Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snrpe

Gene Name Gene ID Reads Annotation
snrpe ENSDARG00000033175 7462 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]










Genes with expression patterns similar to snrpe

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpe ENSDARG00000033175 7462 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
2. pa2g4b ENSDARG00000070657 7999 3.481 - 0.811 0.924 0.965 - - 0.781 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
3. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 3.268 0.743 0.781 - 0.962 - - - - 0.782 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
4. prmt1 ENSDARG00000010246 11311 3.26 0.842 0.756 - - - - 0.836 - 0.826 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
5. ipo7 ENSDARG00000035751 7095 3.189 - 0.796 0.864 - 0.813 - 0.716 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
6. h2afvb ENSDARG00000116491 35692 3.162 0.799 0.737 - - - 0.832 - 0.794 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
7. ilf3b ENSDARG00000105177 9473 3.126 - - - - - 0.765 0.723 0.777 0.861 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
8. psma3 ENSDARG00000086618 6200 2.666 0.765 - 0.936 0.965 - - - - - proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
9. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.646 - - - 0.979 - - - 0.799 0.868 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
10. nol12 ENSDARG00000038027 2288 2.632 - 0.735 - 0.955 0.942 - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
11. si:ch211-11k18.4 ENSDARG00000087869 3298 2.611 - - 0.867 0.959 - - 0.785 - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
12. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 2.608 - 0.757 - 0.948 - - 0.903 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
13. cdkal1 ENSDARG00000104848 2102 2.596 - 0.792 - 0.946 - - - - 0.858 CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
14. CCDC71 CCDC71 2442 2.584 - - - - 0.979 - - 0.719 0.886
15. maf1 ENSDARG00000013122 3365 2.577 - - - - 0.979 - 0.711 - 0.887 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
16. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.575 - - - - 0.976 0.823 0.776 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
17. cpsf3 ENSDARG00000027649 6897 2.572 - - - - 0.946 - 0.772 - 0.854 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
18. hdac1 ENSDARG00000015427 19804 2.537 0.844 - - 0.898 - 0.795 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
19. zgc:110540 ENSDARG00000054929 2154 2.531 - - - 0.944 - - 0.711 0.876 - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
20. snrpc ENSDARG00000009871 9567 2.524 0.744 - - - 0.908 - 0.872 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
21. eef1b2 ENSDARG00000044521 26570 2.494 0.734 - 0.822 0.938 - - - - - eukaryotic translation elongation factor 1 beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7310]
22. ssbp4 ENSDARG00000056483 10196 2.491 - - - - 0.851 - 0.834 0.806 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
23. smek1 ENSDARG00000042187 3509 2.472 - 0.732 - - 0.979 - 0.761 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
24. eftud2 ENSDARG00000012261 3081 2.461 0.719 0.801 - 0.941 - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
25. rfc5 ENSDARG00000035634 974 2.457 0.734 - - - 0.983 - 0.740 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
26. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.442 0.711 - - - 0.979 - - 0.752 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
27. cltcb ENSDARG00000090716 5544 2.44 - - - - 0.979 0.711 0.750 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
28. nr2f2 ENSDARG00000040926 5213 2.437 0.752 - - - - - 0.783 - 0.902 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
29. polr3e ENSDARG00000037358 1864 2.436 - 0.757 - 0.958 - - 0.721 - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
30. Sep-02 Sep-02 10074 2.427 - - - - 0.930 0.715 0.782 - -
31. pl10 pl10 10795 2.411 - 0.761 - - 0.806 - 0.844 - -
32. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.392 0.751 0.806 - - - - - - 0.835 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
33. ptenb ENSDARG00000056623 5783 2.385 - - - - - 0.818 0.728 - 0.839 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
34. sumo3a ENSDARG00000028119 13447 2.384 - - 0.876 - - 0.716 0.792 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
35. g3bp1 ENSDARG00000017741 7622 2.384 - 0.815 0.849 - - 0.720 - - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
36. rrm1 ENSDARG00000014017 7296 2.383 0.783 0.756 - - - - 0.844 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
37. TACC2 1702 2.378 - - 0.930 - - 0.736 - 0.712 - transforming, acidic coiled-coil containing protein 2, transcript variant X17
38. anp32e ENSDARG00000054804 11017 2.372 0.784 0.757 - - - - 0.831 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
39. brd3b ENSDARG00000100129 6387 2.365 - 0.703 - - - 0.839 0.823 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
40. pfn2l ENSDARG00000012682 21690 2.359 0.792 - - - 0.795 - 0.772 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
41. eif2s1a ENSDARG00000005827 5992 2.348 - 0.831 - - - - 0.750 0.767 - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
42. MZT1 ENSDARG00000096668 2514 2.345 - 0.777 - - - 0.790 0.778 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
43. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.333 0.709 0.806 - - - - 0.818 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
44. srsf4 ENSDARG00000105293 9657 2.316 0.785 - - - - 0.702 0.829 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
45. wu:fb17g07 wu:fb17g07 10567 2.314 0.797 0.800 - - - - 0.717 - -
46. sarnp ENSDARG00000059357 4768 2.301 0.733 - - - - 0.757 0.811 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
47. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.294 0.734 0.753 - - - - - - 0.807 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
48. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.287 - - - 0.734 0.766 0.787 - - - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
49. psmd14 ENSDARG00000063100 15711 2.275 0.777 - - - - 0.741 - - 0.757 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
50. cdca8 ENSDARG00000043137 7541 2.253 - - - - - 0.726 0.826 0.701 - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
51. elof1 ENSDARG00000099453 6176 2.237 0.733 - - - - 0.701 0.803 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
52. SERBP1 SERBP1 9276 2.232 - 0.732 - - - 0.798 0.702 - -
53. nhp2 ENSDARG00000069422 9925 2.222 - - - - 0.709 - 0.794 0.719 - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
54. hnrnpub ENSDARG00000004735 16496 2.221 0.761 - 0.749 - - - 0.711 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
55. cth ENSDARG00000074301 3860 2.213 0.707 0.771 - - - 0.735 - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
56. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 2.21 - 0.706 - - - - 0.768 0.736 - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
57. carm1 ENSDARG00000018698 5599 2.197 - 0.723 - - - 0.710 0.764 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
58. hoxa9b ENSDARG00000056819 3081 2.186 0.708 - - - - 0.756 0.722 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
59. rqcd1 2301 2.184 0.703 - - - - 0.716 0.765 - - RCD1 required for cell differentiation1 homolog (S. pombe)
60. lfng ENSDARG00000037879 11783 2.164 0.732 0.718 - - - 0.714 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
61. rnmt ENSDARG00000070553 1743 2.154 0.711 0.718 - - - - 0.725 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
62. prpf8 ENSDARG00000026180 7026 2.137 0.713 0.706 - - - - - - 0.718 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
63. nmt1a ENSDARG00000052966 5918 1.925 - - 0.974 0.951 - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
64. dnttip2 ENSDARG00000057648 2381 1.908 - - - 0.956 0.952 - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
65. arl14ep ENSDARG00000001210 3029 1.875 - - - - 0.981 - - - 0.894 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
66. commd4 ENSDARG00000061946 3281 1.844 - - - - 0.980 - - - 0.864 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
67. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1.844 - - - - 0.980 - - - 0.864 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
68. sdha ENSDARG00000016721 8255 1.838 - - - 0.894 0.944 - - - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
69. efnb3b ENSDARG00000042277 5823 1.82 - - - 0.938 - 0.882 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
70. ash2l ENSDARG00000060392 4916 1.8 - - - - 0.977 - 0.823 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
71. fscn1a ENSDARG00000059680 3999 1.79 - - 0.939 - - - - 0.851 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
72. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.78 - 0.805 - - 0.975 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
73. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1.772 - 0.799 - - 0.973 - - - -
74. timm10 ENSDARG00000069116 4459 1.771 - - - - 0.963 - - - 0.808 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
75. fkbp3 ENSDARG00000098059 5428 1.767 - - - - 0.956 - 0.811 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
76. nusap1 ENSDARG00000002403 6953 1.765 - - - 0.974 - 0.791 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
77. polr1a ENSDARG00000098375 1224 1.763 - 0.806 - 0.957 - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
78. h3f3a 66671 1.763 - - - - - - 0.863 0.900 - H3 histone, family 3A, transcript variant X1
79. ing4 ENSDARG00000030716 5908 1.761 - - 0.968 - - 0.793 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
80. IDH2 ENSDARG00000003795 18659 1.758 - - - 0.814 0.944 - - - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
81. kpna3 ENSDARG00000052641 5347 1.757 - 0.841 - - - - - - 0.916 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
82. fzr1 fzr1 2984 1.755 - - - 0.954 - 0.801 - - -
83. arglu1a ENSDARG00000019223 8716 1.753 - 0.804 - - 0.949 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
84. ubap2 ubap2 4167 1.746 - - - 0.961 - 0.785 - - -
85. ppa1b ENSDARG00000030441 9027 1.743 - - - - 0.941 - - - 0.802 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
86. emilin3a ENSDARG00000078052 1652 1.739 - - 0.940 - 0.799 - - - - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
87. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.738 - - - 0.945 - - 0.793 - - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
88. EEF1E1 ENSDARG00000071774 3806 1.736 - 0.846 - - - - - - 0.890 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
89. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.736 - 0.879 - 0.857 - - - - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
90. pds5b ENSDARG00000098897 1732 1.735 - - - - 0.983 - 0.752 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
91. rbb4 rbb4 15541 1.732 - - - 0.907 - - 0.825 - -
92. rcor2 ENSDARG00000008278 1678 1.73 - - - - - - - 0.825 0.905 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
93. wsb1 ENSDARG00000021343 3828 1.727 - - - - 0.950 - 0.777 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
94. mxd3 ENSDARG00000098350 3040 1.724 - - - 0.959 - - 0.765 - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
95. vldlr ENSDARG00000006257 772 1.724 - - - - 0.979 - - 0.745 - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
96. celf3a ENSDARG00000034668 2432 1.721 - - - 0.966 - - - 0.755 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
97. rbm8a ENSDARG00000016516 8789 1.721 - - 0.942 - - - 0.779 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
98. anp32b ENSDARG00000023330 25013 1.721 - - - 0.960 - - 0.761 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
99. sulf2l sulf2l 4980 1.716 - - - 0.957 - - - 0.759 -
100. vps25 ENSDARG00000059079 3747 1.715 - - - - 0.970 - 0.745 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]

There are 2026 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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