Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrpd3

Gene Name Gene ID Reads Annotation
snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]










Genes with expression patterns similar to snrpd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
2. CABZ01111990.1 CABZ01111990.1 4374 2.569 - - - 0.998 - - - 0.801 0.770
3. pvrl1b 1645 2.507 - 0.852 - - - 0.848 - - 0.807 poliovirus receptor-related 1b
4. ranbp1 ENSDARG00000014817 3371 2.456 - - 0.719 0.999 - - - 0.738 - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
5. ccnb1 ENSDARG00000051923 3226 2.447 - 0.755 - - - 0.874 0.818 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
6. CWC15 ENSDARG00000013382 8969 1.944 - - - 0.994 - - 0.950 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
7. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 1.874 - 0.889 - - - - 0.985 - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
8. sp8a ENSDARG00000011870 1075 1.866 - 0.886 - - - - 0.980 - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
9. ptp4a3 ENSDARG00000039997 1964 1.866 - - - - - 0.887 0.979 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
10. arid1aa ENSDARG00000101710 3644 1.865 - 0.884 - - - - 0.981 - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
11. ankrd6b ENSDARG00000029370 429 1.864 - - - - - 0.877 0.987 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
12. cnot3a ENSDARG00000007135 3084 1.855 - - - - - - 0.985 - 0.870 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
13. C2H6orf52 C2H6orf52 2847 1.855 - - - - - 0.869 0.986 - -
14. tox3 ENSDARG00000073957 3075 1.853 - - - 0.999 - - - - 0.854 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
15. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.832 - - - - - 0.847 0.985 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
16. b2ml ENSDARG00000015887 1060 1.828 - 0.852 - - - - 0.976 - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
17. hiat1a ENSDARG00000013117 607 1.819 - - - - - 0.832 0.987 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
18. ncoa6 ENSDARG00000071272 759 1.81 - - - - - - 0.986 - 0.824 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
19. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.803 - - - - - 0.864 0.939 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
20. loxl2b ENSDARG00000044074 1919 1.792 - 0.804 - - - - 0.988 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
21. cacna1ba ENSDARG00000021735 870 1.786 - - - - - - 0.988 - 0.798 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
22. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.785 - - - - - 0.905 - - 0.880 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
23. ik ENSDARG00000004161 3132 1.783 - - - - - 0.931 - - 0.852 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
24. ppapdc1b ppapdc1b 2866 1.783 - - - - - 0.813 0.970 - -
25. cdc34b ENSDARG00000012627 3879 1.779 - - - - - 0.911 - - 0.868 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
26. calub ENSDARG00000005115 1478 1.778 - 0.790 - - - - 0.988 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
27. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.776 - - - - - - 0.984 - 0.792 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
28. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.773 - - - 0.985 - 0.788 - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
29. clica clica 6206 1.773 - 0.798 - - - - 0.975 - -
30. tpx2 ENSDARG00000078654 8120 1.771 - 0.775 - 0.996 - - - - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
31. bc2 5213 1.767 - - - - - 0.820 0.947 - - putative breast adenocarcinoma marker
32. alpi.1 ENSDARG00000015273 1712 1.761 - 0.777 - - - - 0.984 - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
33. gpc4 ENSDARG00000015472 2529 1.757 - - - - - 0.793 0.964 - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
34. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.755 - - - - - 0.893 - - 0.862 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
35. wfdc2 ENSDARG00000089187 653 1.753 - - - - - 0.779 0.974 - - WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
36. pex13 ENSDARG00000071037 738 1.748 - - - - - 0.894 - - 0.854 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
37. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.744 - - - - - 0.885 - - 0.859 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
38. kmt2e ENSDARG00000007523 1851 1.743 - 0.807 - - - 0.936 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
39. QPCT ENSDARG00000089717 1383 1.737 - 0.816 - - - - 0.921 - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
40. rbm34 ENSDARG00000101877 1573 1.729 - - - - - 0.894 - - 0.835 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
41. rwdd ENSDARG00000068256 964 1.726 - - - - - 0.899 - - 0.827 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
42. lsm4 ENSDARG00000023852 6083 1.721 - - - - - - 0.961 0.760 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
43. ngly1 ENSDARG00000003205 733 1.715 - - - - - 0.882 - - 0.833 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
44. gid8b ENSDARG00000037589 2121 1.715 - - - - - 0.874 - - 0.841 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
45. ints8 ENSDARG00000057986 1063 1.714 - 0.840 - - - - - - 0.874 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
46. dhrs13a.2 ENSDARG00000111240 491 1.713 - - - - - 0.869 - - 0.844 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
47. fahd1 ENSDARG00000031657 521 1.711 - 0.730 - - - - 0.981 - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
48. myo9b ENSDARG00000077410 1956 1.707 - 0.740 - - - - 0.967 - - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
49. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.702 - 0.708 - - - - 0.994 - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
50. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.695 - - - 0.994 - - - 0.701 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
51. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.689 - - - - - - 0.974 0.715 - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
52. srek1ip1 ENSDARG00000043728 985 1.688 - - - - - 0.857 - - 0.831 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
53. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.676 - 0.802 - - - 0.874 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
54. nod2 ENSDARG00000010756 294 1.675 - - - - - 0.847 - - 0.828 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
55. dock7 ENSDARG00000078675 1995 1.674 - 0.814 - - - - - - 0.860 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
56. gpr143 ENSDARG00000034572 559 1.673 - - - - - 0.850 - - 0.823 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
57. dbnla ENSDARG00000008170 2129 1.672 - - - - - 0.856 0.816 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
58. TNPO2 ENSDARG00000042887 2290 1.67 - 0.796 - - - - - - 0.874 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
59. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.668 - 0.788 - - - 0.880 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
60. hic1l ENSDARG00000045660 1489 1.667 - 0.796 - - - - - - 0.871 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
61. C2CD2 ENSDARG00000105000 2573 1.664 - - - - - 0.841 0.823 - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
62. ppp1r12a ENSDARG00000010784 4333 1.642 - - - - - 0.905 - - 0.737 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
63. tom1 ENSDARG00000104581 1457 1.639 - - - - - 0.844 - - 0.795 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
64. tgm1 ENSDARG00000017799 442 1.637 - 0.836 - - - 0.801 - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
65. psmc3 ENSDARG00000007141 5592 1.637 - - - - - - - 0.744 0.893 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
66. bnip3la ENSDARG00000025468 3097 1.635 - 0.799 - - - - - - 0.836 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
67. PRSS23 ENSDARG00000055786 564 1.632 - 0.788 - - - 0.844 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
68. hspa5 ENSDARG00000103846 4661 1.628 - 0.800 - - - - - - 0.828 heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
69. CU861453.1 ENSDARG00000097192 271 1.626 - 0.815 - - - - - - 0.811
70. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.625 - 0.768 - - - - - - 0.857 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
71. si:dkey-27i16.3 si:dkey-27i16.3 494 1.624 - 0.770 - - - 0.854 - - -
72. ZNF281 ZNF281 1946 1.624 - 0.836 - - - 0.788 - - -
73. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.621 - 0.798 - - - - - - 0.823 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
74. brd1b ENSDARG00000051798 1712 1.621 - 0.733 - - - 0.888 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
75. myl9b ENSDARG00000008030 7830 1.618 - 0.764 - - - - 0.854 - - myosin, light chain 9b, regulatory [Source:ZFIN;Acc:ZDB-GENE-040426-2296]
76. cdkn2c ENSDARG00000057610 179 1.617 - 0.758 - - - 0.859 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
77. mrpl3 ENSDARG00000103318 2308 1.616 - - - - - 0.785 - - 0.831 mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
78. ARID3A ENSDARG00000070843 1613 1.614 - 0.815 - - - - - - 0.799 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
79. TRIP10 TRIP10 1079 1.613 - - - - - 0.815 - - 0.798
80. aldh16a1 ENSDARG00000037935 617 1.611 - 0.796 - - - - - - 0.815 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
81. pspc1 ENSDARG00000006621 966 1.61 - - 0.744 - - - - - 0.866 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
82. ldb1a ENSDARG00000010137 3035 1.61 - 0.823 - - - - - 0.787 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
83. smg1 ENSDARG00000054570, ENSDARG00000116568 1271 1.609 - 0.764 - - - 0.845 - - - SMG1 phosphatidylinositol 3-kinase-related kinase [Source:ZFIN;Acc:ZDB-GENE-061013-767]
84. actn1 ENSDARG00000007219 2919 1.599 - - - - - 0.753 0.846 - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
85. supt16h ENSDARG00000079949 4755 1.596 - - - - - - - 0.731 0.865 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
86. taz ENSDARG00000041421 985 1.595 - - - - - 0.739 - - 0.856 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
87. FOXO4 ENSDARG00000055792 1457 1.595 - 0.835 - - - - - - 0.760 forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
88. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.595 - - - - - - - 0.740 0.855 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
89. wif1 ENSDARG00000005541 1689 1.594 - 0.825 - - - - - - 0.769 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
90. bcas2 ENSDARG00000043631 1971 1.588 - - - - - 0.870 - 0.718 - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
91. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 1.586 - 0.862 - - - - - 0.724 - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
92. laptm4a ENSDARG00000006397 1698 1.58 - 0.768 - - - 0.812 - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
93. cpsf1 ENSDARG00000034178 2036 1.58 - - - - - - - 0.723 0.857 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
94. vdac1 ENSDARG00000045132 8051 1.579 - 0.800 - - - - - - 0.779 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
95. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.575 - - - - - - - 0.765 0.810 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
96. PWWP2A ENSDARG00000075526 2163 1.569 - - - - - 0.857 - 0.712 - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
97. nrm ENSDARG00000063690 1371 1.568 - - - - - 0.825 - - 0.743 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
98. slbp ENSDARG00000100558 3405 1.565 - 0.779 - - - - - - 0.786 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
99. stk10 ENSDARG00000101894 1587 1.563 - 0.737 - - - 0.826 - - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
100. slc39a9 ENSDARG00000070447 971 1.561 - 0.734 - - - - - - 0.827 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]

There are 1899 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA