Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx5

Gene Name Gene ID Reads Annotation
snx5 ENSDARG00000020442 2463 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]










Genes with expression patterns similar to snx5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx5 ENSDARG00000020442 2463 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
2. dopey2 1088 2.92 - 0.706 - - - 0.710 0.795 0.709 - dopey family member 2, transcript variant X2
3. ikbkb ENSDARG00000079123 498 2.593 - - - - 0.961 - - 0.811 0.821 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
4. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 2.302 - - - - - 0.778 0.782 - 0.742 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
5. f10 ENSDARG00000088581 4968 2.151 - - - - - 0.702 0.746 - 0.703 coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
6. znf143a ENSDARG00000012887 1393 1.766 - - - - 0.963 - - 0.803 - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
7. ranbp9 ENSDARG00000061048 2687 1.747 - - - - 0.956 - - - 0.791 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
8. samm50l ENSDARG00000039681 2465 1.738 - - - - 0.931 - - - 0.807 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
9. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.722 - - - - 0.952 - - - 0.770 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
10. tpcn1 ENSDARG00000062362 563 1.713 - - - - 0.967 - - - 0.746 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
11. fibpa ENSDARG00000016058 2148 1.712 - - - - 0.952 0.760 - - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
12. C1H3orf70 C1H3orf70 634 1.71 0.746 - - - 0.964 - - - -
13. nol8 ENSDARG00000044143 425 1.707 - - - - 0.966 - - - 0.741 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
14. phf16 phf16 1116 1.701 - - - - 0.937 - - 0.764 -
15. arhgef1b ENSDARG00000055837 2330 1.701 - - - - 0.941 0.760 - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
16. cdan1 ENSDARG00000042261 658 1.694 - - - - 0.964 - - - 0.730 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
17. anxa4 ENSDARG00000036456 3332 1.682 - 0.741 - - 0.941 - - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
18. poc1bl ENSDARG00000012745 2451 1.681 - - - 0.739 0.942 - - - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
19. dpysl3 ENSDARG00000002587 4381 1.679 - 0.759 - - 0.920 - - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
20. mcrs1 ENSDARG00000020840 3232 1.679 - - - - 0.948 - - - 0.731 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
21. sirt2 ENSDARG00000011488 5389 1.67 - - - - 0.940 - 0.730 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
22. eya3 ENSDARG00000036100 1965 1.669 - - - - 0.930 - - - 0.739 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
23. brd7 ENSDARG00000008380 3654 1.669 - 0.700 - - 0.969 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
24. g6pca.2 ENSDARG00000013721 2034 1.667 - - - - 0.882 0.785 - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
25. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.629 - - - - - 0.773 0.856 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
26. dnajb6a ENSDARG00000004680 914 1.625 - 0.916 - - - - 0.709 - - DnaJ (Hsp40) homolog, subfamily B, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-45]
27. mid1ip1l ENSDARG00000018145 2789 1.614 - - - - - 0.817 0.797 - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
28. mknk1 ENSDARG00000018411 749 1.604 - 0.863 - - - - - 0.741 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
29. paip1 ENSDARG00000042892 902 1.603 - 0.794 - - - - 0.809 - - poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
30. pcdh10a ENSDARG00000099729 2214 1.603 - - - 0.755 0.848 - - - - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
31. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.601 - - - - - 0.843 0.758 - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
32. si:ch73-269m23.4 253 1.598 - 0.783 - - - 0.815 - - - si:ch73-269m23.4
33. rasl11a ENSDARG00000046013 1627 1.579 - - - 0.777 - - 0.802 - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
34. abcc2 ENSDARG00000014031, ENSDARG00000116140 1158 1.57 - - - - - 0.805 0.765 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1523]
35. apopt1 ENSDARG00000092473 682 1.567 - 0.826 - - - - - - 0.741 apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
36. dgat2 ENSDARG00000018846 5032 1.566 - - - - - 0.821 0.745 - - diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
37. polr1d ENSDARG00000037570 860 1.565 - 0.777 - - - - - - 0.788 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
38. TRIP10 TRIP10 1079 1.564 - - - - - - - 0.854 0.710
39. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.562 - - - - - 0.822 0.740 - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
40. tfpia ENSDARG00000034718 1257 1.561 - 0.848 - - - - 0.713 - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
41. sardh ENSDARG00000058102, ENSDARG00000112110 2150 1.561 - - - - - 0.786 0.775 - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
42. zgc:113348 ENSDARG00000103795 1351 1.555 - - - 0.812 - - - - 0.743 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
43. pdcd11 ENSDARG00000052480 2791 1.554 - - - - - - - 0.815 0.739 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
44. zgc:113314 ENSDARG00000069453 833 1.552 - - - - - 0.845 - 0.707 - zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]
45. adam17b ENSDARG00000093093 792 1.549 - - - - - - 0.835 - 0.714 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
46. bzw1b ENSDARG00000099148 2972 1.548 - - - - - - 0.786 - 0.762 basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
47. lgals2b ENSDARG00000038153 2196 1.548 - - - - - 0.746 0.802 - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
48. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.546 - 0.804 - 0.742 - - - - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
49. CU914772.1 CU914772.1 644 1.546 - - - - - 0.722 0.824 - -
50. MRVI1 ENSDARG00000074602 443 1.545 - 0.777 - - - - - 0.768 - murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
51. BX511013.1 ENSDARG00000112403 1018 1.541 - 0.796 - - - - - - 0.745 uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633]
52. zgc:162780 ENSDARG00000069548 340 1.541 - - - - - - 0.781 0.760 - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
53. rwdd ENSDARG00000068256 964 1.54 - 0.812 - - - - - - 0.728 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
54. zgc:162356 zgc:162356 5115 1.539 - 0.743 - - 0.796 - - - -
55. tm9sf4 ENSDARG00000002536 1684 1.536 - - - - - 0.782 - - 0.754 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
56. tpst1 ENSDARG00000073872 2490 1.533 - - - - - 0.722 - - 0.811 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
57. EMILIN3 1347 1.529 - - - - - 0.796 0.733 - - elastin microfibril interfacer 3
58. efnb2a ENSDARG00000020164 5262 1.529 - 0.710 - - - - 0.819 - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
59. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.529 - 0.786 - - - - - 0.743 - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
60. aldh6a1 ENSDARG00000053485 7744 1.527 - 0.701 - - 0.826 - - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
61. ACTN4_1 ACTN4_1 8550 1.522 - - - - 0.820 0.702 - - -
62. pxdc1b ENSDARG00000040309 571 1.517 - - - - - - 0.814 0.703 - PX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-091204-294]
63. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.515 - - - - - - - 0.788 0.727 StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
64. pcbd1 ENSDARG00000031981 3373 1.509 - - - - - 0.801 0.708 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
65. tlcd2 ENSDARG00000077396 2122 1.502 - - - - - 0.773 0.729 - - TLC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080204-81]
66. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.502 - - - - - - - 0.779 0.723 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
67. amotl2a ENSDARG00000061923 4713 1.501 - - - - - - 0.764 0.737 - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
68. CABZ01059390.1 CABZ01059390.1 4340 1.499 - - - - - 0.747 - - 0.752
69. camk2n1a ENSDARG00000025855 1467 1.499 - - - - - 0.768 0.731 - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
70. cyp2aa9 ENSDARG00000098890 839 1.498 - - - - - 0.756 0.742 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
71. CU469577.1 ENSDARG00000102850 1232 1.496 - - - - - 0.707 0.789 - -
72. nup153 ENSDARG00000099972 1462 1.49 - 0.738 - - - - 0.752 - - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
73. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.488 - - - - - - - 0.765 0.723 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
74. nt5c3a ENSDARG00000058597 14299 1.487 - - - - - 0.717 0.770 - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
75. im:7136729 im:7136729 1625 1.485 - - - 0.780 - - 0.705 - -
76. si:ch211-10d23.5 ENSDARG00000095510 2632 1.485 - 0.737 - - - - - 0.748 - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
77. tmem59l ENSDARG00000003655 1536 1.483 - 0.767 - - - - - - 0.716 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
78. zgc:174938_1 ENSDARG00000075622 667 1.483 - - - - - 0.734 0.749 - - zgc:174938 [Source:ZFIN;Acc:ZDB-GENE-070928-44]
79. ifrd1 ENSDARG00000068708 2858 1.476 - - - - - 0.711 - - 0.765 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
80. CABZ01003022.1 CABZ01003022.1 507 1.476 0.741 - - - - - - 0.735 -
81. trim33 ENSDARG00000016181 1718 1.473 - 0.732 - - - - - 0.741 - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
82. atp8a2 ENSDARG00000077492 3637 1.471 - - - - - 0.704 0.767 - - ATPase phospholipid transporting 8A2 [Source:ZFIN;Acc:ZDB-GENE-100209-2]
83. fkbp11 ENSDARG00000037000, ENSDARG00000111059 2888 1.471 - - - - - 0.742 0.729 - - FK506 binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-030616-357]
84. AOC3 AOC3 590 1.47 - - - - - - 0.707 - 0.763
85. umps ENSDARG00000012215 4564 1.469 - - - - - 0.712 - - 0.757 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
86. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.469 - - - - - 0.734 - 0.735 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
87. col6a6 col6a6 1165 1.467 - - - - - 0.730 0.737 - -
88. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.467 - - - 0.720 - - - 0.747 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
89. TESK1_1 TESK1_1 276 1.466 - - - - - - 0.733 0.733 -
90. CABZ01080098.1 ENSDARG00000110680 10942 1.466 - - - - - - 0.754 0.712 -
91. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.466 - - - - - - 0.766 0.700 - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
92. si:ch211-133l11.10 ENSDARG00000005626 381 1.465 - - - 0.722 - - - - 0.743 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
93. tpbgb ENSDARG00000037186 1216 1.462 - 0.724 - - - 0.738 - - - trophoblast glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-091218-2]
94. fastkd2 ENSDARG00000074031 748 1.462 - - - 0.735 - - - - 0.727 FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
95. mntb ENSDARG00000073988 1023 1.462 - 0.756 - - - - - - 0.706 MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
96. gapdhs ENSDARG00000039914 8760 1.461 - 0.722 - 0.739 - - - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
97. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.46 - - - - - 0.753 0.707 - - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
98. swap70b ENSDARG00000057286, ENSDARG00000109359, ENSDARG00000110820 292 1.459 0.743 0.716 - - - - - - - switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]
99. uroc1 ENSDARG00000070394 357 1.458 - - - - - 0.708 0.750 - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
100. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 1.458 0.712 - - - - - - 0.746 - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]

There are 1770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA