Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snx12

Gene Name Gene ID Reads Annotation
snx12 ENSDARG00000019060 9563 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]










Genes with expression patterns similar to snx12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snx12 ENSDARG00000019060 9563 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
2. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.681 - 0.981 0.814 - 0.886 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
3. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.28 - 0.815 - - 0.735 - 0.730 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
4. PLEKHG4 ENSDARG00000075964 2860 1.97 - 0.986 - - - 0.984 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
5. myh10 ENSDARG00000000103 7522 1.96 - 0.986 - - - - - - 0.974 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
6. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 1.958 - - - - - 0.981 - - 0.977 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
7. CR387996.1 ENSDARG00000097774 3037 1.955 - 0.986 - - 0.969 - - - -
8. zfyve21 ENSDARG00000027887 1687 1.947 - - - - 0.965 0.982 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
9. abl1 ENSDARG00000035187 3553 1.946 - 0.986 - - 0.960 - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
10. NDST1 NDST1 1584 1.944 - - - - 0.965 - - - 0.979
11. zgc:162967 zgc:162967 2132 1.942 - - - - 0.964 - - - 0.978
12. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.922 - - - - - 0.976 - - 0.946 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
13. nhp2l1b nhp2l1b 3898 1.914 - 0.984 - - 0.930 - - - -
14. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.913 - 0.975 0.938 - - - - - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
15. apex1 ENSDARG00000045843 6345 1.91 - - - - 0.930 - - - 0.980 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
16. sort1b ENSDARG00000056252 2652 1.909 - 0.982 0.927 - - - - - - sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
17. ctsf ENSDARG00000063095 4564 1.908 - - 0.923 - - 0.985 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
18. twf1a ENSDARG00000115712 3465 1.905 - - 0.922 - - 0.983 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
19. cks1b ENSDARG00000007971 2739 1.893 - - 0.926 - 0.967 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
20. zmat5 ENSDARG00000035434 983 1.89 - - 0.910 - - 0.980 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
21. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.89 - - 0.924 - 0.966 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
22. rpl4 ENSDARG00000041182 18655 1.884 - - - - - 0.905 - - 0.979 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
23. ivns1abpa ENSDARG00000031100 3806 1.88 - 0.990 0.890 - - - - - - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
24. zgc:195001 ENSDARG00000070484 3281 1.879 - - 0.912 - - - - - 0.967 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
25. ppp2r2d ENSDARG00000102009 5710 1.873 - - 0.899 - 0.974 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
26. cyb5a ENSDARG00000098589 9430 1.86 - - - - - 0.960 0.900 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
27. selt2 12741 1.847 - - - - 0.913 - - - 0.934 selenoprotein T, 2
28. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.843 - - 0.879 - - 0.964 - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
29. cdc42 ENSDARG00000044573 11795 1.841 - - 0.887 - - 0.954 - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
30. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.839 - - - - 0.850 0.989 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
31. ppp1cab ENSDARG00000071566 4350 1.835 - 0.987 - - - - 0.848 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
32. cstf3 ENSDARG00000018904 6111 1.834 - 0.989 - - 0.845 - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
33. lrp1b lrp1b 3216 1.83 - - 0.856 - 0.974 - - - -
34. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.829 - 0.986 0.843 - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
35. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.807 - - 0.854 - 0.953 - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
36. plcd1b ENSDARG00000034080 4074 1.807 - - 0.831 - - 0.976 - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
37. ptp4a2 ptp4a2 3196 1.799 - - - - - 0.993 0.806 - -
38. pfdn4 ENSDARG00000061228 8266 1.796 - - 0.810 - - - - - 0.986 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
39. mtmr9 ENSDARG00000015860 1339 1.78 - - - - - - 0.801 - 0.979 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
40. ncoa4 ENSDARG00000021439 4581 1.775 - - 0.925 - - - 0.850 - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
41. cbx5 ENSDARG00000061187 24026 1.774 - - - - - - 0.835 - 0.939 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
42. gtpbp4 ENSDARG00000018961 5323 1.77 - 0.920 - - 0.850 - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
43. atp5f1 16797 1.765 - 0.980 - - - 0.785 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
44. cnbpa ENSDARG00000045776 8648 1.754 - 0.934 0.820 - - - - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
45. yy1a ENSDARG00000042796 4982 1.752 - - - - 0.960 - - 0.792 - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
46. npepl1 ENSDARG00000012871 3064 1.752 - 0.894 - - - - 0.858 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
47. LEPROTL1 ENSDARG00000104871 3019 1.751 - - - - 0.957 - 0.794 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
48. tmem50a ENSDARG00000015757 3244 1.746 - - 0.924 - - - 0.822 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
49. nfe2l2a ENSDARG00000042824 1707 1.743 - - - - - 0.978 0.765 - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
50. arf1l arf1l 9119 1.742 - - - - - 0.946 0.796 - -
51. phb ENSDARG00000057414 9551 1.74 - - 0.789 - - 0.951 - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
52. ndufa1 ENSDARG00000036329, ENSDARG00000111888 18361 1.74 - 0.959 - - - - 0.781 - - NADH:ubiquinone oxidoreductase subunit A1 [Source:ZFIN;Acc:ZDB-GENE-040625-168]
53. tmem134 ENSDARG00000024828 3241 1.736 - - - - - 0.983 0.753 - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
54. ubtf ENSDARG00000035066 4070 1.736 - - - 0.767 0.969 - - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
55. AC024175.17 AC024175.17 59065 1.731 - - - - - 0.924 0.807 - -
56. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.726 - - - - 0.963 - 0.763 - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
57. rtn3_1 ENSDARG00000091348 3290 1.726 - - - - 0.953 - 0.773 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
58. MATR3 MATR3 3962 1.72 - - - - 0.917 - 0.803 - -
59. lmnb1 ENSDARG00000044299 9817 1.72 - - 0.894 - - - 0.826 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
60. nme3 ENSDARG00000100990 3889 1.717 - 0.986 - - 0.731 - - - - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
61. rabgef1 ENSDARG00000014430 1176 1.716 - - - - - 0.985 0.731 - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
62. lsm7 ENSDARG00000058328 7191 1.715 - - 0.911 - 0.804 - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
63. hexim1 ENSDARG00000036482 4317 1.713 - - 0.939 - - - 0.774 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
64. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.709 - - 0.726 - - 0.983 - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
65. padi2 ENSDARG00000044167 6765 1.704 - - - - - 0.896 0.808 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
66. fkbp14 ENSDARG00000040695 7725 1.704 - - 0.740 - - 0.964 - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
67. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.701 - - - - - - 0.720 - 0.981 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
68. arih2 ENSDARG00000012848 7087 1.699 - 0.988 - - - - 0.711 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
69. ing2 ENSDARG00000104907 1336 1.699 - 0.986 - - - - 0.713 - - inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
70. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.697 - - - - 0.959 - 0.738 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
71. ndfip2 ENSDARG00000033928 3129 1.696 - - - - 0.937 - 0.759 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
72. sdc4 ENSDARG00000059906 10105 1.696 - - 0.915 - - - 0.781 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
73. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.696 - - - - 0.965 - 0.731 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
74. bckdk ENSDARG00000016904 3775 1.695 - - - - 0.960 - 0.735 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
75. rbfox2 ENSDARG00000052182 6621 1.694 - - 0.717 - - 0.977 - - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
76. boc ENSDARG00000074335 4832 1.688 - - - - 0.963 - 0.725 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
77. zgc:55512 zgc:55512 4436 1.687 - - - - 0.968 - 0.719 - -
78. atp2b4 5891 1.686 - - 0.834 - - - 0.852 - - ATPase, Ca++ transporting, plasma membrane 4
79. hmgb2b ENSDARG00000053990 11519 1.685 - - - - - 0.968 0.717 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
80. CPEB2 ENSDARG00000052604 2646 1.684 - - - - 0.970 - 0.714 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
81. col4a6 ENSDARG00000052061 8636 1.683 - - - - 0.930 - 0.753 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
82. dnmt3 dnmt3 1912 1.683 - - - 0.737 0.946 - - - -
83. psmc2 ENSDARG00000020101 8095 1.681 - 0.956 - - - - 0.725 - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
84. smc1al ENSDARG00000058203 8838 1.68 - - - - 0.938 - 0.742 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
85. sltm ENSDARG00000052728 6234 1.675 - - 0.956 - - - 0.719 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
86. pola2 ENSDARG00000015070 2286 1.674 - - 0.939 - - - 0.735 - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
87. ARHGEF5 2727 1.673 - - - - - 0.895 0.778 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
88. tmem2 2572 1.66 - - 0.946 - - - 0.714 - - transmembrane protein 2, transcript variant X1
89. MSL1_1 MSL1_1 2365 1.66 - - 0.953 - - - 0.707 - -
90. ndufs5 ENSDARG00000006290 15918 1.658 - - 0.881 - - - - - 0.777 NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
91. ube4b ENSDARG00000037017 8012 1.656 - - 0.940 - - - 0.716 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
92. polr2d ENSDARG00000076509 3386 1.643 - - 0.938 - - - 0.705 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
93. lsm12b ENSDARG00000109510 14459 1.641 - - 0.802 - - 0.839 - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
94. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.636 - - - - - 0.885 0.751 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
95. axin2 ENSDARG00000100149 4223 1.635 - - 0.927 0.708 - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
96. pum1 ENSDARG00000099256 5017 1.63 - - 0.891 - - - 0.739 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
97. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.628 - - 0.857 - - - 0.771 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
98. ctnna1 ENSDARG00000102441 7984 1.618 - - 0.823 - - - 0.795 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
99. TNRC6A ENSDARG00000079688 14433 1.615 - - - - - - 0.753 - 0.862 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
100. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.615 - - 0.912 - - - 0.703 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]

There are 1352 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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