Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snrpa1

Gene Name Gene ID Reads Annotation
snrpa1 ENSDARG00000024651 3306 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]










Genes with expression patterns similar to snrpa1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpa1 ENSDARG00000024651 3306 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
2. sdad1 ENSDARG00000105117 2819 1.992 - 0.995 0.997 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
3. ing2 ENSDARG00000104907 1336 1.954 - 0.997 - - - - - - 0.957 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
4. psmc2 ENSDARG00000020101 8095 1.949 - 0.958 0.991 - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
5. hars ENSDARG00000003693 7217 1.938 - 0.955 0.983 - - - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
6. nme3 ENSDARG00000100990 3889 1.926 - 0.993 - - - - - - 0.933 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
7. CPAMD8 ENSDARG00000056530 3481 1.908 - - 0.998 - - - - - 0.910 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
8. cstf3 ENSDARG00000018904 6111 1.893 - 0.997 - - - - - - 0.896 cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
9. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.874 - 0.996 - - - - - - 0.878 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
10. sort1b ENSDARG00000056252 2652 1.868 - 0.991 - - - - - - 0.877 sortilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7447]
11. snrpf ENSDARG00000105037 10241 1.825 - - 0.980 - - 0.845 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
12. C20H12orf57 C20H12orf57 3325 1.76 - 0.996 - - - 0.764 - - -
13. bc2 5213 1.751 - - 0.996 - - - - - 0.755 putative breast adenocarcinoma marker
14. myh10 ENSDARG00000000103 7522 1.736 - 0.994 - - - 0.742 - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
15. srsf5b ENSDARG00000027734 6996 1.735 - 0.995 - - - 0.740 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
16. gstm gstm 4064 1.718 - - - - - - - 0.820 0.898
17. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.718 - 0.994 - 0.724 - - - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
18. cdca7a ENSDARG00000077620 9345 1.715 - - 0.983 - - - - - 0.732 cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
19. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 1.703 - 0.996 - - - 0.707 - - - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
20. PEG3_5 PEG3_5 1624 1.688 - - - 0.746 - - - - 0.942
21. usp9 ENSDARG00000013708 9057 1.688 - 0.984 - - - 0.704 - - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
22. ANKRD50 ENSDARG00000045666 1756 1.663 - - - - - 0.712 - - 0.951 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
23. yy1b ENSDARG00000027978 2669 1.66 - 0.706 - - - - - - 0.954 YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
24. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.652 - 0.816 0.836 - - - - - -
25. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.643 - - - - - - 0.736 - 0.907 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
26. ptpn1 ENSDARG00000007923 3647 1.629 0.753 - - - - - - - 0.876 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
27. sarnp ENSDARG00000059357 4768 1.61 - - - - - 0.748 - 0.862 - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
28. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.601 - 0.827 - 0.774 - - - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
29. znf292b ENSDARG00000043973 3791 1.544 - - - 0.784 - 0.760 - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
30. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.536 - - - - - - 0.711 0.825 - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
31. tmed4 ENSDARG00000024954 3476 1.521 - - - - - - - 0.773 0.748 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
32. sub1a ENSDARG00000053446 13383 1.52 0.716 0.804 - - - - - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
33. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.518 - - - - - 0.795 0.723 - - chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
34. eif4a3 ENSDARG00000102978 16162 1.508 - - - 0.730 - 0.778 - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
35. tmem167a ENSDARG00000035914 3319 1.501 - - - - - 0.710 - - 0.791 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
36. sf3b2 ENSDARG00000018049 4675 1.481 - - - - - 0.711 - - 0.770 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
37. nr2f2 ENSDARG00000040926 5213 1.48 - - - - 0.703 - 0.777 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
38. crabp1b ENSDARG00000035904 2753 1.475 - - - - - 0.728 0.747 - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
39. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.456 - - - 0.719 - - 0.737 - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
40. apex1 ENSDARG00000045843 6345 1.439 - - - 0.711 - - - 0.728 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
41. sgut1 3470 0.999 - 0.999 - - - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
42. C13H10orf11 1209 0.998 - - 0.998 - - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
43. CR381676.2 CR381676.2 1591 0.998 - 0.998 - - - - - - -
44. CT485993.2 CT485993.2 1419 0.998 - - 0.998 - - - - - -
45. mknk2b ENSDARG00000015164 2158 0.998 - - 0.998 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
46. igf2bp2a ENSDARG00000003421 2810 0.998 - - 0.998 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
47. prkag3b ENSDARG00000000369 1945 0.998 - - 0.998 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
48. CU695232.1 ENSDARG00000098286 1266 0.998 - - 0.998 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
49. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.998 - - 0.998 - - - - - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
50. btbd2 btbd2 1296 0.998 - - 0.998 - - - - - -
51. tbcela ENSDARG00000002682 1179 0.998 - - 0.998 - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
52. mtor ENSDARG00000053196 2156 0.998 - - 0.998 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
53. sh3bp4a ENSDARG00000020000 1049 0.997 - 0.997 - - - - - - - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
54. dnajc3 dnajc3 802 0.997 - 0.997 - - - - - - -
55. tuba1c ENSDARG00000055216 8384 0.997 - 0.997 - - - - - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
56. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.997 - 0.997 - - - - - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
57. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 0.997 - 0.997 - - - - - - - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
58. cep44 ENSDARG00000053106 683 0.997 - 0.997 - - - - - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
59. CR387996.1 ENSDARG00000097774 3037 0.997 - 0.997 - - - - - - -
60. ddah2 ENSDARG00000105009 4570 0.997 - - 0.997 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
61. si:ch211-152p11.4 ENSDARG00000079705 2341 0.997 - - 0.997 - - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
62. tdh ENSDARG00000002745 5344 0.997 - 0.997 - - - - - - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
63. tmem209 ENSDARG00000039340 1598 0.997 - 0.997 - - - - - - - transmembrane protein 209 [Source:ZFIN;Acc:ZDB-GENE-030131-2879]
64. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 0.997 - 0.997 - - - - - - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
65. samd1a ENSDARG00000102810 1037 0.997 - 0.997 - - - - - - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
66. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.997 - 0.997 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
67. slc38a10 ENSDARG00000077081 1691 0.997 - 0.997 - - - - - - - solute carrier family 38, member 10 [Source:ZFIN;Acc:ZDB-GENE-050309-21]
68. socs6b ENSDARG00000015863 1799 0.997 - 0.997 - - - - - - - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
69. mcfd2 ENSDARG00000039757, ENSDARG00000109631, ENSDARG00000116502 1804 0.997 - 0.997 - - - - - - - multiple coagulation factor deficiency 2 [Source:ZFIN;Acc:ZDB-GENE-041010-8]
70. foxo1b ENSDARG00000061549 790 0.997 - 0.997 - - - - - - - forkhead box O1 b [Source:ZFIN;Acc:ZDB-GENE-080425-3]
71. abl1 ENSDARG00000035187 3553 0.997 - 0.997 - - - - - - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
72. nr5a2 ENSDARG00000100940 1488 0.997 - 0.997 - - - - - - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
73. dusp11 ENSDARG00000038156 2490 0.997 - - 0.997 - - - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
74. ITFG3 ITFG3 1803 0.997 - - 0.997 - - - - - -
75. rpl3 ENSDARG00000003599 797 0.997 - 0.997 - - - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
76. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 0.997 - - 0.997 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
77. mrpl13 ENSDARG00000056903 2768 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
78. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 0.997 - 0.997 - - - - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
79. vapal ENSDARG00000115862 3108 0.997 - - 0.997 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
80. mao ENSDARG00000023712 1448 0.997 - 0.997 - - - - - - - monoamine oxidase [Source:ZFIN;Acc:ZDB-GENE-040329-3]
81. psmd11a ENSDARG00000060150 4529 0.997 - - 0.997 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
82. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.997 - 0.997 - - - - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
83. cped1 ENSDARG00000045747 1024 0.997 - 0.997 - - - - - - - cadherin-like and PC-esterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-247]
84. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 0.997 - 0.997 - - - - - - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
85. pgam5 ENSDARG00000035608 4044 0.996 - 0.996 - - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
86. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.996 - 0.996 - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
87. pdxkb ENSDARG00000036546 721 0.996 - 0.996 - - - - - - - pyridoxal (pyridoxine, vitamin B6) kinase b [Source:ZFIN;Acc:ZDB-GENE-030616-521]
88. FP102892.2 FP102892.2 809 0.996 - 0.996 - - - - - - -
89. KLB ENSDARG00000076294 595 0.996 - 0.996 - - - - - - - klotho beta [Source:ZFIN;Acc:ZDB-GENE-110909-4]
90. cux1a ENSDARG00000078459 3914 0.996 - 0.996 - - - - - - - cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
91. AKAP2 AKAP2 4178 0.996 - - 0.996 - - - - - -
92. utp23 ENSDARG00000105012 1346 0.996 - 0.996 - - - - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
93. arnt2 ENSDARG00000103697 5731 0.996 - 0.996 - - - - - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
94. LIMA1 LIMA1 908 0.996 - 0.996 - - - - - - -
95. ccdc25 ENSDARG00000021753 3837 0.996 - - 0.996 - - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
96. abracl ENSDARG00000042876 10208 0.996 - - 0.996 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
97. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 0.995 - - 0.995 - - - - - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
98. lum ENSDARG00000045580 5395 0.995 - 0.995 - - - - - - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
99. hat1 ENSDARG00000034916 5712 0.995 - - 0.995 - - - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
100. mrpl54 ENSDARG00000071468 2715 0.995 - 0.995 - - - - - - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]

There are 790 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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