Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snrpd2

Gene Name Gene ID Reads Annotation
snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]










Genes with expression patterns similar to snrpd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
2. SLC12A6 SLC12A6 883 2.544 - 0.983 - - - 0.777 0.784 - -
3. maea ENSDARG00000053691 1840 2.493 - 0.990 - - - 0.768 - - 0.735 macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
4. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.492 - 0.945 - - - - 0.759 0.788 - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
5. vgll4b ENSDARG00000103730 5266 2.44 - - - - - 0.824 0.853 0.763 - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
6. psma2 ENSDARG00000040121 2504 2.43 0.739 - - - - 0.760 0.931 - - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
7. ddx39ab ENSDARG00000015111 11619 2.418 - - - - - - 0.735 0.883 0.800 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
8. cdca8 ENSDARG00000043137 7541 2.359 - - - 0.703 - 0.844 0.812 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
9. hdac1 ENSDARG00000015427 19804 2.337 0.730 - - - - - - 0.833 0.774 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
10. srrm1 ENSDARG00000001244 4972 2.32 - - - - - - 0.820 0.712 0.788 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
11. eif4a3 ENSDARG00000102978 16162 2.267 0.708 - - - - 0.782 - 0.777 - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
12. whsc1l1 8544 2.244 - - - - - - 0.817 0.710 0.717 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
13. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 2.23 0.779 - 0.709 - - - 0.742 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
14. rtn3_1 ENSDARG00000091348 3290 1.85 - 0.965 - - - - 0.885 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
15. sltm ENSDARG00000052728 6234 1.827 - 0.988 - - - - 0.839 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
16. CR293507.1 ENSDARG00000112572 3198 1.795 - 0.979 - - - - - - 0.816
17. gle1 ENSDARG00000043559 1362 1.786 - 0.979 - - - - 0.807 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
18. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.781 - 0.983 - - - - - - 0.798 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
19. marveld2a ENSDARG00000025076 917 1.775 - 0.980 - - - 0.795 - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
20. GATAD2B ENSDARG00000005834 3855 1.774 - 0.989 - - - - 0.785 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
21. acadvl ENSDARG00000016687 5329 1.754 - 0.979 - - - - 0.775 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
22. cdv3 ENSDARG00000023028 12380 1.747 - 0.972 - - - - 0.775 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
23. notch3 ENSDARG00000052139 15033 1.739 0.759 0.980 - - - - - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
24. snoU83B snoU83B 4666 1.738 - 0.986 - - - - 0.752 - -
25. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.732 - 0.948 - - - - 0.784 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
26. ssr3 ENSDARG00000014165, ENSDARG00000111483 1881 1.729 - 0.982 - - - 0.747 - - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
27. bag6 ENSDARG00000075892 3782 1.722 - 0.976 - - - - 0.746 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
28. akirin2 ENSDARG00000058729 13245 1.721 - 0.982 - - - - 0.739 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
29. gng5 ENSDARG00000039830 12102 1.718 - 0.919 - - - - 0.799 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
30. lman2lb ENSDARG00000088663 1641 1.716 - 0.987 - - - - 0.729 - - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
31. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.715 - 0.985 - - - - 0.730 - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
32. sh3glb1 sh3glb1 1335 1.715 - 0.974 - - - - 0.741 - -
33. CABZ01057907.1 CABZ01057907.1 1140 1.714 - 0.981 - - - - 0.733 - -
34. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.714 - 0.980 - - - - 0.734 - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
35. abcf1 ENSDARG00000031795 8635 1.713 - 0.875 - - - 0.838 - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
36. carhsp1 ENSDARG00000053129 2100 1.709 - 0.976 - - - 0.733 - - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
37. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.702 - 0.982 - - - 0.720 - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
38. nop16 ENSDARG00000044402 3645 1.702 - 0.973 - - - - - - 0.729 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
39. sart3 ENSDARG00000008032 2594 1.694 - 0.985 - - - - - - 0.709 squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
40. CABZ01103862.1 ENSDARG00000109235 3223 1.688 - 0.964 - - - - 0.724 - -
41. C9H2orf15 C9H2orf15 1975 1.685 - 0.984 - - - - 0.701 - -
42. srsf9 ENSDARG00000008097 2405 1.68 - - - - - - - 0.829 0.851 serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
43. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.67 0.705 0.965 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
44. sf1 ENSDARG00000008188 5142 1.667 - - - - - - 0.831 0.836 - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
45. wls ENSDARG00000009534 8719 1.663 - 0.935 0.728 - - - - - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
46. anp32e ENSDARG00000054804 11017 1.663 0.825 - - - - - 0.838 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
47. si:rp71-45k5.4 ENSDARG00000035679 10411 1.66 - 0.954 - - - 0.706 - - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
48. psmd8 ENSDARG00000020454 6645 1.659 - - - - - - 0.807 - 0.852 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
49. otub1b ENSDARG00000011462 4329 1.656 - - - - - 0.854 0.802 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
50. tet3 ENSDARG00000062646 6672 1.654 - - - - - - 0.804 0.850 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
51. ube4b ENSDARG00000037017 8012 1.653 - - - - - 0.828 0.825 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
52. eif3ea ENSDARG00000090697 14670 1.65 - 0.855 - - - - 0.795 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
53. syap1 ENSDARG00000012946 3560 1.642 - 0.937 - - - - 0.705 - - synapse associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-917]
54. caprin1b ENSDARG00000054272 7033 1.634 - - - - - - 0.833 - 0.801 cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
55. rhoad rhoad 8007 1.633 - 0.926 - - - 0.707 - - -
56. gna11b ENSDARG00000053326 5118 1.625 0.759 - - - - - 0.866 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
57. sf3b1 ENSDARG00000056138 5785 1.624 - - - - - - 0.808 - 0.816 splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
58. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.62 0.764 - - - - - 0.856 - - proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
59. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.618 - - - - - - 0.893 0.725 - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
60. vps25 ENSDARG00000059079 3747 1.612 - 0.818 - - - - 0.794 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
61. srsf4 ENSDARG00000105293 9657 1.612 0.743 - - - - - 0.869 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
62. tmem167a ENSDARG00000035914 3319 1.607 - - - - - 0.798 0.809 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
63. ugt1ab 545 1.603 - 0.883 - - - 0.720 - - - UDP glucuronosyltransferase 1 family a, b
64. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.6 0.739 - - - - - 0.861 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
65. kmt2cb ENSDARG00000075560 4816 1.599 - - - - - - 0.808 - 0.791 lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
66. nr2f2 ENSDARG00000040926 5213 1.589 - - - - - - 0.747 0.842 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
67. krcp ENSDARG00000040224 5961 1.587 - - - - - 0.814 - - 0.773 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
68. mllt10 ENSDARG00000045401 7557 1.586 0.776 - - - - - 0.810 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
69. smarcd1 ENSDARG00000019004 6028 1.585 - - - - - - 0.831 - 0.754 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
70. ptges3b ENSDARG00000089626 5666 1.583 - - - 0.803 - - 0.780 - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
71. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.579 0.776 - - - - - 0.803 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
72. tle2 5014 1.578 - - - - - - 0.759 0.819 - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
73. hyou1 ENSDARG00000013670 4172 1.577 - - - - - 0.785 - - 0.792 hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
74. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.576 - - - - - 0.798 0.778 - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
75. wu:fk48d07 wu:fk48d07 13245 1.574 - 0.833 - 0.741 - - - - -
76. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.569 - - - - - - 0.774 0.795 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
77. ppp2r1b ppp2r1b 3469 1.568 - - - - - - 0.795 - 0.773
78. cdk2ap2 ENSDARG00000103145 8024 1.567 - 0.820 - - - - 0.747 - - cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
79. hsbp1b ENSDARG00000041921 6170 1.566 - - - - - 0.805 0.761 - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
80. elof1 ENSDARG00000099453 6176 1.561 - - - - - - 0.707 0.854 - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
81. khsrp ENSDARG00000026489 15738 1.558 - - - - - - 0.758 0.800 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
82. znf292b ENSDARG00000043973 3791 1.555 - - - - - 0.763 - 0.792 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
83. zgc:174906 ENSDARG00000075314 2187 1.553 - - - - - - - 0.777 0.776 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
84. si:ch73-46j18.5 ENSDARG00000092467 6002 1.552 - - - - - - 0.838 - 0.714 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
85. derl1 ENSDARG00000021905 4698 1.552 - - - - - 0.712 0.840 - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
86. nr2f6b ENSDARG00000003165 5855 1.551 - - - - - 0.792 0.759 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
87. hes6 ENSDARG00000019335 4754 1.55 0.735 - - - - - - 0.815 - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
88. tmpob ENSDARG00000022978 8121 1.545 - - - - - - 0.735 0.810 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
89. ash2l ENSDARG00000060392 4916 1.544 - - - - - - 0.780 - 0.764 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
90. CCDC106 CCDC106 1908 1.543 - - - - - 0.714 0.829 - -
91. MKI67 ENSDARG00000091150 11038 1.541 0.723 - - - - - 0.818 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
92. usp7 ENSDARG00000073710 7017 1.54 0.744 - - - - - 0.796 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
93. smarcb1b ENSDARG00000011594 2413 1.538 - - - - - - 0.712 - 0.826 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
94. rbb4l ENSDARG00000015208 5542 1.536 - - 0.751 - - - 0.785 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
95. prpf4bb ENSDARG00000040310 2260 1.535 - - - - - - 0.767 0.768 - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
96. khdrbs1a ENSDARG00000052856 53666 1.533 0.778 - - - - - - 0.755 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
97. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.532 0.802 - - - - - - 0.730 - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
98. atf4b2 atf4b2 4734 1.532 - - - - - - 0.827 - 0.705
99. snrpe ENSDARG00000033175 7462 1.531 0.743 - - - - - 0.788 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
100. paf1 ENSDARG00000098432 1806 1.531 - - - - - 0.747 - - 0.784 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]

There are 1366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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