Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snx17

Gene Name Gene ID Reads Annotation
snx17 ENSDARG00000091418 781 sorting nexin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9475]










Genes with expression patterns similar to snx17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx17 ENSDARG00000091418 781 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9475]
2. GK2 GK2 813 1.583 0.854 0.729 - - - - - - -
3. lnpep ENSDARG00000100394 1436 1.576 - 0.797 - - - - 0.779 - - leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
4. mmaa ENSDARG00000060383, ENSDARG00000110058, ENSDARG00000115228 317 1.525 - 0.731 - - - - 0.794 - - methylmalonic aciduria (cobalamin deficiency) cblA type [Source:ZFIN;Acc:ZDB-GENE-070928-15]
5. tgm1l4 ENSDARG00000101407 800 1.498 0.770 - - - - - 0.728 - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
6. pnpla2 ENSDARG00000089390 129 0.891 0.891 - - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
7. hnf1a ENSDARG00000009470 60 0.891 0.891 - - - - - - - - HNF1 homeobox a [Source:ZFIN;Acc:ZDB-GENE-021206-12]
8. foxa1 ENSDARG00000102138 1797 0.881 - 0.881 - - - - - - - forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
9. kazald2 ENSDARG00000078518 3062 0.88 0.880 - - - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
10. CU929378.1 CU929378.1 514 0.879 0.879 - - - - - - - -
11. mylipb ENSDARG00000055118 144 0.874 0.874 - - - - - - - - myosin regulatory light chain interacting protein b [Source:ZFIN;Acc:ZDB-GENE-061027-67]
12. hmbox1b 597 0.872 - - - - - 0.872 - - - homeobox containing 1 b, transcript variant X3
13. SHROOM3 ENSDARG00000102180 419 0.867 0.867 - - - - - - - - shroom family member 3 [Source:ZFIN;Acc:ZDB-GENE-120817-1]
14. rrp9 ENSDARG00000041991, ENSDARG00000112140 1150 0.864 - 0.864 - - - - - - - ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060427-1]
15. cdipt ENSDARG00000070686 1318 0.855 - - - - - - 0.855 - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
16. si:ch211-179l5.5 si:ch211-179l5.5 249 0.855 0.855 - - - - - - - -
17. kctd16b ENSDARG00000020102 83 0.852 0.852 - - - - - - - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
18. ZNRF4 ZNRF4 16 0.851 0.851 - - - - - - - -
19. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.85 0.850 - - - - - - - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
20. qars ENSDARG00000010316 2715 0.843 - 0.843 - - - - - - - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
21. foxc1b ENSDARG00000055398 1499 0.839 - 0.839 - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
22. rap1a rap1a 5654 0.837 - - - - - - 0.837 - -
23. tax1bp1a ENSDARG00000098288 587 0.834 - 0.834 - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-587]
24. akap6 ENSDARG00000077295 1382 0.834 - 0.834 - - - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
25. mcamb ENSDARG00000005368 1660 0.831 - 0.831 - - - - - - - melanoma cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030219-213]
26. auh ENSDARG00000042975 1841 0.821 - 0.821 - - - - - - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
27. ssb ENSDARG00000029252 3394 0.818 - 0.818 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
28. desi2 ENSDARG00000004460 1593 0.814 - 0.814 - - - - - - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
29. myo1b ENSDARG00000024694 1761 0.812 - - - - - - 0.812 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
30. casc4 ENSDARG00000074490 2019 0.812 - 0.812 - - - - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
31. lrrc8a lrrc8a 674 0.811 0.811 - - - - - - - -
32. tbl1xr1a ENSDARG00000058696 5439 0.811 - - - - - - 0.811 - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
33. orc4 ENSDARG00000101161 1081 0.81 - - - - - - 0.810 - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
34. CEP85 ENSDARG00000060215 537 0.809 - - - - - - 0.809 - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
35. FP236812.4 FP236812.4 1244 0.805 - 0.805 - - - - - - -
36. znf648 ENSDARG00000104823 1918 0.805 - 0.805 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
37. zgc:174855 ENSDARG00000094559 33515 0.805 0.805 - - - - - - - - zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
38. ptprk ENSDARG00000063416 742 0.805 - 0.805 - - - - - - - protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
39. foxn3 ENSDARG00000012833 169 0.804 0.804 - - - - - - - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
40. CABZ01068246.1 ENSDARG00000114719 353 0.802 0.802 - - - - - - - -
41. rca2.1 ENSDARG00000056075 3410 0.8 - - - - - - 0.800 - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
42. tlk1a ENSDARG00000042467 2339 0.799 - 0.799 - - - - - - - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
43. ndufaf4 ENSDARG00000077859 552 0.799 - 0.799 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 4 [Source:ZFIN;Acc:ZDB-GENE-060810-114]
44. tmem41aa ENSDARG00000070028 248 0.798 0.798 - - - - - - - - transmembrane protein 41aa [Source:ZFIN;Acc:ZDB-GENE-050522-53]
45. ppp1r7 ENSDARG00000009740 2606 0.796 - - - - - - 0.796 - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
46. ppap2b ppap2b 2900 0.796 - - - - - - 0.796 - -
47. fndc5b ENSDARG00000035895 366 0.796 - 0.796 - - - - - - - fibronectin type III domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-060503-916]
48. igdcc4 ENSDARG00000076919 1303 0.796 - 0.796 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
49. clcn5 clcn5 492 0.795 0.795 - - - - - - - -
50. tjp1a ENSDARG00000077506 2658 0.794 - - - - - - 0.794 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
51. cbx6a ENSDARG00000071051 379 0.793 0.793 - - - - - - - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
52. chrng ENSDARG00000086647 676 0.793 - 0.793 - - - - - - - cholinergic receptor, nicotinic, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-3805]
53. dyrk2 ENSDARG00000094646 2163 0.792 - 0.792 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
54. hoxc11a ENSDARG00000070351 1783 0.792 - - - - - - 0.792 - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
55. dicer1 ENSDARG00000001129, ENSDARG00000109655 1811 0.792 - - - - - - 0.792 - - dicer 1, ribonuclease type III [Source:ZFIN;Acc:ZDB-GENE-030131-3445]
56. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 0.791 - 0.791 - - - - - - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
57. kif23 ENSDARG00000014943, ENSDARG00000116561 845 0.79 - - - 0.790 - - - - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
58. znf644a ENSDARG00000101361 819 0.79 - - - - - 0.790 - - - zinc finger protein 644a [Source:ZFIN;Acc:ZDB-GENE-030131-6244]
59. FSD2 518 0.79 - 0.790 - - - - - - - fibronectin type III and SPRY domain containing 2
60. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 0.789 - 0.789 - - - - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
61. foxk1 ENSDARG00000037872 147 0.789 - 0.789 - - - - - - - forkhead box K1 [Source:ZFIN;Acc:ZDB-GENE-030131-6402]
62. stx16 ENSDARG00000003307, ENSDARG00000112974 487 0.789 0.789 - - - - - - - - syntaxin 16 [Source:ZFIN;Acc:ZDB-GENE-060810-113]
63. myoz2b ENSDARG00000037266 2139 0.788 - 0.788 - - - - - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
64. surf4 ENSDARG00000104647 4203 0.788 - 0.788 - - - - - - - surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
65. wdr36 ENSDARG00000004774 887 0.787 - 0.787 - - - - - - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
66. kcnn3 ENSDARG00000019753 461 0.786 - 0.786 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 [Source:ZFIN;Acc:ZDB-GENE-100921-56]
67. gmpr ENSDARG00000016160 1537 0.785 - 0.785 - - - - - - - guanosine monophosphate reductase [Source:ZFIN;Acc:ZDB-GENE-050522-48]
68. tmem248 ENSDARG00000018825 1560 0.785 - - - - - - 0.785 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
69. ctsz ENSDARG00000043081 1073 0.785 - - - - - - 0.785 - - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
70. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.784 - 0.784 - - - - - - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
71. slc7a6os ENSDARG00000010596 1599 0.784 - 0.784 - - - - - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
72. mfn1b ENSDARG00000079219 1699 0.783 - 0.783 - - - - - - - mitofusin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1553]
73. DALRD3 ENSDARG00000068602 3062 0.782 0.782 - - - - - - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
74. alpk2 ENSDARG00000079637 1483 0.782 - 0.782 - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
75. fryb ENSDARG00000056001, ENSDARG00000110169 307 0.781 0.781 - - - - - - - - furry homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080215-5]
76. sash1a ENSDARG00000007179 2497 0.781 - - - - - - 0.781 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
77. ryr1a ENSDARG00000011422 2377 0.78 - 0.780 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
78. CABIN1 ENSDARG00000079326 905 0.78 0.780 - - - - - - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
79. cdkal1 ENSDARG00000104848 2102 0.78 - 0.780 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
80. senp3b ENSDARG00000056741 1296 0.78 - - - - - - 0.780 - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
81. gpatch11 ENSDARG00000026892 1360 0.78 0.780 - - - - - - - - G patch domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040718-89]
82. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.779 - - - - - - 0.779 - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
83. ppargc1a ENSDARG00000067829 772 0.779 - 0.779 - - - - - - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
84. gnl3 ENSDARG00000006219 3854 0.779 - 0.779 - - - - - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
85. megf10 ENSDARG00000017229 656 0.779 - 0.779 - - - - - - - multiple EGF-like-domains 10 [Source:ZFIN;Acc:ZDB-GENE-080506-1]
86. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 0.778 - 0.778 - - - - - - - fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
87. mrps9 ENSDARG00000061505 1636 0.778 - 0.778 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
88. timm13 ENSDARG00000058297 4447 0.778 - 0.778 - - - - - - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
89. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.778 - 0.778 - - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
90. SNORA54 SNORA54 232 0.777 0.777 - - - - - - - -
91. cerk ENSDARG00000069169 897 0.777 - - - - - - 0.777 - - ceramide kinase [Source:ZFIN;Acc:ZDB-GENE-041210-210]
92. nudt3a ENSDARG00000016256 2713 0.776 - 0.776 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
93. mthfr ENSDARG00000053087 373 0.776 - 0.776 - - - - - - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
94. limch1b ENSDARG00000103774 1087 0.776 - 0.776 - - - - - - - LIM and calponin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9210]
95. MAD2L2_1 MAD2L2_1 705 0.775 - - - 0.775 - - - - -
96. NAV2 NAV2 538 0.775 - 0.775 - - - - - - -
97. palld ENSDARG00000040009 2381 0.775 - 0.775 - - - - - - - palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
98. PTPLA PTPLA 4044 0.775 - 0.775 - - - - - - -
99. rab14_1 ENSDARG00000074246 481 0.775 0.775 - - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
100. sf3b4 ENSDARG00000018574 7470 0.774 - 0.774 - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]

There are 449 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA