Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snx1a

Gene Name Gene ID Reads Annotation
snx1a ENSDARG00000071031 3975 sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]










Genes with expression patterns similar to snx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx1a ENSDARG00000071031 3975 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
2. gnb4b ENSDARG00000115383 7457 3.255 - 0.779 - - - 0.928 0.734 - 0.814 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
3. syne2b ENSDARG00000053484 9225 2.658 - - - - 0.853 0.895 - 0.910 - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
4. WDR61 ENSDARG00000007755 2827 2.619 - - - - 0.977 0.942 0.700 - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
5. perp ENSDARG00000063572 6423 2.596 0.909 - - - - 0.971 0.716 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
6. denr ENSDARG00000037229 8370 2.522 0.859 - - - 0.930 - 0.733 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
7. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 2.503 0.933 - - - - - 0.798 - 0.772 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
8. CABZ01079427.1 CABZ01079427.1 1682 2.471 0.973 0.747 - - - 0.751 - - -
9. C19H18orf21_1 C19H18orf21_1 1657 2.448 - 0.744 - - - 0.939 0.765 - -
10. immt ENSDARG00000102874 3435 2.394 0.947 0.736 - - - - - - 0.711 inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
11. RNF214 RNF214 816 1.961 0.978 - - - 0.983 - - - -
12. ppp1cab ENSDARG00000071566 4350 1.949 0.982 - - - 0.967 - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
13. cltcb ENSDARG00000090716 5544 1.932 0.971 - - - 0.961 - - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
14. klf11a ENSDARG00000030844 3972 1.861 - - - - 0.981 - - 0.880 - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
15. tomm7 ENSDARG00000067717 4452 1.856 - - - - 0.955 0.901 - - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
16. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.843 0.929 - - - 0.914 - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
17. errfi1 errfi1 979 1.835 - - - - 0.985 - - 0.850 -
18. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.822 0.951 - - - - - - 0.871 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
19. AL929434.1 AL929434.1 3294 1.819 - - - - - 0.918 - 0.901 -
20. TMEM150A_2 TMEM150A_2 739 1.818 0.972 - - - - - - 0.846 -
21. smim7 ENSDARG00000074848 1260 1.794 - 0.809 - - 0.985 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
22. calub ENSDARG00000005115 1478 1.791 0.974 0.817 - - - - - - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
23. stam2 ENSDARG00000005318 2980 1.785 - - - - 0.972 - - - 0.813 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
24. fam129ba ENSDARG00000062970 1578 1.783 - 0.799 - - - 0.984 - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
25. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.782 0.869 - - - - - - 0.913 - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
26. tmed2 ENSDARG00000026908 9070 1.782 - - - - - 0.954 - - 0.828 transmembrane p24 trafficking protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-269]
27. Sep-02 Sep-02 10074 1.778 - - - - 0.929 - 0.849 - -
28. pds5b ENSDARG00000098897 1732 1.777 - - - - 0.978 - 0.799 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
29. lman2 ENSDARG00000061854 6251 1.77 - - - - 0.829 0.941 - - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
30. RNF111 ENSDARG00000078802 1357 1.766 - 0.780 - - 0.986 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
31. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.761 0.963 0.798 - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
32. stxbp1a ENSDARG00000001994 5154 1.758 0.802 - - - 0.956 - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
33. gtpbp4 ENSDARG00000018961 5323 1.755 0.975 - - - - - 0.780 - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
34. BX511252.1 BX511252.1 59309 1.753 0.939 - - - 0.814 - - - -
35. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.752 - - - - 0.959 - 0.793 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
36. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 1.751 - - - - - 0.962 - - 0.789 ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
37. wdr43 ENSDARG00000077264 1992 1.739 - - - - 0.987 - - - 0.752 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
38. anxa1b ENSDARG00000100095 7763 1.735 - - - - 0.902 0.833 - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
39. mgst3 mgst3 3982 1.735 - 0.866 - - - - - 0.869 -
40. smek1 ENSDARG00000042187 3509 1.726 - - - - 0.967 - 0.759 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
41. ctdspla ENSDARG00000071673 1447 1.721 - 0.740 - - 0.981 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
42. BX682552.2 BX682552.2 1427 1.71 0.978 - 0.732 - - - - - -
43. ino80db ENSDARG00000062226 504 1.701 0.979 0.722 - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
44. phgdh ENSDARG00000001873 8325 1.701 0.952 - - - - - - 0.749 - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
45. AP2A1 ENSDARG00000054320 5591 1.698 - - - - 0.966 0.732 - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
46. tet3 ENSDARG00000062646 6672 1.698 - - - - 0.922 - 0.776 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
47. wsb1 ENSDARG00000021343 3828 1.696 - - - - 0.945 - 0.751 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
48. myom1a ENSDARG00000061249 10230 1.692 0.816 - - - 0.876 - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
49. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.691 0.909 - - - - - - - 0.782 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
50. psmb2 ENSDARG00000031511 4016 1.691 - 0.715 - - 0.976 - - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
51. slc25a5 ENSDARG00000092553 626 1.69 0.977 0.713 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
52. ppp1r7 ENSDARG00000009740 2606 1.69 - 0.744 - - 0.946 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
53. vgll4b ENSDARG00000103730 5266 1.687 - - - - 0.946 - 0.741 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
54. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.686 - - - - - - 0.852 0.834 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
55. RBM47 ENSDARG00000061985 2498 1.685 - - - - 0.975 - 0.710 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
56. rb1 ENSDARG00000006782 1445 1.685 - 0.770 - - - 0.915 - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
57. itga5 ENSDARG00000006353 1876 1.685 - - - - 0.977 - 0.708 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
58. hoxc8a ENSDARG00000070346 4252 1.683 0.932 - - - - - - 0.751 - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
59. VPS37B_1 VPS37B_1 1816 1.683 - - - - 0.979 0.704 - - -
60. fbln2 ENSDARG00000015156 1694 1.682 0.945 0.737 - - - - - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
61. GOLM1 GOLM1 1845 1.681 - 0.770 - - - 0.911 - - -
62. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.679 0.978 - - - - - - - 0.701 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
63. sumo1 ENSDARG00000044267 4242 1.676 - - - - - 0.934 0.742 - - small ubiquitin-like modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2186]
64. hoxb3a ENSDARG00000029263 5493 1.671 0.955 - - - - - - 0.716 - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
65. ash2l ENSDARG00000060392 4916 1.67 - - - - 0.960 - 0.710 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
66. setdb1a ENSDARG00000041243 1952 1.67 - 0.782 - - - - - 0.888 - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
67. selt1a 9746 1.667 0.914 - - - - - 0.753 - - selenoprotein T, 1a
68. adpgk2 ENSDARG00000062785 8229 1.667 - - - - - - - 0.869 0.798 ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
69. evpla ENSDARG00000019808 7565 1.666 - - - - 0.896 - - - 0.770 envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
70. rab27a ENSDARG00000103935 1173 1.657 - - - - - - - 0.897 0.760 RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
71. CCNA2 ENSDARG00000011094 3996 1.645 - - - - 0.932 - - - 0.713 cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
72. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.644 0.886 0.758 - - - - - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
73. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.637 - 0.790 - - - - - 0.847 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
74. ndufa2 ENSDARG00000021984 4754 1.635 - 0.703 - - - 0.932 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
75. fam3c ENSDARG00000056152 3833 1.633 0.855 - - - - - - - 0.778 family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
76. QPCT ENSDARG00000089717 1383 1.628 - 0.712 - - - 0.916 - - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
77. RPAP3 ENSDARG00000087962 946 1.628 - - - - - 0.915 0.713 - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
78. GID4 ENSDARG00000079482 1375 1.623 - 0.763 - - - - - 0.860 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
79. ankrd49 ENSDARG00000023508 631 1.622 - - - - - - - 0.889 0.733 ankyrin repeat domain 49 [Source:ZFIN;Acc:ZDB-GENE-050417-46]
80. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.617 - 0.835 - - - - - - 0.782 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
81. zgc:153675 ENSDARG00000071555 3769 1.608 - - - - - - - 0.841 0.767 zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
82. herpud1 ENSDARG00000024314 1207 1.604 - 0.796 - - 0.808 - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
83. srsf6a ENSDARG00000013729 8576 1.601 - - - - 0.889 - 0.712 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
84. ptp4a1 ENSDARG00000006242 10267 1.598 - - - - - 0.870 0.728 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
85. zgc:113054 ENSDARG00000053483 1079 1.596 - 0.725 - - - - - 0.871 - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
86. snai2 ENSDARG00000040046 2415 1.594 - 0.841 - - - - 0.753 - - snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
87. capn9 ENSDARG00000012341 12911 1.585 - - - - 0.851 0.734 - - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
88. si:ch211-120p12.3 1079 1.583 - 0.702 - - - - - 0.881 - si:ch211-120p12.3, transcript variant X2
89. eif3f ENSDARG00000077533 24387 1.576 - - - - - 0.866 0.710 - - eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
90. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.576 - 0.731 - - - - - 0.845 - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
91. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.571 - 0.734 - - - - 0.837 - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
92. si:dkey-117n7.3 ENSDARG00000092944 2518 1.57 - - - - - - - 0.853 0.717 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
93. smg7 ENSDARG00000060767 2759 1.569 - - - - - - 0.745 0.824 - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
94. piezo1 ENSDARG00000076870 4704 1.564 - 0.791 - - - - - - 0.773 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
95. cdh11 ENSDARG00000021442 1601 1.56 - 0.775 - - - - 0.785 - - cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
96. ostc ENSDARG00000104901 16240 1.555 0.758 - - - 0.797 - - - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
97. TNPO2 ENSDARG00000042887 2290 1.552 - 0.735 - - - - - 0.817 - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
98. ZBTB16 ZBTB16 3385 1.552 - 0.761 - - - - - 0.791 -
99. nrp1a ENSDARG00000102153 4154 1.548 - - - - 0.840 - 0.708 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
100. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.547 - - - - - - 0.719 - 0.828 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]

There are 1515 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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