Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx27b

Gene Name Gene ID Reads Annotation
snx27b ENSDARG00000016977 2768 sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]










Genes with expression patterns similar to snx27b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx27b ENSDARG00000016977 2768 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
2. shda ENSDARG00000094243 929 3.405 - 0.998 0.719 0.719 - - - 0.969 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
3. dbn1 ENSDARG00000069113 4527 2.512 - - - - - - 0.819 0.720 0.973 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
4. dtnbp1a ENSDARG00000055115 976 2.467 - - - - - 0.712 0.771 0.984 - dystrobrevin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1036]
5. hhatlb ENSDARG00000005139 6674 1.974 - 0.989 - - - - - - 0.985 hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
6. zgc:100868 ENSDARG00000004748 2582 1.957 - 0.963 - - - - - - 0.994 zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
7. tmbim4 ENSDARG00000014361 2549 1.956 - - - - - - - 0.958 0.998 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
8. ddx42 ENSDARG00000037928 1659 1.952 - 0.998 - - - - - 0.954 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
9. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.94 - 0.991 - - - - - 0.949 - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
10. rapgef2 ENSDARG00000005482 2586 1.916 - 0.995 - - - - - 0.921 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
11. nhsl1b ENSDARG00000042627 3697 1.905 - - - - - - - 0.914 0.991 NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
12. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.895 - - - - - - - 0.904 0.991 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
13. txnipa ENSDARG00000036107 8863 1.829 - 0.861 - - - - - - 0.968 thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
14. cd82a ENSDARG00000019098 6761 1.815 - 0.839 - - - - - - 0.976 CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
15. CDKN1C CDKN1C 667 1.795 - - - - - - 0.808 0.987 -
16. spag9a ENSDARG00000074531 1195 1.78 - - - - - 0.781 - - 0.999 sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]
17. mcu ENSDARG00000101175 1287 1.746 - - - - - 0.772 - 0.974 - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
18. FRRS1_1 FRRS1_1 831 1.746 - - - 0.773 - - - 0.973 -
19. hcfc1b ENSDARG00000012519 3633 1.744 - - - - - - 0.757 - 0.987 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
20. sema4ba ENSDARG00000074414 1194 1.743 - 0.999 - - - 0.744 - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
21. abcf2a ENSDARG00000038785 2065 1.742 - - - - - - 0.744 - 0.998 ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
22. trnau1apa ENSDARG00000101323 911 1.727 - 0.999 - - - - 0.728 - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
23. suz12a ENSDARG00000070256 2229 1.722 - - - - 0.740 - - 0.982 - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
24. mycla ENSDARG00000006003 1866 1.719 - - 0.721 - - - - - 0.998 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
25. puf60a ENSDARG00000032175 5618 1.711 - - - - - - 0.727 0.984 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
26. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.705 - - - - - - - 0.713 0.992 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
27. ccsapb ENSDARG00000040085 784 1.7 - 0.999 0.701 - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
28. si:ch211-120p12.3 1079 1.697 - - - - - 0.717 - 0.980 - si:ch211-120p12.3, transcript variant X2
29. st13 ENSDARG00000021973 7787 1.696 - 0.832 - - - - - 0.864 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
30. gsk3b ENSDARG00000017803 3438 1.686 - 0.986 - - - - 0.700 - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
31. si:dkey-103i16.2 si:dkey-103i16.2 492 1.678 - - 0.739 - - - - 0.939 -
32. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.675 - - - 0.748 - - - 0.927 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
33. zc3h7b 2936 1.674 - - - - - 0.714 - 0.960 - zinc finger CCCH-type containing 7B
34. ppp4ca ENSDARG00000070570 8395 1.674 - - - 0.722 - - - 0.952 - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
35. syncripl ENSDARG00000026723 3889 1.67 - - - - - - 0.745 0.925 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
36. mthfd1b ENSDARG00000040492 3784 1.667 - 0.962 - - - 0.705 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
37. wu:fb17g07 wu:fb17g07 10567 1.656 - - - - - - 0.763 0.893 -
38. slc38a7 ENSDARG00000012002 2219 1.652 - - - - - 0.711 - 0.941 - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
39. prnprs3 ENSDARG00000003705 1854 1.652 - - - - - - 0.702 0.950 - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
40. esrp1 ENSDARG00000011245 2097 1.639 - - - - 0.703 - - 0.936 - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
41. txnl4b ENSDARG00000058962 296 1.625 - - 0.755 - - - 0.870 - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
42. tbk1 ENSDARG00000103095 320 1.603 - - - - - 0.735 0.868 - - TANK-binding kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060512-359]
43. boc ENSDARG00000074335 4832 1.603 - 0.844 - - - - 0.759 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
44. AL929434.1 AL929434.1 3294 1.582 - - - - 0.701 - - 0.881 -
45. cyc1 ENSDARG00000038075 16699 1.568 - 0.784 - - - - - 0.784 - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
46. mcmbp ENSDARG00000055314 731 1.564 - - 0.720 - - - 0.844 - - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
47. rbm25 rbm25 3629 1.556 - - - 0.775 - - 0.781 - -
48. nsmce4a ENSDARG00000024311 125 1.523 - - - - 0.715 - 0.808 - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
49. nudc ENSDARG00000104837 1798 1.506 - - - - - 0.734 0.772 - - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
50. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.505 - - - - 0.735 - 0.770 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
51. RAC1 RAC1 2008 1.493 - - - 0.787 - 0.706 - - -
52. PLCL2 ENSDARG00000098826 596 1.485 - - - - 0.762 - 0.723 - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
53. U6 U6 931 1.476 - - - - - 0.731 0.745 - -
54. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.469 - - - - - 0.737 - 0.732 - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
55. ubp1 ENSDARG00000018000 1047 1.458 - - - - 0.722 - 0.736 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
56. sox4b ENSDARG00000098834 1634 1.453 - - - - - 0.707 - 0.746 - SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
57. ubap2l ENSDARG00000063219 1147 1.437 - - - - 0.721 0.716 - - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
58. cd40 ENSDARG00000054968 90 1.41 - - 0.707 - - - 0.703 - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
59. kpnb3 ENSDARG00000040245 7967 1.409 - - - - - - 0.705 0.704 - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
60. TTF1_5 TTF1_5 705 1 - - - - - - - - 1.000
61. SNAP23_1 SNAP23_1 613 1 - - - - - - - - 1.000
62. GTF3C1 GTF3C1 836 1 - - - - - - - - 1.000
63. sugp1 ENSDARG00000075936 826 1 - - - - - - - - 1.000 SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
64. gsk3aa ENSDARG00000029501 957 1 - - - - - - - - 1.000 glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
65. BCL6B ENSDARG00000069335 602 1 - - - - - - - - 1.000 B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
66. rfx5 ENSDARG00000063258 806 1 - - - - - - - - 1.000 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
67. CABZ01080492.1 CABZ01080492.1 495 1 - - - - - - - - 1.000
68. WIZ WIZ 1188 1 - - - - - - - - 1.000
69. epb41a ENSDARG00000099283 860 1 - - - - - - - - 1.000 erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
70. ppargc1b ENSDARG00000101569 3452 0.999 - - - - - - - - 0.999 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
71. BAX BAX 1673 0.999 - - - - - - - - 0.999
72. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 0.999 - - - - - - - - 0.999 growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
73. fam21c 1768 0.999 - - - - - - - - 0.999 family with sequence similarity 21, member C, transcript variant X6
74. thbs4a ENSDARG00000102777 625 0.999 - 0.999 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
75. tarbp2 ENSDARG00000070471 1946 0.999 - - - - - - - - 0.999 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
76. ctage5 530 0.999 - 0.999 - - - - - - - CTAGE family, member 5, transcript variant X8
77. zgc:110843 ENSDARG00000073845 940 0.999 - - - - - - - - 0.999 zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
78. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.999 - 0.999 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
79. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.999 - - - - - - - - 0.999 peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
80. angptl3 ENSDARG00000044365 574 0.999 - 0.999 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
81. CAPN1_1 ENSDARG00000055338 288 0.999 - 0.999 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
82. SYTL1 ENSDARG00000070094 282 0.999 - 0.999 - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
83. xylt1 ENSDARG00000061248 2357 0.999 - 0.999 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
84. PRKAR2B ENSDARG00000036446 812 0.999 - - - - - - - - 0.999 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
85. WDR81 ENSDARG00000079702 822 0.999 - 0.999 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
86. CC2D1A 1262 0.999 - - - - - - - - 0.999 coiled-coil and C2 domain containing 1A, transcript variant X2
87. wu:fi42e03 ENSDARG00000070709 276 0.999 - 0.999 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
88. aldh3a2b ENSDARG00000029381 2187 0.999 - 0.999 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
89. nbr1 nbr1 1161 0.999 - - - - - - - - 0.999
90. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.999 - 0.999 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
91. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 0.999 - - - - - - - - 0.999 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
92. rgs19 ENSDARG00000077385 783 0.999 - - - - - - - - 0.999 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
93. cap1 ENSDARG00000016350 891 0.999 - - - - - - - - 0.999 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
94. ZNF337_25 ZNF337_25 1713 0.999 - - - - - - - - 0.999
95. eya2 ENSDARG00000018984 1768 0.999 - 0.999 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
96. rbm14b ENSDARG00000103834 1597 0.999 - 0.999 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
97. tlk1b ENSDARG00000100715 1153 0.999 - - - - - - - - 0.999 tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
98. CABZ01079490.1 CABZ01079490.1 1808 0.999 - 0.999 - - - - - - -
99. cicb ENSDARG00000055502 1356 0.999 - - - - - - - - 0.999 capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
100. dcaf6 ENSDARG00000078311 1118 0.999 - - - - - - - - 0.999 ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]

There are 1250 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA