Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx6

Gene Name Gene ID Reads Annotation
snx6 ENSDARG00000058444 2645 sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]










Genes with expression patterns similar to snx6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx6 ENSDARG00000058444 2645 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]
2. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.712 - 0.844 - - - - 0.868 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
3. cetn3 ENSDARG00000011825 1087 1.702 - - - 0.896 - 0.806 - - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
4. tmem134 ENSDARG00000024828 3241 1.568 - 0.845 - - - - - - 0.723 transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
5. MAP4_1 MAP4_1 1153 1.567 - - - - - 0.803 0.764 - -
6. ECI2 ENSDARG00000102412 848 1.561 - - - - - 0.857 0.704 - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
7. praf2 ENSDARG00000032535 1400 1.541 - 0.813 - - - 0.728 - - - PRA1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-050417-190]
8. snai2 ENSDARG00000040046 2415 1.531 - 0.815 - 0.716 - - - - - snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
9. cdk16 ENSDARG00000032072 1993 1.528 - 0.718 - 0.810 - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
10. ube4b ENSDARG00000037017 8012 1.515 - - - 0.792 - 0.723 - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
11. psmb7 ENSDARG00000037962 11542 1.48 - 0.756 - - - - - - 0.724 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
12. map2k2a ENSDARG00000006609 856 1.475 - 0.721 - - - 0.754 - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
13. rer1 ENSDARG00000012747 6939 1.454 - - - 0.734 - - - - 0.720 retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
14. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 1.447 - 0.727 - - - - 0.720 - - hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
15. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.444 - 0.736 - 0.708 - - - - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
16. fam21c 1768 1.439 - - - 0.710 - - 0.729 - - family with sequence similarity 21, member C, transcript variant X6
17. mfsd5 ENSDARG00000015997 570 1.422 - - - 0.711 - - 0.711 - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
18. CABZ01067868.1 CABZ01067868.1 235 0.893 - - - 0.893 - - - - -
19. pdzrn3b ENSDARG00000073869 1566 0.886 - - - - - - 0.886 - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
20. tecpr2 ENSDARG00000060835 491 0.886 - - - 0.886 - - - - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
21. gorasp2 ENSDARG00000015126 3923 0.877 - 0.877 - - - - - - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
22. CCHCR1 CCHCR1 238 0.874 - - - 0.874 - - - - -
23. vps13d ENSDARG00000017986 183 0.873 - - - 0.873 - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
24. ntd5 ENSDARG00000040944 4988 0.873 - - - 0.873 - - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
25. serinc1 ENSDARG00000009106 10571 0.871 - 0.871 - - - - - - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
26. hoxa13a ENSDARG00000100312 543 0.871 - - - 0.871 - - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
27. msxa msxa 263 0.871 - - - 0.871 - - - - -
28. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 0.87 - 0.870 - - - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
29. efemp2b ENSDARG00000020811 116 0.869 - - - 0.869 - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
30. dpp6b ENSDARG00000024744 234 0.864 - - - 0.864 - - - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
31. PAPD5 2090 0.863 - - - - - 0.863 - - - PAP associated domain containing 5, transcript variant X1
32. LRRC8A LRRC8A 406 0.863 - - - 0.863 - - - - -
33. CASKIN2_1 CASKIN2_1 2299 0.86 - - - 0.860 - - - - -
34. crabp1b ENSDARG00000035904 2753 0.858 - - - 0.858 - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
35. gosr1 ENSDARG00000026654, ENSDARG00000113670, ENSDARG00000113785 588 0.855 - - - 0.855 - - - - - golgi SNAP receptor complex member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-133]
36. ankrd12 ENSDARG00000052419 2579 0.852 - - - - - 0.852 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
37. zgc:63637 zgc:63637 3636 0.851 - - - 0.851 - - - - -
38. rit1 ENSDARG00000069150 520 0.851 - - - - - 0.851 - - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
39. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.848 - - - 0.848 - - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
40. wdr37 ENSDARG00000074611 468 0.847 - - - 0.847 - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
41. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 0.844 - 0.844 - - - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
42. BX649554.3_1 BX649554.3_1 1071 0.843 - - - 0.843 - - - - -
43. uncx4.1 ENSDARG00000037760 472 0.84 - - - 0.840 - - - - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
44. fbxl5 ENSDARG00000043046 1403 0.84 - - - - - - 0.840 - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
45. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 0.839 - - - - - - 0.839 - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
46. bdh2 ENSDARG00000052696 1157 0.836 - - - - - 0.836 - - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:ZFIN;Acc:ZDB-GENE-050417-343]
47. sdk1a ENSDARG00000078866 159 0.836 - - - - - 0.836 - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
48. PPIL3 ENSDARG00000033370 714 0.835 - - - 0.835 - - - - - peptidylprolyl isomerase (cyclophilin)-like 3 [Source:ZFIN;Acc:ZDB-GENE-040625-159]
49. zfpl1 ENSDARG00000103453 860 0.834 - - - 0.834 - - - - - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
50. ptpmt1 ENSDARG00000013860 772 0.833 - - - - - 0.833 - - - protein tyrosine phosphatase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]
51. pphln1 ENSDARG00000045692 1023 0.832 - - - 0.832 - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
52. LSM5 ENSDARG00000071573 371 0.832 - - - 0.832 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
53. qsox1 ENSDARG00000039459 320 0.832 - - - 0.832 - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
54. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 0.831 - - - - - 0.831 - - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
55. sccpdhb ENSDARG00000024564 707 0.831 - - - - - 0.831 - - - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]
56. fam50a ENSDARG00000024895 3020 0.83 - - - 0.830 - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
57. pofut1 ENSDARG00000008953 1157 0.83 - - - - - 0.830 - - - protein O-fucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040303-2]
58. ubtf ENSDARG00000035066 4070 0.83 - - - - - - 0.830 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
59. gpnmb ENSDARG00000062688 259 0.827 - - - - - 0.827 - - - glycoprotein (transmembrane) nmb [Source:ZFIN;Acc:ZDB-GENE-060503-106]
60. yipf1 ENSDARG00000014474 542 0.826 - - - 0.826 - - - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
61. tmed7 ENSDARG00000046022 2435 0.826 - 0.826 - - - - - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
62. SENP2 ENSDARG00000073837 1411 0.826 - - - - - - 0.826 - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
63. b4galt1 ENSDARG00000002634 1076 0.825 - - - 0.825 - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
64. dact1 ENSDARG00000101635 1303 0.825 - - - - - - 0.825 - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
65. PLEKHH3 ENSDARG00000070174 2117 0.824 - 0.824 - - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
66. acsl4l acsl4l 540 0.823 - - - 0.823 - - - - -
67. C8H9orf116 C8H9orf116 379 0.823 - - - 0.823 - - - - -
68. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 0.822 - 0.822 - - - - - - - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
69. col4a4 ENSDARG00000002831 803 0.82 - - - 0.820 - - - - - collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
70. RSF1 RSF1 1242 0.82 - - - - - - 0.820 - -
71. rbm17 ENSDARG00000031346 2079 0.82 - - - 0.820 - - - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
72. adnp2b ENSDARG00000028431 4683 0.818 - - - - - - 0.818 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
73. atpv0e1 atpv0e1 1957 0.818 - - - - - 0.818 - - -
74. fam60al_1 949 0.818 - - - 0.818 - - - - - family with sequence similarity 60, member A, like
75. sdc3 3788 0.817 - - - - - 0.817 - - - syndecan 3
76. zgc:112496 ENSDARG00000004274 1258 0.816 - - - - - 0.816 - - - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
77. get4 ENSDARG00000024398 1818 0.815 - - - - - 0.815 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
78. usp12a ENSDARG00000078109 490 0.815 - - - 0.815 - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
79. bnip3la ENSDARG00000025468 3097 0.815 - 0.815 - - - - - - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
80. arpc4l ENSDARG00000058225 10107 0.814 - 0.814 - - - - - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
81. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 0.813 - - - - - - 0.813 - - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
82. mntb ENSDARG00000073988 1023 0.813 - - - 0.813 - - - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
83. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 0.813 - 0.813 - - - - - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
84. rnps1 ENSDARG00000116743 9994 0.813 - - - - - - 0.813 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
85. nup35 ENSDARG00000012222 1212 0.812 - - - - - 0.812 - - - nucleoporin 35 [Source:ZFIN;Acc:ZDB-GENE-030131-9407]
86. BX005272.1 BX005272.1 553 0.812 - - - - - 0.812 - - -
87. usf2 ENSDARG00000020228 2667 0.811 - 0.811 - - - - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
88. oser1 ENSDARG00000024669 676 0.81 - - - - - 0.810 - - - oxidative stress responsive serine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1325]
89. BX649281.3 BX649281.3 808 0.81 - - - - - 0.810 - - -
90. fam219aa ENSDARG00000016396 1788 0.81 - - - - - 0.810 - - - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
91. hyou1 ENSDARG00000013670 4172 0.81 - 0.810 - - - - - - - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
92. tnfaip8l3 ENSDARG00000088709 345 0.809 - - - 0.809 - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
93. cxcl-c5c cxcl-c5c 182 0.809 - - - - - 0.809 - - -
94. si:dkey-95p16.2 ENSDARG00000093484 3413 0.809 - - - 0.809 - - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
95. clic1 ENSDARG00000103340 2235 0.809 - 0.809 - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
96. zgc:92061 zgc:92061 21304 0.808 - - - 0.808 - - - - -
97. pno1 ENSDARG00000008502 4547 0.807 - - - - - - 0.807 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
98. atp2b1a ENSDARG00000012684 4673 0.807 - - - - - 0.807 - - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
99. letm2 ENSDARG00000077515 9561 0.806 - - - 0.806 - - - - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
100. TMEM128 552 0.806 - - - 0.806 - - - - - transmembrane protein 128

There are 608 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA