Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snx3

Gene Name Gene ID Reads Annotation
snx3 ENSDARG00000008678 3430 sorting nexin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-921]










Genes with expression patterns similar to snx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx3 ENSDARG00000008678 3430 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-921]
2. flot2a ENSDARG00000004830 5276 2.358 0.787 - - - - 0.787 0.784 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
3. ppp2r2d ENSDARG00000102009 5710 1.843 - 0.871 - - 0.972 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
4. zgc:55512 zgc:55512 4436 1.741 - - - - 0.977 - 0.764 - -
5. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.741 - 0.754 - - 0.987 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
6. znf609 znf609 1049 1.741 - 0.759 - - 0.982 - - - -
7. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.735 - - - - 0.983 - 0.752 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
8. AMPD2 AMPD2 1723 1.732 - 0.742 - - 0.990 - - - -
9. gtpbp4 ENSDARG00000018961 5323 1.729 - - - - 0.845 - 0.884 - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
10. slc47a1 ENSDARG00000046012 1426 1.72 - 0.768 - - 0.952 - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
11. itgb1bp1 ENSDARG00000007169 2723 1.703 0.726 - - - 0.977 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
12. ubtf ENSDARG00000035066 4070 1.7 - - - 0.724 0.976 - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
13. CR387996.1 ENSDARG00000097774 3037 1.7 0.718 - - - 0.982 - - - -
14. atpif1a 6030 1.69 - - - - 0.965 - 0.725 - - ATPase inhibitory factor 1a
15. abl1 ENSDARG00000035187 3553 1.687 - - - - 0.973 0.714 - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
16. dnmt3 dnmt3 1912 1.662 - - - 0.706 0.956 - - - -
17. got2b ENSDARG00000005840 7891 1.64 - 0.788 - - 0.852 - - - - glutamic-oxaloacetic transaminase 2b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7917]
18. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.604 - 0.725 - - 0.879 - - - -
19. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.592 - - - - 0.846 - 0.746 - - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
20. PPAP2A PPAP2A 2409 1.586 - 0.826 - - - - 0.760 - -
21. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.579 - 0.782 - - 0.797 - - - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
22. lyrm4 ENSDARG00000078352 2245 1.576 - - - - - 0.761 0.815 - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
23. sorbs2b ENSDARG00000061603 2491 1.57 - 0.840 - - - 0.730 - - - sorbin and SH3 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070308-3]
24. supt4h1 ENSDARG00000113969 1024 1.548 - 0.816 - 0.732 - - - - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
25. AL954697.2 AL954697.2 1809 1.542 0.724 0.818 - - - - - - -
26. Sep-02 Sep-02 10074 1.531 - - 0.799 - - - 0.732 - -
27. pom121 ENSDARG00000055113 1063 1.529 - 0.786 0.743 - - - - - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
28. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.528 0.776 0.752 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
29. PVRL4_1 PVRL4_1 702 1.517 0.739 - 0.778 - - - - - -
30. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 1.515 - 0.801 - 0.714 - - - - - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
31. si:dkey-177p2.6 ENSDARG00000042322 2783 1.515 0.725 0.790 - - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
32. sdhb ENSDARG00000075768 5493 1.51 0.803 - - - - - 0.707 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
33. gpatch11 ENSDARG00000026892 1360 1.505 - 0.763 - - - - 0.742 - - G patch domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040718-89]
34. cald1l cald1l 4115 1.502 - 0.798 - - - - 0.704 - -
35. CXXC5 CXXC5 1332 1.498 - 0.741 - 0.757 - - - - -
36. celf1 ENSDARG00000005315 5598 1.482 - 0.759 - - - - 0.723 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
37. thbs1b ENSDARG00000010785 3095 1.48 0.758 0.722 - - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
38. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 1.48 - - 0.760 - - 0.720 - - - microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
39. rassf10a 417 1.476 0.754 - 0.722 - - - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
40. arfrp1 ENSDARG00000057857 2840 1.472 0.727 - - - - - 0.745 - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
41. kmt2ca ENSDARG00000079312 2109 1.462 - - - - - 0.747 0.715 - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
42. kif11 ENSDARG00000010948 4973 1.461 - 0.720 - - 0.741 - - - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
43. me3 ENSDARG00000002305 3305 1.461 0.742 - - - - - 0.719 - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
44. rreb1b ENSDARG00000042652 2731 1.452 - - - - - 0.744 0.708 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
45. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.451 - - - 0.732 - - 0.719 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
46. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.451 - 0.741 0.710 - - - - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
47. syf2 ENSDARG00000004706 2463 1.43 - - - - - - 0.717 0.713 - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
48. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.429 - - - - - 0.723 0.706 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
49. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 1.427 0.722 - - - - - 0.705 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
50. impdh2 ENSDARG00000006900 3197 1.426 - - 0.700 - - - 0.726 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
51. sh3gl3b ENSDARG00000007302 573 1.418 - 0.716 - - - - 0.702 - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
52. st3gal4 ENSDARG00000041006 636 0.988 - - - - 0.988 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.988 - - - - 0.988 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.988 - - - - 0.988 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
55. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.988 - - - - 0.988 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
56. marveld1 ENSDARG00000011724 1025 0.988 - - - - 0.988 - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
57. commd3 ENSDARG00000045402 1601 0.988 - - - - 0.988 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
58. zgc:162967 zgc:162967 2132 0.988 - - - - 0.988 - - - -
59. rnf11a ENSDARG00000010442 592 0.987 - - - - 0.987 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
60. shisa3 ENSDARG00000075467 485 0.987 - - - - 0.987 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
61. zfyve21 ENSDARG00000027887 1687 0.987 - - - - 0.987 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
62. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.987 - - - - 0.987 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
63. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.987 - - - - 0.987 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
64. foxi3a ENSDARG00000055926 749 0.987 - - - - 0.987 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
65. ccdc19 ccdc19 495 0.987 - - - - 0.987 - - - -
66. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.987 - - - - 0.987 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
67. reep3l reep3l 608 0.987 - - - - 0.987 - - - -
68. tmem223 ENSDARG00000069494 1528 0.986 - - - - 0.986 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
69. zgc:162816 ENSDARG00000070416 974 0.986 - - - - 0.986 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
70. ypel3 ENSDARG00000055510 1344 0.986 - - - - 0.986 - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
71. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.986 - - - - 0.986 - - - -
72. ABTB2 ABTB2 584 0.986 - - - - 0.986 - - - -
73. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.986 - - - - 0.986 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
74. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.986 - - - - 0.986 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
75. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.986 - - - - 0.986 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
76. NDST1 NDST1 1584 0.986 - - - - 0.986 - - - -
77. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.986 - - - - 0.986 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
78. gli2b ENSDARG00000020884 1468 0.986 - - - - 0.986 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
79. nkain1 ENSDARG00000006859 1961 0.986 - - - - 0.986 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
80. rhbdd2 ENSDARG00000092463 937 0.986 - - - - 0.986 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
81. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.986 - - - - 0.986 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
82. tmem33 ENSDARG00000041332 2883 0.985 - - - - 0.985 - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
83. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.985 - - - - 0.985 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
84. tsc2 ENSDARG00000103125 1403 0.985 - - - - 0.985 - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
85. camk2a ENSDARG00000053617 950 0.985 - - - - 0.985 - - - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
86. smarcal1 ENSDARG00000102265 1921 0.985 - - - - 0.985 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
87. prox1a ENSDARG00000055158 1411 0.985 - - - - 0.985 - - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
88. dnajb12a ENSDARG00000039363 1072 0.985 - - - - 0.985 - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
89. zgc:113333 ENSDARG00000038242 797 0.985 - - - - 0.985 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
90. KDM5A ENSDARG00000104567 450 0.985 - - - - 0.985 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
91. snrnp70 ENSDARG00000077126 5921 0.985 - - - - 0.985 - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
92. kctd9 kctd9 973 0.985 - - - - 0.985 - - - -
93. unc119.1 ENSDARG00000009629 1193 0.985 - - - - 0.985 - - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
94. CR954963.1 ENSDARG00000097153 1135 0.985 - - - - 0.985 - - - -
95. bag1 ENSDARG00000020895 1660 0.984 - - - - 0.984 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
96. nfu1 ENSDARG00000068125 1743 0.984 - - - - 0.984 - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
97. mutyh 512 0.984 - - - - 0.984 - - - - mutY DNA glycosylase
98. tjp2a ENSDARG00000063309 1947 0.984 - - - - 0.984 - - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
99. pou4f1 ENSDARG00000005559 821 0.984 - - - - 0.984 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
100. rasl11a ENSDARG00000046013 1627 0.984 - - - - 0.984 - - - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]

There are 1010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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