Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx18b

Gene Name Gene ID Reads Annotation
snx18b ENSDARG00000044246, ENSDARG00000110012 51 sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]










Genes with expression patterns similar to snx18b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx18b ENSDARG00000044246, ENSDARG00000110012 51 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
2. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 2.61 1.000 - 0.759 - - - 0.851 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
3. si:dkey-97l20.5 si:dkey-97l20.5 33 1.893 - - - - - 1.000 0.893 - -
4. TMEM74 26 1.885 - - - - - 0.956 0.929 - - transmembrane protein 74, transcript variant X3
5. efemp2b_1 ENSDARG00000020811 77 1.833 - 0.833 - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
6. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.83 - - - - - 1.000 0.830 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
7. si:dkey-208k4.1 si:dkey-208k4.1 15 1.804 - 0.804 - - - 1.000 - - -
8. cyp39a1 ENSDARG00000017982 4 1.794 - - - - - 1.000 0.794 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
9. si:ch211-121j5.2 si:ch211-121j5.2 86 1.754 - 0.754 - - - 1.000 - - -
10. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.746 - 0.746 - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
11. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.739 0.916 - - - - 0.823 - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
12. CABZ01061873.1 CABZ01061873.1 51 1.725 - 0.725 - - - 1.000 - - -
13. C18H15orf59 C18H15orf59 80 1.723 - - - - - 0.872 0.851 - -
14. smad9 368 1.722 - - - - - 1.000 0.722 - - SMAD family member 9, transcript variant X1
15. lyve1a ENSDARG00000075833 25 1.697 - - - - - - 0.757 0.940 - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
16. si:ch211-270n8.3 87 1.683 - 0.846 - - - - 0.837 - - si:ch211-270n8.3, transcript variant X2
17. CR848045.1 CR848045.1 459 1.668 0.712 0.956 - - - - - - -
18. BX649458.1 BX649458.1 166 1.637 0.701 0.936 - - - - - - -
19. si:ch73-334d15.1 ENSDARG00000061672 49 1.63 - 0.833 - - - - - 0.797 - si:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
20. CCSAP CCSAP 147 1.611 - 0.857 - - - 0.754 - - -
21. rap2ip rap2ip 681 1.59 0.860 0.730 - - - - - - -
22. hoxb6b ENSDARG00000026513, ENSDARG00000111786 544 1.586 - 0.801 - - - 0.785 - - - homeobox B6b [Source:ZFIN;Acc:ZDB-GENE-000823-7]
23. polm ENSDARG00000103470 49 1.586 - - 0.792 - - - 0.794 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
24. FRMPD1 34 1.585 0.881 - - - - 0.704 - - - FERM and PDZ domain containing 1, transcript variant X3
25. serpinb1l2 ENSDARG00000070396 37 1.571 - - 0.777 - - - 0.794 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
26. AP5B1 ENSDARG00000078805 62 1.57 - - 0.721 - - 0.849 - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
27. vps13d ENSDARG00000017986 183 1.556 - - 0.764 - - - 0.792 - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
28. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.548 - - - - - 0.838 0.710 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
29. ubxn10 ENSDARG00000052535 24 1.545 - 0.804 0.741 - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
30. nek1 ENSDARG00000022350 158 1.54 - 0.702 - - - 0.838 - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
31. LYPLAL1 ENSDARG00000088764 87 1.532 - 0.754 - - - - 0.778 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
32. MPP3_1 MPP3_1 88 1.525 0.730 - - - - 0.795 - - -
33. si:ch73-115f13.1 si:ch73-115f13.1 15 1.524 - - - 0.730 - - 0.794 - -
34. CSF3 CSF3 4 1.522 - - - 0.728 - - 0.794 - -
35. aven ENSDARG00000002894 49 1.515 - - 0.721 - - - 0.794 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
36. vgf ENSDARG00000105529 247 1.508 0.719 0.789 - - - - - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
37. CLDND1_1 CLDND1_1 50 1.494 - - 0.700 - - - 0.794 - -
38. CABZ01041804.1 CABZ01041804.1 312 1.493 - 0.725 0.768 - - - - - -
39. efna3b ENSDARG00000098295 319 1.488 - - - - - 0.787 0.701 - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
40. si:ch73-6k14.2 ENSDARG00000096031 16 1.488 - - - 0.736 - - 0.752 - - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
41. si:ch211-222k6.2 ENSDARG00000087046 144 1.488 - - 0.771 - - 0.717 - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
42. kctd1 ENSDARG00000074056 652 1.487 - 0.759 - - - - 0.728 - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
43. pcgf5a ENSDARG00000071007, ENSDARG00000113711, ENSDARG00000114273 22 1.486 - - - - - 0.702 - 0.784 - polycomb group ring finger 5a [Source:ZFIN;Acc:ZDB-GENE-080723-33]
44. mnx2b ENSDARG00000030350 484 1.483 0.757 - - - - 0.726 - - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
45. C3H17orf75 C3H17orf75 432 1.477 - 0.775 - - - 0.702 - - -
46. ccdc103 ENSDARG00000053455 81 1.442 - 0.717 - - - - 0.725 - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
47. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
48. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
49. dapk2 dapk2 24 1 - - - - - 1.000 - - -
50. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
51. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
52. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
53. slc30a2 ENSDARG00000021305 4 1 - - - - - 1.000 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
54. itm1 itm1 32 1 - - - - - 1.000 - - -
55. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
56. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
57. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
58. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
59. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
60. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
61. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
62. fam5b fam5b 45 1 - - - - - 1.000 - - -
63. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
64. hel_dr4 hel_dr4 12 1 1.000 - - - - - - - -
65. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
66. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
67. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
68. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
69. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
70. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
71. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
72. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
73. olig3 ENSDARG00000074253 84 1 1.000 - - - - - - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
74. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
75. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
76. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
77. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
78. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
79. BX511266.1 BX511266.1 21 1 1.000 - - - - - - - -
80. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
81. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
82. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
83. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
84. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
85. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
86. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
87. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
88. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
89. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
90. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
91. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
92. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
93. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
94. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
95. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
96. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
97. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
98. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
99. DKK3 DKK3 12 1 - - - - - 1.000 - - -
100. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -

There are 962 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA