Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrpb2

Gene Name Gene ID Reads Annotation
snrpb2 ENSDARG00000039424 1597 small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]










Genes with expression patterns similar to snrpb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpb2 ENSDARG00000039424 1597 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
2. ccnt1 ENSDARG00000017525 1888 1.647 - 0.881 - - - - 0.766 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
3. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.585 - 0.853 0.732 - - - - - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
4. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.572 - 0.862 - - - - - - 0.710 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
5. PLEKHG1 2100 1.551 - - - - - 0.807 0.744 - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
6. cdk5 ENSDARG00000056683 1998 1.546 - 0.798 - - - - - 0.748 - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
7. mgaa ENSDARG00000078784 1344 1.534 - 0.754 - - - 0.780 - - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
8. rwdd3 ENSDARG00000057315 289 1.533 - 0.731 - - - 0.802 - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
9. slbp ENSDARG00000100558 3405 1.523 - - - 0.733 - - 0.790 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
10. gpatch2 1221 1.515 - 0.781 - - - - - 0.734 - G patch domain containing 2, transcript variant X1
11. polr2d ENSDARG00000076509 3386 1.508 - - - 0.786 - - - - 0.722 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
12. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.478 - - 0.771 - - - - - 0.707 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
13. ccdc127b ENSDARG00000008946 141 1.476 - 0.765 - - - - 0.711 - - coiled-coil domain containing 127b [Source:ZFIN;Acc:ZDB-GENE-060503-656]
14. gpx8 ENSDARG00000013302 1427 1.476 - 0.723 - - - 0.753 - - - glutathione peroxidase 8 (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-965]
15. cdk2ap2 ENSDARG00000103145 8024 1.473 - - - - - - 0.771 - 0.702 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
16. kpna1 ENSDARG00000016360 1275 1.469 - 0.704 - - - 0.765 - - - karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
17. ilf2 ENSDARG00000014591 14543 1.469 - - 0.757 - - - - - 0.712 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
18. nck1b ENSDARG00000075369 1596 1.459 - 0.753 - - - - 0.706 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
19. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.45 0.742 0.708 - - - - - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
20. rbm4.1 ENSDARG00000036386 625 1.443 - 0.737 - - - - - - 0.706 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
21. CABZ01080568.2 CABZ01080568.2 2137 1.437 0.720 0.717 - - - - - - -
22. rbpjb ENSDARG00000052091 3122 1.435 - 0.711 - - - - - 0.724 - recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
23. gadd45aa ENSDARG00000043581 114 1.417 - 0.700 - - - - 0.717 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
24. tceb1a 969 0.907 - 0.907 - - - - - - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
25. pigq ENSDARG00000038097 486 0.904 - 0.904 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
26. kdm2aa ENSDARG00000059653 2389 0.903 - 0.903 - - - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
27. C3H19orf43 C3H19orf43 2961 0.897 - 0.897 - - - - - - -
28. cnot6 cnot6 7029 0.89 - - - - - - 0.890 - -
29. tfpia ENSDARG00000034718 1257 0.888 - 0.888 - - - - - - - tissue factor pathway inhibitor a [Source:ZFIN;Acc:ZDB-GENE-030711-1]
30. mhc1zba ENSDARG00000036588 761 0.884 - 0.884 - - - - - - - major histocompatibility complex class I ZBA [Source:ZFIN;Acc:ZDB-GENE-040426-2149]
31. senp3b ENSDARG00000056741 1296 0.883 - 0.883 - - - - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
32. xpo1a ENSDARG00000078041 3544 0.876 - 0.876 - - - - - - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
33. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.875 - 0.875 - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
34. micall1 micall1 720 0.874 - 0.874 - - - - - - -
35. cnep1r1 ENSDARG00000036064 1440 0.873 - 0.873 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
36. si:ch73-21k16.6 si:ch73-21k16.6 4896 0.871 - 0.871 - - - - - - -
37. spcs2 ENSDARG00000042823 10032 0.87 - - - - - - 0.870 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
38. SLC10A7 ENSDARG00000104508 996 0.87 - 0.870 - - - - - - - solute carrier family 10, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-5]
39. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.869 - 0.869 - - - - - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
40. chka ENSDARG00000041078, ENSDARG00000115973 468 0.868 - 0.868 - - - - - - - choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
41. tuft1b ENSDARG00000071010 909 0.866 - - - - - - 0.866 - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
42. MIB1 ENSDARG00000102184 3285 0.866 - 0.866 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
43. polr1d ENSDARG00000037570 860 0.864 - 0.864 - - - - - - - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
44. ccdc174 ENSDARG00000023858 432 0.864 - 0.864 - - - - - - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
45. mrps23 ENSDARG00000033973 2265 0.861 - 0.861 - - - - - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
46. anapc7 ENSDARG00000063005 1139 0.86 - 0.860 - - - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
47. BCKDHB ENSDARG00000014676 3725 0.86 - 0.860 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
48. stk11 ENSDARG00000046074 506 0.86 - - - - - 0.860 - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
49. rreb1b ENSDARG00000042652 2731 0.859 - 0.859 - - - - - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
50. srebf2 ENSDARG00000063438 1982 0.859 - 0.859 - - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
51. mafba ENSDARG00000017121 1215 0.859 - 0.859 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
52. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.857 - - - - - - - 0.857 - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
53. tmem11 ENSDARG00000070866 1319 0.857 - 0.857 - - - - - - - transmembrane protein 11 [Source:ZFIN;Acc:ZDB-GENE-050417-37]
54. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 0.857 - - - - - - 0.857 - - exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
55. prpf6 ENSDARG00000091367 1868 0.856 - - - - - - 0.856 - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
56. caln2 ENSDARG00000069766 290 0.855 - 0.855 - - - - - - - calneuron 2 [Source:ZFIN;Acc:ZDB-GENE-091204-251]
57. CABZ01078889.1 CABZ01078889.1 911 0.855 - 0.855 - - - - - - -
58. rtca ENSDARG00000002215 3558 0.854 - 0.854 - - - - - - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
59. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 0.854 - - - - - - 0.854 - - TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
60. creb3l2 ENSDARG00000063563 1284 0.853 - 0.853 - - - - - - - cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
61. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 0.852 - - - - - - 0.852 - - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
62. haus1 ENSDARG00000058968 1336 0.849 - - - - - - 0.849 - - HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
63. yy1a ENSDARG00000042796 4982 0.848 - 0.848 - - - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
64. C25H12orf73 C25H12orf73 2031 0.846 - 0.846 - - - - - - -
65. bmp5 ENSDARG00000101701 517 0.846 - 0.846 - - - - - - - bone morphogenetic protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1413]
66. mir124-2 196 0.846 - - - - - - - 0.846 - microRNA 124-2
67. tpm1 ENSDARG00000087402 1666 0.845 - 0.845 - - - - - - - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
68. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.844 - 0.844 - - - - - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
69. vps72 1164 0.844 - 0.844 - - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
70. MCM8 ENSDARG00000074326 128 0.843 - 0.843 - - - - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-120927-1]
71. casc3 ENSDARG00000029911 1174 0.841 - - - - - - 0.841 - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
72. mterfd3 mterfd3 1004 0.84 - 0.840 - - - - - - -
73. galnt1 ENSDARG00000061335 1648 0.84 - - - - - - 0.840 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
74. ptprfa ENSDARG00000103479 1250 0.837 - - - - - - 0.837 - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
75. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 0.837 - - - - - - 0.837 - - BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
76. hbae1 14666 0.836 - 0.836 - - - - - - - hemoglobin, alpha embryonic 1
77. cpsf3l 870 0.835 - 0.835 - - - - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X1
78. rbpms2b ENSDARG00000079578 436 0.832 - 0.832 - - - - - - - RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
79. ttc39c ENSDARG00000102308, ENSDARG00000115554 748 0.832 - 0.832 - - - - - - - tetratricopeptide repeat domain 39C [Source:ZFIN;Acc:ZDB-GENE-050522-194]
80. tada2b ENSDARG00000003769 507 0.832 - - - - - - 0.832 - - transcriptional adaptor 2B [Source:ZFIN;Acc:ZDB-GENE-050522-557]
81. glmna ENSDARG00000058267 597 0.83 - - - - - - 0.830 - - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
82. echdc2 ENSDARG00000016607 719 0.829 - 0.829 - - - - - - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
83. adrb2a ENSDARG00000088124 324 0.829 - 0.829 - - - - - - - adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3]
84. tmem59l ENSDARG00000003655 1536 0.829 - 0.829 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
85. sh3kbp1 ENSDARG00000075853 2838 0.829 - 0.829 - - - - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
86. kiaa0907 1674 0.828 - 0.828 - - - - - - - KIAA0907 protein, transcript variant X7
87. egln1 egln1 3746 0.828 - 0.828 - - - - - - -
88. sgut1 3470 0.826 - - - - - - 0.826 - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
89. clasp1a ENSDARG00000010280 1158 0.825 - - - - - - 0.825 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
90. nmt1a ENSDARG00000052966 5918 0.824 - 0.824 - - - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
91. wdr62 ENSDARG00000060312 554 0.824 - - - - - - - 0.824 - WD repeat domain 62 [Source:ZFIN;Acc:ZDB-GENE-060503-291]
92. crfb6 1137 0.822 - - - - - - - 0.822 - cytokine receptor family member b6
93. nr1d2b ENSDARG00000009594 1144 0.821 - - - - - - 0.821 - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
94. prom2 ENSDARG00000039406 278 0.821 - - - - - - 0.821 - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
95. rbm8a ENSDARG00000016516 8789 0.82 - - - - - - 0.820 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
96. rgs17 ENSDARG00000039435 590 0.82 - 0.820 - - - - - - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
97. ENSDARG00000086666 ENSDARG00000086666 2159 0.819 - 0.819 - - - - - - -
98. atpaf1 ENSDARG00000042799 1309 0.819 - - - - - - 0.819 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
99. zgc:101040 ENSDARG00000005176 369 0.819 - 0.819 - - - - - - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
100. fam174b ENSDARG00000068709 1171 0.817 - 0.817 - - - - - - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]

There are 697 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA