Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx18b

Gene Name Gene ID Reads Annotation
snx18b ENSDARG00000044246, ENSDARG00000110012 51 sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]










Genes with expression patterns similar to snx18b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx18b ENSDARG00000044246, ENSDARG00000110012 51 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
2. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 2.61 1.000 - 0.759 - - - 0.851 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
3. si:dkey-97l20.5 si:dkey-97l20.5 33 1.893 - - - - - 1.000 0.893 - -
4. TMEM74 26 1.885 - - - - - 0.956 0.929 - - transmembrane protein 74, transcript variant X3
5. efemp2b_1 ENSDARG00000020811 77 1.833 - 0.833 - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
6. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.83 - - - - - 1.000 0.830 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
7. si:dkey-208k4.1 si:dkey-208k4.1 15 1.804 - 0.804 - - - 1.000 - - -
8. cyp39a1 ENSDARG00000017982 4 1.794 - - - - - 1.000 0.794 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
9. si:ch211-121j5.2 si:ch211-121j5.2 86 1.754 - 0.754 - - - 1.000 - - -
10. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.746 - 0.746 - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
11. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.739 0.916 - - - - 0.823 - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
12. CABZ01061873.1 CABZ01061873.1 51 1.725 - 0.725 - - - 1.000 - - -
13. C18H15orf59 C18H15orf59 80 1.723 - - - - - 0.872 0.851 - -
14. smad9 368 1.722 - - - - - 1.000 0.722 - - SMAD family member 9, transcript variant X1
15. lyve1a ENSDARG00000075833 25 1.697 - - - - - - 0.757 0.940 - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
16. si:ch211-270n8.3 87 1.683 - 0.846 - - - - 0.837 - - si:ch211-270n8.3, transcript variant X2
17. CR848045.1 CR848045.1 459 1.668 0.712 0.956 - - - - - - -
18. BX649458.1 BX649458.1 166 1.637 0.701 0.936 - - - - - - -
19. si:ch73-334d15.1 ENSDARG00000061672 49 1.63 - 0.833 - - - - - 0.797 - si:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
20. CCSAP CCSAP 147 1.611 - 0.857 - - - 0.754 - - -
21. rap2ip rap2ip 681 1.59 0.860 0.730 - - - - - - -
22. polm ENSDARG00000103470 49 1.586 - - 0.792 - - - 0.794 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
23. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.586 - 0.801 - - - 0.785 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
24. FRMPD1 34 1.585 0.881 - - - - 0.704 - - - FERM and PDZ domain containing 1, transcript variant X3
25. serpinb1l2 ENSDARG00000070396 37 1.571 - - 0.777 - - - 0.794 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
26. AP5B1 ENSDARG00000078805 62 1.57 - - 0.721 - - 0.849 - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
27. vps13d ENSDARG00000017986 183 1.556 - - 0.764 - - - 0.792 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
28. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.548 - - - - - 0.838 0.710 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
29. ubxn10 ENSDARG00000052535 24 1.545 - 0.804 0.741 - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
30. nek1 ENSDARG00000022350 158 1.54 - 0.702 - - - 0.838 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
31. LYPLAL1 ENSDARG00000088764 87 1.532 - 0.754 - - - - 0.778 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
32. MPP3_1 MPP3_1 88 1.525 0.730 - - - - 0.795 - - -
33. si:ch73-115f13.1 si:ch73-115f13.1 15 1.524 - - - 0.730 - - 0.794 - -
34. CSF3 CSF3 4 1.522 - - - 0.728 - - 0.794 - -
35. aven ENSDARG00000002894 49 1.515 - - 0.721 - - - 0.794 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
36. vgf ENSDARG00000105529 247 1.508 0.719 0.789 - - - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
37. CLDND1_1 CLDND1_1 50 1.494 - - 0.700 - - - 0.794 - -
38. CABZ01041804.1 CABZ01041804.1 312 1.493 - 0.725 0.768 - - - - - -
39. si:ch73-6k14.2 ENSDARG00000096031 16 1.488 - - - 0.736 - - 0.752 - - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
40. efna3b ENSDARG00000098295 319 1.488 - - - - - 0.787 0.701 - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
41. si:ch211-222k6.2 ENSDARG00000087046 144 1.488 - - 0.771 - - 0.717 - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
42. kctd1 ENSDARG00000074056 652 1.487 - 0.759 - - - - 0.728 - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
43. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 1.486 - - - - - 0.702 - 0.784 - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
44. mnx2b ENSDARG00000030350 484 1.483 0.757 - - - - 0.726 - - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
45. C3H17orf75 C3H17orf75 432 1.477 - 0.775 - - - 0.702 - - -
46. ccdc103 ENSDARG00000053455 81 1.442 - 0.717 - - - - 0.725 - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
47. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
48. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
49. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
50. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
51. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
52. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
53. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
54. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
55. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
56. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
57. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
58. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
59. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
60. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
61. fam5b fam5b 45 1 - - - - - 1.000 - - -
62. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
63. dapk2 dapk2 24 1 - - - - - 1.000 - - -
64. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
65. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
66. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
67. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
68. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
69. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
70. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
71. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
72. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
73. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
74. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
75. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
76. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
77. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
78. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
79. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
80. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
81. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
82. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
83. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
84. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
85. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
86. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
87. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
88. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
89. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
90. BX284672.1 BX284672.1 11 1 - 1.000 - - - - - - -
91. BX088711.1 BX088711.1 125 1 - 1.000 - - - - - - -
92. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
93. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
94. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
95. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
96. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
97. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
98. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
99. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
100. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]

There are 962 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA