Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrpc

Gene Name Gene ID Reads Annotation
snrpc ENSDARG00000009871 9567 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]










Genes with expression patterns similar to snrpc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpc ENSDARG00000009871 9567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
2. wu:fc51f04 wu:fc51f04 7074 3.378 - - - 0.785 - 0.958 - 0.820 0.815
3. parp1 ENSDARG00000019529 6787 3.335 0.782 - - - - 0.970 - 0.714 0.869 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
4. ssbp4 ENSDARG00000056483 10196 3.296 - - - 0.782 0.857 - 0.896 0.761 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
5. rrm1 ENSDARG00000014017 7296 3.185 0.710 - - 0.812 - - 0.849 - 0.814 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
6. tma7 ENSDARG00000071670 13372 3.152 - 0.880 - 0.729 - - 0.783 - 0.760 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
7. sumo3a ENSDARG00000028119 13447 3.105 - - - 0.748 - - 0.796 0.701 0.860 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 2.745 - - 0.999 - - 0.985 0.761 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
9. wdr5 ENSDARG00000016903 4834 2.717 - 0.956 - - - 0.965 - - 0.796 WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
10. hmgb2b ENSDARG00000053990 11519 2.639 - - - - - 0.968 0.781 - 0.890 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
11. PSIP1 PSIP1 5252 2.617 - 0.948 - - - 0.967 0.702 - -
12. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 2.586 - - 0.976 0.752 - - - - 0.858 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
13. eif2s1a ENSDARG00000005827 5992 2.556 - - 0.997 - - - 0.765 - 0.794 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
14. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 2.531 - 0.937 - - - - 0.769 - 0.825 bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
15. snrpd3l ENSDARG00000076283 7655 2.53 - - - 0.807 - - 0.813 - 0.910 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
16. snrpe ENSDARG00000033175 7462 2.524 0.744 - - - 0.908 - 0.872 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
17. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.514 - - - - - - 0.808 0.828 0.878 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
18. nr2f1a ENSDARG00000052695 5037 2.509 - 0.931 - - - - - 0.786 0.792 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
19. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.505 - - - 0.794 - - 0.813 - 0.898 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
20. hnrnpub ENSDARG00000004735 16496 2.481 - - - 0.762 - - 0.806 - 0.913 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
21. snrpa ENSDARG00000018890 4593 2.463 - - - 0.702 0.934 - - - 0.827 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
22. dnajb12b ENSDARG00000087473 3811 2.456 - - - - - 0.979 0.753 - 0.724 DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
23. hdac1 ENSDARG00000015427 19804 2.446 0.714 0.864 - - - - - - 0.868 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. SNRPG ENSDARG00000099667 18697 2.445 - - - 0.757 - - 0.799 - 0.889 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
25. hn1b hn1b 7325 2.421 0.729 - 0.986 - - - 0.706 - -
26. puf60a ENSDARG00000032175 5618 2.417 - - - 0.721 - - 0.842 - 0.854 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
27. acvr1b acvr1b 2963 2.411 - - - - - - 0.758 0.814 0.839
28. elof1 ENSDARG00000099453 6176 2.409 0.827 - - 0.772 - - 0.810 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
29. hcfc1b ENSDARG00000012519 3633 2.403 - - - 0.743 0.912 - 0.748 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
30. h3f3a 66671 2.399 0.740 - - - - - 0.864 0.795 - H3 histone, family 3A, transcript variant X1
31. u2surp ENSDARG00000061490 2814 2.396 - 0.931 - 0.707 - - 0.758 - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
32. khsrp ENSDARG00000026489 15738 2.389 0.752 - - - - - 0.854 - 0.783 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
33. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 2.381 - 0.945 - - - - 0.708 - 0.728 chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
34. ilf2 ENSDARG00000014591 14543 2.377 0.764 - - 0.727 - - - - 0.886 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
35. hypk ENSDARG00000059725 20584 2.374 - - - - 0.791 0.852 0.731 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
36. smek1 ENSDARG00000042187 3509 2.371 - - - - 0.906 - 0.726 - 0.739 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
37. cdk2 ENSDARG00000026577 2835 2.359 - - - - - - 0.805 0.741 0.813 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
38. pfn2l ENSDARG00000012682 21690 2.355 0.710 - - - 0.828 - 0.817 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
39. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.349 0.741 - - - - - 0.804 - 0.804 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
40. kdm1a ENSDARG00000060679 6152 2.348 0.742 - - 0.776 - - 0.830 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
41. TAF15 ENSDARG00000070019 5102 2.341 - - - - - - 0.713 0.764 0.864 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
42. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 2.334 0.818 - - - - - 0.742 - 0.774 ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
43. u2af1 ENSDARG00000015325 3217 2.329 0.715 - - - - - - 0.745 0.869 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
44. sdha ENSDARG00000016721 8255 2.324 0.717 - - - 0.844 - 0.763 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
45. marcksa ENSDARG00000004049 2518 2.321 - - - - - - 0.711 0.730 0.880 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
46. top1l ENSDARG00000070545 40529 2.31 - - - 0.762 - 0.775 0.773 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
47. stmn1a ENSDARG00000004169 21169 2.303 0.760 - - - - - 0.775 - 0.768 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
48. mta2 ENSDARG00000013031 2932 2.303 - - - - - - 0.820 0.774 0.709 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
49. hmgb3a ENSDARG00000056725 15668 2.301 0.710 - - - - - 0.790 - 0.801 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
50. meaf6 ENSDARG00000101216 6865 2.289 - - - 0.744 - - 0.765 0.780 - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
51. h2afva ENSDARG00000068820 16427 2.268 - - - 0.726 - - 0.824 0.718 - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
52. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 2.251 - - - 0.754 - - 0.753 - 0.744 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
53. apex1 ENSDARG00000045843 6345 2.25 0.761 - - 0.738 - - 0.751 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
54. ptbp2b ENSDARG00000015901 2458 2.246 - - - - - - 0.703 0.740 0.803 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
55. ahctf1 ENSDARG00000077530 2315 2.242 - - - 0.712 - - 0.745 - 0.785 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
56. snrpf ENSDARG00000105037 10241 2.237 0.713 - - 0.806 - - 0.718 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
57. RLTPR 1158 2.235 - - - - - - 0.710 0.728 0.797 RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
58. smarcd1 ENSDARG00000019004 6028 2.23 - - - 0.775 - - 0.720 - 0.735 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
59. kpnb3 ENSDARG00000040245 7967 2.216 - - - 0.705 0.750 - 0.761 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
60. fam60al 2846 2.199 - - - 0.728 - - 0.713 - 0.758 family with sequence similarity 60, member A, like
61. chd7 ENSDARG00000075211 12085 2.193 0.732 - - 0.733 - - 0.728 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
62. fam57ba ENSDARG00000026875 504 2.175 0.730 - - - - - - 0.709 0.736 family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
63. arnt2 ENSDARG00000103697 5731 2.152 0.701 - - - - - 0.709 - 0.742 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
64. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.935 - - 0.965 - - 0.970 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
65. rgs12b ENSDARG00000036774 5088 1.922 - 0.923 0.999 - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
66. BRCC3 ENSDARG00000098242 1123 1.885 - 0.915 - - - 0.970 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
67. si:ch211-160e1.5 5586 1.882 - 0.926 - - - 0.956 - - - si:ch211-160e1.5
68. pdlim5b ENSDARG00000027600 4252 1.875 - 0.913 - - - 0.962 - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
69. arglu1a ENSDARG00000019223 8716 1.875 - - 0.999 - 0.876 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
70. spata13 ENSDARG00000062837 5330 1.865 - - 0.996 - 0.869 - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
71. map1lc3b ENSDARG00000101127 3958 1.851 - 0.951 - - - - 0.900 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
72. padi2 ENSDARG00000044167 6765 1.844 - 0.944 - - - 0.900 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
73. unc45b ENSDARG00000008433 8298 1.827 - 0.830 0.997 - - - - - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
74. hnrpdl 14288 1.82 - 0.861 - - - 0.959 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
75. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.805 - - 0.996 - - - - - 0.809 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
76. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.791 - 0.944 - - - - - - 0.847 nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
77. anp32b ENSDARG00000023330 25013 1.788 - 0.798 0.990 - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
78. aldoaa ENSDARG00000011665 56184 1.783 - 0.793 0.990 - - - - - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
79. krcp ENSDARG00000040224 5961 1.776 - - 0.999 0.777 - - - - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
80. evpla ENSDARG00000019808 7565 1.773 - - - - 0.813 0.960 - - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
81. vps35 ENSDARG00000008224 13245 1.768 - - 0.998 - - - 0.770 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
82. rbfox2 ENSDARG00000052182 6621 1.764 0.787 - - - - 0.977 - - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
83. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.756 - - 0.999 - - - 0.757 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
84. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.755 - - - - - 0.972 0.783 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
85. tcf7l1a ENSDARG00000038159 2288 1.749 - - - - - 0.967 0.782 - - transcription factor 7 like 1a [Source:ZFIN;Acc:ZDB-GENE-980605-30]
86. SV2A ENSDARG00000059945 1278 1.747 - - - - - 0.988 - - 0.759 synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
87. rtf1 ENSDARG00000008947 6596 1.737 - 0.952 - - - - - - 0.785 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
88. phb ENSDARG00000057414 9551 1.737 - - - - 0.802 0.935 - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
89. plagx ENSDARG00000036855 3768 1.737 - - - - - 0.988 0.749 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
90. ndufa11 ENSDARG00000042777 2757 1.727 - - - - - 0.958 0.769 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
91. sf3b4 ENSDARG00000018574 7470 1.727 - - - 0.757 - 0.970 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
92. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.724 - - - - 0.918 - 0.806 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
93. usp9 ENSDARG00000013708 9057 1.724 - - 0.997 - - - 0.727 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
94. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.724 - - - - - 0.944 - - 0.780 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
95. parn ENSDARG00000102634 2049 1.722 - - - - - 0.972 - - 0.750 poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
96. srsf6a ENSDARG00000013729 8576 1.72 - - - - 0.920 - 0.800 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
97. psmd14 ENSDARG00000063100 15711 1.72 0.777 0.943 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
98. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.72 - - - - 0.902 - 0.818 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
99. col1a2 ENSDARG00000020007 36228 1.719 - 0.947 - - - 0.772 - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
100. sox9b ENSDARG00000043923 5375 1.712 - - - - 0.887 - - - 0.825 SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]

There are 1643 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA