENSDARG00000112245 1996 1.615 - 0.827 - - - - 0.788 - - FCH domain only 2 [Source:ZFIN;Acc:ZDB-GENE-050522-228]
9. tnfaip8l2b ENSDARG00000046148 1133 1.611 0.816 - - - - 0.795 - - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
10. fbxw2 ENSDARG00000009745 618 1.609 - 0.811 - - - - 0.798 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
11. col12a1a ENSDARG00000078322 1833 1.606 - 0.892 - - - 0.714 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
12. arntl1a ENSDARG00000006791 550 1.598 - 0.856 - - - 0.742 - - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
13. tbp ENSDARG00000014994 1591 1.595 0.768 - - - - - 0.827 - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
14. kat6a ENSDARG00000018907 250 1.591 - 0.870 - - - 0.721 - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
15. camkk1 camkk1 542 1.588 - - - - - 0.791 0.797 - -
16. wipf2b ENSDARG00000006712 375 1.588 - 0.835 - - - - 0.753 - - WAS/WASL interacting protein family, member 2b [Source:ZFIN;Acc:ZDB-GENE-040625-182]
17. klf11b ENSDARG00000013794 646 1.586 0.709 0.877 - - - - - - - Kruppel-like factor 11b [Source:ZFIN;Acc:ZDB-GENE-061103-82]
18. tspear tspear 166 1.579 0.824 0.755 - - - - - - -
19. hbl4 ENSDARG00000054202, ENSDARG00000109644 248 1.577 0.718 0.859 - - - - - - - hexose-binding lectin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-287]
20. epha4a ENSDARG00000054454 1501 1.561 - 0.791 - - - - 0.770 - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
21. thtpa ENSDARG00000063049 286 1.553 0.807 - - - - - 0.746 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
22. nrg1 ENSDARG00000104314 1081 1.553 - 0.744 - - - - 0.809 - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
23. mrps5 ENSDARG00000062209, ENSDARG00000114003 619 1.547 - 0.742 - - - - 0.805 - - mitochondrial ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-060929-264]
24. nupl1 nupl1 1100 1.544 - 0.834 - - - - 0.710 - -
25. TMEM208 ENSDARG00000068291 643 1.541 - 0.827 - - - - 0.714 - - transmembrane protein 208 [Source:HGNC Symbol;Acc:HGNC:25015]
26. yipf2 ENSDARG00000021399 702 1.54 - 0.814 - - - 0.726 - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
27. EPHB3 2215 1.533 - 0.814 - - - 0.719 - - - EPH receptor B3
28. si:ch211-222k6.3 ENSDARG00000071578 127 1.533 - 0.827 - - - 0.706 - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
29. ube2j1 ENSDARG00000033489 497 1.532 - 0.745 - - - - 0.787 - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
30. ppcdc ENSDARG00000033020, ENSDARG00000109858 563 1.53 - 0.821 - - - 0.709 - - - phosphopantothenoylcysteine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-040426-1749]
31. KCTD9 KCTD9 147 1.525 0.745 - - - - - 0.780 - -
32. gpr37b ENSDARG00000033296 283 1.517 0.812 - - - - - 0.705 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
33. si:dkey-226l10.6 ENSDARG00000087483 1651 1.514 - 0.749 - - - - 0.765 - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
34. copz2 ENSDARG00000006786, ENSDARG00000112084 4375 1.51 - 0.799 - - - - 0.711 - - coatomer protein complex, subunit zeta 2 [Source:ZFIN;Acc:ZDB-GENE-000406-5]
35. mtx3 ENSDARG00000090195 42 1.509 0.763 - - - - - 0.746 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
36. CABZ01081148.1 CABZ01081148.1 789 1.508 - 0.720 - - - - 0.788 - -
37. ASPH ENSDARG00000055945 214 1.507 0.772 - - - - - 0.735 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
38. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.479 - - - - - 0.703 0.776 - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
39. utp15 ENSDARG00000002720 679 1.473 - 0.704 - - - - 0.769 - - utp15, U3 small nucleolar ribonucleoprotein, homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3831]
40. slc30a8 ENSDARG00000100917 761 1.471 - 0.759 - - - 0.712 - - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
41. haus7 ENSDARG00000037432, ENSDARG00000112118 820 1.468 0.746 0.722 - - - - - - - HAUS augmin-like complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-050506-15]
42. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.468 0.768 - - - - - 0.700 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
43. aldh3a2a ENSDARG00000028259 591 1.454 - 0.707 - - - - 0.747 - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
44. hmbox1a ENSDARG00000027082 2569 1.451 - 0.704 - - - 0.747 - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
45. XCR1_1 XCR1_1 187 1.451 - - - - - 0.740 0.711 - -
46. gosr2 ENSDARG00000053070 944 1.446 0.724 0.722 - - - - - - - golgi SNAP receptor complex member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3290]
47. arpc5b ENSDARG00000019062 2786 1.437 - 0.701 - - - 0.736 - - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
48. map2k5 ENSDARG00000011851 287 1.423 - 0.716 - - - - 0.707 - - mitogen-activated protein kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1517]
49. pak4 ENSDARG00000018110 1962 1.413 - - - - - 0.711 0.702 - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
50. CABZ01024770.1 CABZ01024770.1 150 0.956 - 0.956 - - - - - - -
51. klf5a 1072 0.946 - 0.946 - - - - - - - Kruppel-like factor 5a
52. FNIP2 FNIP2 593 0.927 - 0.927 - - - - - - -
53. clip2 ENSDARG00000059596 529 0.926 - 0.926 - - - - - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
54. si:dkey-52k20.13 si:dkey-52k20.13 428 0.921 - 0.921 - - - - - - -
55. asah2 ENSDARG00000012829 13 0.921 - 0.921 - - - - - - - N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
56. trim25l ENSDARG00000020863 292 0.918 - 0.918 - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
57. katnbl1 ENSDARG00000042522 1086 0.918 - 0.918 - - - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
58. MDFIC ENSDARG00000074223 781 0.916 - 0.916 - - - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
59. yeats4 ENSDARG00000045874 1168 0.912 - 0.912 - - - - - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
60. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.91 - 0.910 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
61. acaa1 ENSDARG00000004687 557 0.91 - 0.910 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
62. cux1b ENSDARG00000043134 641 0.908 - 0.908 - - - - - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
63. mogat3b ENSDARG00000003635 394 0.906 - 0.906 - - - - - - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
64. gpatch8 ENSDARG00000059768 2743 0.905 - 0.905 - - - - - - - G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]
65. FBXL3 FBXL3 1769 0.902 - 0.902 - - - - - - -
66. rpz2 ENSDARG00000091215 765 0.901 - 0.901 - - - - - - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
67. cep19 ENSDARG00000059175 266 0.9 - 0.900 - - - - - - - centrosomal protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-81]
68. slc9a7 ENSDARG00000076754 599 0.899 - 0.899 - - - - - - - solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 [Source:ZFIN;Acc:ZDB-GENE-050913-8]
69. vsig8b ENSDARG00000013685 246 0.898 - 0.898 - - - - - - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
70. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 0.897 - 0.897 - - - - - - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
71. msxd msxd 1750 0.895 - 0.895 - - - - - - -
72. ptpn3 ENSDARG00000055784 436 0.895 - 0.895 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
73. plp2 ENSDARG00000036630 193 0.894 - 0.894 - - - - - - - proteolipid protein 2 [Source:ZFIN;Acc:ZDB-GENE-030710-11]
74. TTF1_1 TTF1_1 299 0.894 - 0.894 - - - - - - -
75. slc44a5b ENSDARG00000057419 534 0.893 - 0.893 - - - - - - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
76. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 0.892 - 0.892 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
77. slc27a2a ENSDARG00000036237 166 0.892 - 0.892 - - - - - - - solute carrier family 27 (fatty acid transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-050706-104]
78. il13ra1 ENSDARG00000080020 443 0.892 - 0.892 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
79. tspan5a ENSDARG00000086033 1865 0.892 - 0.892 - - - - - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
80. med13a ENSDARG00000053884, ENSDARG00000112778 931 0.891 - 0.891 - - - - - - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
81. pcp4b 1080 0.89 - 0.890 - - - - - - - Purkinje cell protein 4b
82. gramd1a ENSDARG00000076689 1148 0.89 - 0.890 - - - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
83. pls3 ENSDARG00000037655 5175 0.89 - 0.890 - - - - - - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
84. ugt1b4 ENSDARG00000097024 1848 0.89 - 0.890 - - - - - - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
85. SON SON 510 0.889 - 0.889 - - - - - - -
86. msxb msxb 2650 0.889 - 0.889 - - - - - - -
87. tmem106ba ENSDARG00000101936 549 0.887 - 0.887 - - - - - - - transmembrane protein 106Ba [Source:ZFIN;Acc:ZDB-GENE-040426-1336]
88. C25H12orf4 C25H12orf4 317 0.885 - 0.885 - - - - - - -
89. MUM1L1 MUM1L1 968 0.885 - 0.885 - - - - - - -
90. RALGAPB ENSDARG00000088899 1456 0.884 - - - - - - 0.884 - - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
91. ctbp2 ctbp2 3255 0.883 - 0.883 - - - - - - -
92. zgc:110843 ENSDARG00000073845 940 0.883 - 0.883 - - - - - - - zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
93. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.882 - 0.882 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
94. hoga1 ENSDARG00000018944 800 0.88 - 0.880 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
95. vps37a ENSDARG00000017119, ENSDARG00000110505 772 0.879 - 0.879 - - - - - - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
96. dnajb9b ENSDARG00000016886 270 0.879 - 0.879 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
97. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.878 - 0.878 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
98. dbf4 ENSDARG00000074796 489 0.877 - 0.877 - - - - - - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
99. si:dkey-10g2.5 si:dkey-10g2.5 72 0.877 - 0.877 - - - - - - -
100. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.877 - 0.877 - - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]

There are 1368 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA