Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snrpf

Gene Name Gene ID Reads Annotation
snrpf ENSDARG00000105037 10241 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]










Genes with expression patterns similar to snrpf

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpf ENSDARG00000105037 10241 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
2. MKI67 ENSDARG00000091150 11038 3.878 0.710 - - 0.787 0.797 0.794 0.790 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
3. cdca7a ENSDARG00000077620 9345 3.266 - - 0.975 0.794 - 0.755 - - 0.742 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
4. SERBP1 SERBP1 9276 3.261 - 0.817 - - - 0.846 0.873 - 0.725
5. tmpob ENSDARG00000022978 8121 3.175 - 0.776 - 0.815 - - 0.796 0.788 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
6. srsf5a ENSDARG00000029818 15600 3.12 0.850 - - 0.752 0.804 0.714 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
7. sumo3a ENSDARG00000028119 13447 3.096 0.735 - - 0.711 - 0.776 0.874 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. brd7 ENSDARG00000008380 3654 3.091 - 0.743 - - 0.745 - 0.830 - 0.773 bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
9. khsrp ENSDARG00000026489 15738 3.084 0.742 - - - - 0.824 0.815 0.703 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
10. hmgb1b ENSDARG00000030479 10398 3.083 0.727 - - - 0.802 - 0.781 0.773 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
11. smc1al ENSDARG00000058203 8838 3.03 0.721 0.768 - - - 0.740 0.801 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
12. zgc:158409 zgc:158409 21963 3.021 - 0.781 - 0.773 - 0.714 - 0.753 -
13. elof1 ENSDARG00000099453 6176 3.018 - 0.726 - - - 0.816 0.752 0.724 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
14. ezh2 ENSDARG00000010571 3273 3.016 0.728 - - 0.733 0.818 - 0.737 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
15. prmt1 ENSDARG00000010246 11311 2.998 0.713 0.741 - - - 0.707 0.837 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
16. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 2.988 - 0.741 - - 0.751 0.770 0.726 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
17. SNRPG ENSDARG00000099667 18697 2.954 - 0.759 - 0.720 - 0.719 0.756 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
18. fubp1 ENSDARG00000029248 15259 2.638 - - 0.971 0.790 0.877 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
19. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.62 - 0.818 0.962 - - - 0.840 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
20. brd3b ENSDARG00000100129 6387 2.543 - 0.933 - - - 0.775 0.835 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
21. srsf2a ENSDARG00000057484 25721 2.501 - - 0.937 0.811 - - - 0.753 - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
22. puf60b ENSDARG00000001241 13827 2.501 - - 0.941 0.783 - 0.777 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
23. smarce1 ENSDARG00000016871 9628 2.473 - - - - 0.811 0.790 0.872 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
24. ddx39ab ENSDARG00000015111 11619 2.459 0.792 - - - - - 0.901 0.766 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
25. h2afvb ENSDARG00000116491 35692 2.434 0.839 0.714 - - - 0.881 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
26. vdac1 ENSDARG00000045132 8051 2.431 0.771 - - - - 0.829 0.831 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
27. snrpb ENSDARG00000011125 11729 2.431 - - - 0.739 0.889 - 0.803 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
28. nop58 ENSDARG00000104353 8497 2.428 0.718 - 0.978 - - - 0.732 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
29. stmn1a ENSDARG00000004169 21169 2.416 0.791 0.755 - - - - 0.870 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
30. elavl1 11672 2.402 - - - - - 0.786 - 0.793 0.823 ELAV like RNA binding protein 1, transcript variant X3
31. cdkn2aipnl ENSDARG00000053395 5107 2.396 0.801 0.769 - - 0.826 - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
32. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.395 - - - 0.846 - - 0.830 0.719 - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
33. atf7ip ENSDARG00000069619 5495 2.389 0.722 - - - - - 0.832 - 0.835 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
34. srsf6b ENSDARG00000016783 9926 2.383 - - - 0.804 - 0.765 0.814 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
35. tra2a ENSDARG00000007863 4449 2.375 - - - 0.739 - 0.902 0.734 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
36. mllt10 ENSDARG00000045401 7557 2.367 0.775 - - - - 0.807 0.785 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
37. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.364 - - - - 0.753 0.747 0.864 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
38. hnrnpr ENSDARG00000014569 3423 2.361 - - - 0.711 - - 0.806 - 0.844 heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
39. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 2.36 0.805 - 0.854 0.701 - - - - -
40. GABARAP GABARAP 8341 2.36 - 0.727 - - - 0.838 0.795 - -
41. hnrnpub ENSDARG00000004735 16496 2.355 0.730 - - 0.816 - - 0.809 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
42. smarcd1 ENSDARG00000019004 6028 2.354 - - - 0.791 - 0.725 0.838 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
43. zgc:77262 ENSDARG00000044545 5563 2.349 - - - - 0.795 - 0.764 0.790 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
44. myef2 ENSDARG00000059398 6050 2.349 - - - 0.719 - 0.815 0.815 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
45. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 2.339 - 0.758 - 0.749 - - 0.832 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
46. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.335 - - - 0.796 - 0.784 0.755 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
47. rsl24d1 ENSDARG00000040439 13537 2.333 0.785 - - - - - - 0.725 0.823 ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
48. ubtf ENSDARG00000035066 4070 2.327 0.730 0.743 - - - - 0.854 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
49. hn1b hn1b 7325 2.32 0.752 - - - - 0.731 0.837 - -
50. prp19 prp19 4804 2.314 - - - 0.748 - 0.822 - 0.744 -
51. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.312 - 0.788 - 0.782 - 0.742 - - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
52. uba1 ENSDARG00000037559 11579 2.312 - 0.751 - - - 0.735 0.826 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
53. si:ch211-51e12.7 ENSDARG00000045914 9598 2.309 0.711 - - 0.806 - 0.792 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
54. znf292b ENSDARG00000043973 3791 2.308 - - - - - 0.797 0.805 0.706 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
55. rnf2 ENSDARG00000010381 3427 2.308 0.734 - - - - 0.828 0.746 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
56. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.305 - - - - 0.821 0.706 0.778 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
57. txnl4a ENSDARG00000036190 2048 2.297 0.712 - - - - - 0.883 0.702 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
58. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.295 0.702 - - 0.769 - - 0.824 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
59. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 2.292 - - - - 0.812 - 0.734 0.746 - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
60. si:dkey-67c22.2 ENSDARG00000055389 6410 2.285 - - - 0.736 - 0.755 0.794 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
61. puf60a ENSDARG00000032175 5618 2.284 - 0.709 - 0.747 - - 0.828 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
62. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 2.282 - 0.716 - - - - 0.844 - 0.722 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
63. tdg tdg 3269 2.279 - - - - 0.800 - 0.714 - 0.765
64. cltca ENSDARG00000043493, ENSDARG00000115370 12561 2.273 0.720 - - - - - 0.784 - 0.769 clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
65. pl10 pl10 10795 2.268 - 0.809 - - - 0.706 0.753 - -
66. edf1 ENSDARG00000009950 10518 2.268 0.795 0.725 - - 0.748 - - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
67. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.264 - - - 0.725 - 0.725 0.814 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
68. cpsf6 ENSDARG00000018618 3923 2.258 - 0.755 - 0.745 - - 0.758 - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
69. prpf8 ENSDARG00000026180 7026 2.258 0.799 0.748 - 0.711 - - - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
70. eif3m ENSDARG00000013931 8117 2.252 0.730 0.783 - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
71. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 2.249 - 0.789 - - 0.756 - 0.704 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
72. lypla2 ENSDARG00000053656 8971 2.247 - 0.741 - - - 0.716 0.790 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
73. hnrnpm ENSDARG00000061735 19428 2.246 - 0.731 - 0.789 - - - 0.726 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
74. ubap2 ubap2 4167 2.244 - 0.733 - - - 0.734 0.777 - -
75. ppm1g ENSDARG00000075559 6516 2.24 0.735 0.717 - 0.788 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
76. g3bp1 ENSDARG00000017741 7622 2.239 - - - - - 0.704 0.797 0.738 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
77. snrpc ENSDARG00000009871 9567 2.237 0.713 - - 0.806 - - 0.718 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
78. anp32e ENSDARG00000054804 11017 2.224 0.767 0.719 - - - - 0.738 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
79. pak2b ENSDARG00000018476 4331 2.224 - 0.703 - - - 0.731 0.790 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
80. celf1 ENSDARG00000005315 5598 2.216 0.724 - - - - 0.756 0.736 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
81. CYTH2 ENSDARG00000028800 2349 2.21 - - - - - 0.719 0.718 0.773 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
82. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 2.199 - - - - 0.731 0.740 0.728 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
83. nap1l4b ENSDARG00000068868 3285 2.195 - 0.702 - - - 0.784 0.709 - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
84. chtopa ENSDARG00000057234 3287 2.194 - 0.755 - - - - 0.737 - 0.702 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
85. khdrbs1b ENSDARG00000070475 18157 2.182 0.711 - - 0.720 - - - 0.751 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
86. mapk6 ENSDARG00000032103 6422 2.176 - - - - 0.733 0.704 - 0.739 - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
87. kmt2bb ENSDARG00000060697 5230 2.127 - 0.700 - - 0.713 0.714 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
88. snrpa1 ENSDARG00000024651 3306 1.825 - - 0.980 - - 0.845 - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
89. ACTN4_1 ACTN4_1 8550 1.777 - - 0.966 - 0.811 - - - -
90. hars ENSDARG00000003693 7217 1.772 - - 0.965 - 0.807 - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
91. smyd1b ENSDARG00000091253 4964 1.763 - 0.790 0.973 - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
92. ddah2 ENSDARG00000105009 4570 1.746 - - 0.981 - - 0.765 - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
93. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.742 - 0.762 0.980 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
94. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.738 - 0.756 0.982 - - - - - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
95. si:rp71-45k5.4 ENSDARG00000035679 10411 1.736 - - 0.977 - - 0.759 - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
96. dusp11 ENSDARG00000038156 2490 1.732 - - 0.981 - 0.751 - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
97. ptenb ENSDARG00000056623 5783 1.73 - - - - - 0.832 0.898 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
98. mknk2b ENSDARG00000015164 2158 1.721 - 0.741 0.980 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
99. cltcb ENSDARG00000090716 5544 1.72 - - - - - 0.789 0.931 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
100. ogdha ENSDARG00000034270 10334 1.701 - 0.742 0.959 - - - - - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]

There are 1497 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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