Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrnp48

Gene Name Gene ID Reads Annotation
snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]










Genes with expression patterns similar to snrnp48

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
2. mvk ENSDARG00000004130 105 1.784 0.867 0.917 - - - - - - - mevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-041114-37]
3. zgc:113426 ENSDARG00000051793 37 1.752 0.836 0.916 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
4. CT583679.2 CT583679.2 10 1.71 0.794 0.916 - - - - - - -
5. gfi1aa ENSDARG00000020746 30 1.681 0.801 0.880 - - - - - - - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
6. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.638 - 0.916 - - - - - 0.722 - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
7. TGM1 ENSDARG00000017799 3 1.625 - 0.916 - - - - - 0.709 - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
8. rxrga ENSDARG00000005593 342 1.592 0.794 - - - - - 0.798 - - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
9. snrnp35 ENSDARG00000099913 21 1.59 0.794 0.796 - - - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-050706-77]
10. mir92b 95 1.583 0.784 - - - - 0.799 - - - microRNA 92b
11. PBX1A ENSDARG00000100494 704 1.543 0.705 0.838 - - - - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
12. lcn15 ENSDARG00000067851 140 1.505 0.794 - - - - - 0.711 - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
13. mfng ENSDARG00000042925 104 1.5 0.733 - - - - 0.767 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
14. pus7 ENSDARG00000031774 195 1.48 0.755 - - - - 0.725 - - - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
15. osbpl11 ENSDARG00000076328 195 1.464 0.701 - - - - - 0.763 - - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
16. si:dkey-222o15.5 si:dkey-222o15.5 27 1.444 0.733 - - - - - - 0.711 -
17. si:ch211-80h18.1 ENSDARG00000078522 1941 1.413 - 0.711 - - - - 0.702 - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
18. pkd2l1 ENSDARG00000022503 372 0.986 - 0.986 - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
19. syt11a ENSDARG00000057913 1145 0.971 - 0.971 - - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
20. ksr2 ENSDARG00000094526 134 0.965 - 0.965 - - - - - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
21. MAP6 MAP6 643 0.965 - 0.965 - - - - - - -
22. plekhm2 ENSDARG00000078850 207 0.962 - 0.962 - - - - - - - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
23. PCDH9 ENSDARG00000063264 1309 0.95 - 0.950 - - - - - - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
24. stx1b ENSDARG00000000503 2724 0.943 - 0.943 - - - - - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
25. CU179656.1 ENSDARG00000107086 270 0.943 - 0.943 - - - - - - -
26. irf1b ENSDARG00000043249 30 0.942 - 0.942 - - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
27. ZBTB26 ENSDARG00000028949 129 0.94 - 0.940 - - - - - - - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
28. gng3 ENSDARG00000009553 2530 0.94 - 0.940 - - - - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
29. rgs7 rgs7 208 0.939 - 0.939 - - - - - - -
30. ift81 ENSDARG00000007444 97 0.939 - 0.939 - - - - - - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
31. tmem179 ENSDARG00000013292 343 0.939 - 0.939 - - - - - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
32. si:ch211-152f6.6 si:ch211-152f6.6 278 0.939 - 0.939 - - - - - - -
33. CHRNB4 ENSDARG00000101677 128 0.939 - 0.939 - - - - - - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
34. scn8aa ENSDARG00000005775 792 0.934 - 0.934 - - - - - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
35. nek1 ENSDARG00000022350 158 0.932 - 0.932 - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
36. NPDC1 NPDC1 126 0.932 - 0.932 - - - - - - -
37. si:dkey-6n6.1 ENSDARG00000062487 222 0.93 - 0.930 - - - - - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
38. EFCAB6 ENSDARG00000020735 34 0.928 - 0.928 - - - - - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
39. zgc:113227 ENSDARG00000058874 266 0.928 - 0.928 - - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
40. neurod neurod 1189 0.928 - 0.928 - - - - - - -
41. CU633988.1 CU633988.1 97 0.923 - - - - - 0.923 - - -
42. TOP1 ENSDARG00000086775 48 0.921 - 0.921 - - - - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
43. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.919 - 0.919 - - - - - - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
44. nrxn2a ENSDARG00000061454 291 0.918 - 0.918 - - - - - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
45. si:dkey-85k15.6 ENSDARG00000094385 4 0.918 - 0.918 - - - - - - - si:dkey-85k15.6 [Source:ZFIN;Acc:ZDB-GENE-100922-216]
46. opn4xb ENSDARG00000103259 18 0.918 - 0.918 - - - - - - - opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
47. PPFIBP1 PPFIBP1 46 0.918 - 0.918 - - - - - - -
48. nkx1.2lb ENSDARG00000099427 220 0.918 - 0.918 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
49. eef1a1a ENSDARG00000039502 234 0.918 - 0.918 - - - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
50. NPPC_1 NPPC_1 11 0.918 - 0.918 - - - - - - -
51. lrrc4bb ENSDARG00000014792 47 0.917 - 0.917 - - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
52. si:ch211-180a12.2 ENSDARG00000087857 2 0.917 - 0.917 - - - - - - - si:ch211-180a12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-236]
53. CABZ01072828.1 CABZ01072828.1 67 0.917 - 0.917 - - - - - - -
54. bco2b ENSDARG00000041715 13 0.917 - 0.917 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
55. eif4a1a ENSDARG00000092115 46 0.917 - 0.917 - - - - - - - eukaryotic translation initiation factor 4A1A [Source:ZFIN;Acc:ZDB-GENE-031030-2]
56. armc5 ENSDARG00000078083 114 0.917 - 0.917 - - - - - - - armadillo repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7382]
57. matn1 ENSDARG00000030215 11 0.917 - 0.917 - - - - - - - matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
58. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 0.916 - 0.916 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
59. arl11l arl11l 31 0.916 - 0.916 - - - - - - -
60. si:ch211-195h23.4 ENSDARG00000093337 1 0.916 - 0.916 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
61. crispld1a ENSDARG00000077275 7 0.916 - 0.916 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
62. CLSTN2 ENSDARG00000060637 41 0.916 - 0.916 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
63. slc26a6l ENSDARG00000054127 8 0.916 - 0.916 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
64. AGO3 AGO3 12 0.916 - 0.916 - - - - - - -
65. casp6 ENSDARG00000093405, ENSDARG00000115863 11 0.916 - 0.916 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
66. hcst ENSDARG00000092074 172 0.916 - 0.916 - - - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
67. CABZ01084273.1 CABZ01084273.1 16 0.916 - 0.916 - - - - - - -
68. CLDN20 26 0.916 - 0.916 - - - - - - - claudin 20, transcript variant X2
69. TRPC4_1 TRPC4_1 212 0.916 - 0.916 - - - - - - -
70. tekt1 ENSDARG00000101331 27 0.916 - 0.916 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
71. CABZ01086828.1 CABZ01086828.1 1 0.916 - 0.916 - - - - - - -
72. pvrl4 155 0.916 - 0.916 - - - - - - - poliovirus receptor-related 4
73. ttc6 ENSDARG00000104125 7 0.916 - 0.916 - - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
74. PLCXD1_3 PLCXD1_3 35 0.916 - 0.916 - - - - - - -
75. aspn ENSDARG00000002192 218 0.916 - 0.916 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
76. KCNAB2 KCNAB2 129 0.916 - 0.916 - - - - - - -
77. si:dkey-6n3.3 si:dkey-6n3.3 9 0.916 - 0.916 - - - - - - -
78. GTPBP6 ENSDARG00000061091 29 0.916 - 0.916 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
79. si:dkey-19f21.8 si:dkey-19f21.8 12 0.916 - 0.916 - - - - - - -
80. si:dkey-106c17.1 si:dkey-106c17.1 26 0.916 - 0.916 - - - - - - -
81. si:dkeyp-79c2.1 42 0.916 - 0.916 - - - - - - - si:dkeyp-79c2.1, transcript variant X2
82. cdh10 cdh10 38 0.916 - 0.916 - - - - - - -
83. cdk20 ENSDARG00000003867 27 0.916 - 0.916 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
84. si:ch211-113a14.15_1 2 0.916 - 0.916 - - - - - - - si:ch211-113a14.15
85. CACNA2D1 ENSDARG00000073752 6 0.916 - 0.916 - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
86. gucy1b3 92 0.916 - 0.916 - - - - - - - guanylate cyclase 1, soluble, beta 3
87. pdia2 ENSDARG00000018263 74 0.916 - 0.916 - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
88. BX548000.1 ENSDARG00000099044 45 0.916 - 0.916 - - - - - - -
89. si:ch73-166n24.2 si:ch73-166n24.2 1 0.916 - 0.916 - - - - - - -
90. kcnc2 ENSDARG00000057468 12 0.916 - 0.916 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
91. ACTR3_1 ACTR3_1 2 0.916 - 0.916 - - - - - - -
92. abcc6a ENSDARG00000016750 10 0.916 - 0.916 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
93. lingo1b ENSDARG00000035899 86 0.916 - 0.916 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
94. U6_32 U6_32 0 0.916 - 0.916 - - - - - - -
95. cx39.4 ENSDARG00000070357 17 0.916 - 0.916 - - - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
96. CABZ01030107.1 ENSDARG00000058631 52 0.916 - 0.916 - - - - - - -
97. mybl1 ENSDARG00000030999 158 0.916 - 0.916 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
98. HIST1H2BA ENSDARG00000116654 10 0.916 - 0.916 - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
99. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 0.916 - 0.916 - - - - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
100. yjefn3 ENSDARG00000061692 211 0.916 - 0.916 - - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]

There are 1073 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA