Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrpa

Gene Name Gene ID Reads Annotation
snrpa ENSDARG00000018890 4593 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]










Genes with expression patterns similar to snrpa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrpa ENSDARG00000018890 4593 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
2. ssbp4 ENSDARG00000056483 10196 3.133 - - - 0.709 0.834 0.776 - 0.814 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
3. ilf2 ENSDARG00000014591 14543 2.975 - - 0.740 0.704 - - - 0.720 0.811 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
4. snrpc ENSDARG00000009871 9567 2.463 - - - 0.702 0.934 - - - 0.827 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
5. creb1a ENSDARG00000053586 5068 2.459 - - - - - 0.775 0.849 - 0.835 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
6. rnd3a ENSDARG00000076799 4705 2.457 - 0.732 - - 0.940 0.785 - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
7. tcea1 ENSDARG00000003531 2912 2.455 - - - - - 0.753 - 0.836 0.866 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
8. KIF4A KIF4A 3322 2.434 0.777 0.717 - - 0.940 - - - -
9. kif11 ENSDARG00000010948 4973 2.381 - 0.871 - - - 0.743 - - 0.767 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
10. znf319 znf319 3027 2.368 - - - - - 0.750 0.854 - 0.764
11. akirin2 ENSDARG00000058729 13245 2.341 - - - 0.720 - - 0.791 0.830 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
12. scocb ENSDARG00000002217 1844 2.319 - 0.867 - - - - - 0.746 0.706 short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
13. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.302 - - - 0.763 - 0.712 - - 0.827 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
14. tead1a ENSDARG00000028159 3574 2.293 0.793 - - - - 0.749 0.751 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
15. nfya ENSDARG00000042004, ENSDARG00000114231 6606 2.258 - 0.814 0.719 - - 0.725 - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
16. atp6v0cb ENSDARG00000036577 3472 2.243 - 0.797 - - - 0.706 - - 0.740 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
17. arnt2 ENSDARG00000103697 5731 2.229 - - - - - 0.755 - 0.727 0.747 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
18. si:dkey-28b4.8 ENSDARG00000002840 1277 2.223 - 0.782 - - - 0.720 - - 0.721 si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
19. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.209 - 0.758 - - - 0.738 - - 0.713 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
20. ubap2 ubap2 4167 2.184 - 0.752 - - - - - 0.723 0.709
21. fam60al 2846 2.174 - - - 0.713 - - - 0.749 0.712 family with sequence similarity 60, member A, like
22. smek1 ENSDARG00000042187 3509 1.731 - - - - 0.927 - - - 0.804 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
23. E2F6 E2F6 1271 1.731 - - - - 0.959 - 0.772 - -
24. sox9b ENSDARG00000043923 5375 1.719 - - - - 0.929 - - - 0.790 SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
25. lsm4 ENSDARG00000023852 6083 1.701 - - - - 0.964 - - - 0.737 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
26. AP2A1 ENSDARG00000054320 5591 1.698 - 0.769 - - 0.929 - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
27. WDR61 ENSDARG00000007755 2827 1.694 - 0.765 - - 0.929 - - - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
28. aip ENSDARG00000104437 3574 1.693 - - - - 0.952 - - - 0.741 aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
29. cltcb ENSDARG00000090716 5544 1.69 - - - - 0.923 - 0.767 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
30. arglu1a ENSDARG00000019223 8716 1.683 - 0.790 - - 0.893 - - - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
31. ppp4r2b ENSDARG00000053447 2506 1.67 - - - 0.705 0.965 - - - - protein phosphatase 4, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3008]
32. snrpe ENSDARG00000033175 7462 1.667 - - - - 0.938 - - 0.729 - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
33. CCDC71 CCDC71 2442 1.665 - - - - 0.916 0.749 - - -
34. pbx1a ENSDARG00000100494 854 1.663 - - - - 0.931 - - - 0.732 pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
35. ifrd1 ENSDARG00000068708 2858 1.661 - - - - 0.937 - - 0.724 - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
36. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.658 - - - - 0.946 - - - 0.712 frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
37. emc1 ENSDARG00000057255 3582 1.658 - - - - 0.913 0.745 - - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
38. arl14ep ENSDARG00000001210 3029 1.654 - 0.716 - - 0.938 - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
39. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.647 - - - - 0.933 - - - 0.714 akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
40. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.639 - - - - 0.939 - - - 0.700 SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
41. FRG1 ENSDARG00000056504 1196 1.629 - 0.716 - - - - 0.913 - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
42. tma7 ENSDARG00000071670 13372 1.627 - - - - - - - 0.845 0.782 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
43. snrpd3l ENSDARG00000076283 7655 1.626 - - - 0.809 - - - - 0.817 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
44. nfyba ENSDARG00000039185 1804 1.624 - - - - 0.910 - - 0.714 - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
45. rtca ENSDARG00000002215 3558 1.62 - - - - - 0.751 - - 0.869 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
46. sumo3a ENSDARG00000028119 13447 1.611 - - - - - 0.787 - - 0.824 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
47. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.61 - - - - - - 0.713 - 0.897 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
48. timm10 ENSDARG00000069116 4459 1.605 - - - - 0.902 - 0.703 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
49. ddx39ab ENSDARG00000015111 11619 1.599 - - - - - 0.810 - - 0.789 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
50. fkbp3 ENSDARG00000098059 5428 1.599 - - - - 0.889 - - - 0.710 FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
51. nucks1a ENSDARG00000078473 28285 1.595 - - - - - 0.847 - 0.748 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
52. ddx19 ENSDARG00000005699 4602 1.593 - - - - - 0.836 - - 0.757 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
53. marcksa ENSDARG00000004049 2518 1.593 - - - - - - - 0.733 0.860 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
54. mapre1b ENSDARG00000002659 9119 1.591 - - - - - - - 0.747 0.844 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
55. top2a ENSDARG00000024488 4273 1.586 - - - - - 0.752 - - 0.834 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
56. prpsap2 ENSDARG00000019326 1463 1.582 - - - - - - - 0.713 0.869 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
57. tmem35 ENSDARG00000052567 5685 1.582 - - - - - 0.727 - - 0.855 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
58. khsrp ENSDARG00000026489 15738 1.581 - - - - - 0.795 - - 0.786 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
59. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.576 - - - - - 0.772 - - 0.804 activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
60. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.571 - - 0.729 - - - - - 0.842 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
61. dnaja2l ENSDARG00000010745 2367 1.571 - - - 0.731 - - - - 0.840 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
62. MAP4K4 ENSDARG00000098670 4665 1.57 - - - - - 0.746 - - 0.824 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
63. hmgb3a ENSDARG00000056725 15668 1.569 - - - - - 0.786 - - 0.783 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
64. pl10 pl10 10795 1.565 - - - - 0.797 0.768 - - -
65. hdac1 ENSDARG00000015427 19804 1.565 - - - - - 0.787 - - 0.778 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
66. nucks1b ENSDARG00000012777 4468 1.562 - - - - - 0.808 0.754 - - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
67. uck2a ENSDARG00000006074 1554 1.562 - - - - - - - 0.765 0.797 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
68. tmem147 ENSDARG00000039913 3209 1.56 - 0.739 - - - 0.821 - - - transmembrane protein 147 [Source:ZFIN;Acc:ZDB-GENE-040718-187]
69. kdm6bb ENSDARG00000056929 4807 1.558 - - - - - - 0.799 - 0.759 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
70. h2afx ENSDARG00000029406 2116 1.558 0.721 0.837 - - - - - - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
71. ipo7 ENSDARG00000035751 7095 1.557 - - - - 0.809 - - - 0.748 importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
72. uba1 ENSDARG00000037559 11579 1.556 - - - 0.734 - 0.822 - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
73. dpp3 ENSDARG00000020676 2393 1.552 - 0.769 - - - - 0.783 - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
74. bcl11ab ENSDARG00000063153 3032 1.552 - - - 0.702 - - - - 0.850 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
75. SCAF8 1618 1.552 - 0.811 - - - - - - 0.741 SR-related CTD-associated factor 8, transcript variant X3
76. srgap2a srgap2a 7197 1.551 - - - - 0.753 - 0.798 - -
77. arhgef2 ENSDARG00000075819 2173 1.548 - 0.747 - - - - - - 0.801 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
78. smarca5 ENSDARG00000052348 15433 1.545 - - - - - 0.739 - - 0.806 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
79. pcdh19 ENSDARG00000034344 2378 1.545 - - - - - 0.703 - - 0.842 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
80. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.544 - - - - - - - 0.738 0.806 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
81. hnrpl 6412 1.544 - - - - - 0.756 - - 0.788 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
82. skp1 ENSDARG00000003151 8172 1.543 - - - - - 0.806 - - 0.737 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
83. ube2d1b ENSDARG00000038576 5971 1.541 - - - - - - - 0.750 0.791 ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
84. arid1aa ENSDARG00000101710 3644 1.541 - - - - - 0.744 - - 0.797 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
85. rbmx ENSDARG00000014244 3445 1.54 - 0.753 - - - - - - 0.787 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
86. rbm25 rbm25 3629 1.539 - - - - - 0.742 - - 0.797
87. rreb1b ENSDARG00000042652 2731 1.538 - 0.835 - - - - 0.703 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
88. bri3bp ENSDARG00000010108 6295 1.538 - - - - - 0.836 - - 0.702 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
89. thoc7 ENSDARG00000015394 3824 1.537 - 0.831 - - - 0.706 - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
90. mllt11 ENSDARG00000071026 2518 1.537 - - - - - - - 0.729 0.808 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
91. bud31 ENSDARG00000017084 3892 1.536 - - - - - - - 0.756 0.780 BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
92. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.536 - - - - 0.720 - - - 0.816 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
93. ilf3b ENSDARG00000105177 9473 1.536 - - - 0.750 - - - 0.786 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
94. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.535 - - - - - 0.744 - - 0.791 KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
95. zgc:112425 zgc:112425 293873 1.533 - - - - - 0.728 - 0.805 -
96. pou3f3a ENSDARG00000042032 2835 1.529 - - - - - 0.752 - - 0.777 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
97. smc1al ENSDARG00000058203 8838 1.529 - - - - - 0.727 - - 0.802 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
98. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 1.528 - - - - - - - 0.799 0.729 serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
99. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.524 - - - - - 0.770 0.754 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
100. kpnb1 ENSDARG00000104889 9282 1.523 - - - 0.701 - - - - 0.822 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]

There are 1287 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA