Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snrnp200

Gene Name Gene ID Reads Annotation
snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]










Genes with expression patterns similar to snrnp200

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
2. brd8 ENSDARG00000025071 2605 2.33 - 0.739 - - - 0.839 - 0.752 - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
3. knop1 ENSDARG00000077721 2198 2.281 - 0.810 0.743 - - 0.728 - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
4. C17H15orf57 C17H15orf57 1366 1.805 - - - - - 0.828 - 0.977 -
5. map2k6 ENSDARG00000099184 8741 1.798 - - - - - 0.874 - 0.924 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
6. CABZ01057013.1 CABZ01057013.1 1308 1.791 - - - - - 0.873 - 0.918 -
7. rabac1 ENSDARG00000004171 2708 1.791 - - - - - 0.865 - 0.926 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
8. elovl6l ENSDARG00000038639 1184 1.79 - - - - - 0.841 - 0.949 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
9. pes ENSDARG00000018902 3286 1.788 - 0.840 - - - - - 0.948 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
10. casc5 1487 1.78 - - - - - 0.822 - 0.958 - cancer susceptibility candidate 5, transcript variant X3
11. tom1 ENSDARG00000104581 1457 1.771 - - - - - 0.830 - 0.941 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
12. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.761 - - - - - 0.794 - 0.967 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
13. hif1al ENSDARG00000100826 18627 1.757 - - - - 0.998 0.759 - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
14. igfbp1a ENSDARG00000099351 1717 1.757 - 0.806 - - - - - 0.951 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
15. arpc5a ENSDARG00000039142 5482 1.745 - - - - - 0.781 - 0.964 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
16. WDR77 2463 1.744 - 0.760 - - - - - 0.984 - WD repeat domain 77
17. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.744 - - - - - 0.817 - 0.927 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
18. qars ENSDARG00000010316 2715 1.743 - 0.788 - - - - - 0.955 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
19. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.74 - 0.849 - - - 0.891 - - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
20. slc39a7 ENSDARG00000104451 6368 1.73 - - - - - 0.874 - 0.856 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
21. scaf11 ENSDARG00000045885 3531 1.721 - - - 0.747 - - - 0.974 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
22. EEF1E1 ENSDARG00000071774 3806 1.719 - 0.833 - - - 0.886 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
23. si:dkey-204f11.64 ENSDARG00000094695 586 1.718 - - - - - - - 0.970 0.748 si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
24. bcar1 ENSDARG00000056525 6563 1.714 - - - - - 0.837 - 0.877 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
25. COL13A1 1565 1.709 - 0.760 - - - - - 0.949 - collagen, type XIII, alpha 1, transcript variant X1
26. optc ENSDARG00000014358 1295 1.704 - 0.767 - - - 0.937 - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
27. dusp7 ENSDARG00000101413 1307 1.703 - - - - - 0.774 - 0.929 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
28. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.702 - - 0.728 - - - - 0.974 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
29. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.702 - - - 0.778 - - - 0.924 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
30. srpk3 ENSDARG00000005916 1546 1.697 - 0.853 - - - 0.844 - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
31. agk ENSDARG00000009837, ENSDARG00000113514 811 1.693 - 0.717 - - - - - 0.976 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
32. rdh12 ENSDARG00000018069 396 1.689 - - - - - - - 0.976 0.713 retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
33. hcfc1b ENSDARG00000012519 3633 1.686 - - 0.717 - - - - 0.969 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
34. si:dkey-238o14.5 si:dkey-238o14.5 450 1.684 - 0.709 - - - - - 0.975 -
35. C2H6orf52 C2H6orf52 2847 1.68 - 0.817 - - - 0.863 - - -
36. MARK4 ENSDARG00000024966 3377 1.678 - - - - - - 0.730 0.948 - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
37. mif ENSDARG00000071336 1328 1.676 - 0.785 - - - 0.891 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
38. rbm34 ENSDARG00000101877 1573 1.674 - - - - - 0.889 0.785 - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
39. ccdc25 ENSDARG00000021753 3837 1.666 - 0.771 - - - 0.895 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
40. rrbp1a ENSDARG00000013763 4723 1.656 - - - - - 0.823 - 0.833 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
41. si:ch211-11k18.4 ENSDARG00000087869 3298 1.655 - - - - - 0.754 - 0.901 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
42. rhot2 ENSDARG00000056328 1123 1.653 - 0.721 - - - 0.932 - - - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
43. cuedc1b ENSDARG00000054748 1638 1.648 - 0.720 - - - - - 0.928 - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
44. G3BP2_1 G3BP2_1 2390 1.64 - - - - - 0.709 - 0.931 -
45. fgf6a ENSDARG00000009351 799 1.633 - 0.782 - - - 0.851 - - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
46. nhsa ENSDARG00000070227 686 1.631 - 0.909 - - - - 0.722 - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
47. hsbp1a ENSDARG00000069425 1086 1.629 - 0.782 - - - 0.847 - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
48. tns1 tns1 5891 1.628 - 0.764 - - - 0.864 - - -
49. cdc20 ENSDARG00000100741 3264 1.627 - - - 0.760 - 0.867 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
50. hoxb10a ENSDARG00000011579 2135 1.622 0.711 - - - - - - 0.911 - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
51. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 1.617 - - - - - - - 0.914 0.703 histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
52. mafk ENSDARG00000100947 1460 1.61 - - - - - 0.892 0.718 - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
53. fkbp2 ENSDARG00000044540 1615 1.61 - - - - - 0.906 0.704 - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
54. bcas2 ENSDARG00000043631 1971 1.606 - - - - - 0.850 0.756 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
55. BX649554.3_1 BX649554.3_1 1071 1.603 - - - - - - - 0.901 0.702
56. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.599 - - - - - 0.877 0.722 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
57. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 1.599 - - - - - 0.847 - - 0.752 protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
58. qdprb1 ENSDARG00000037378, ENSDARG00000115067, ENSDARG00000115308 338 1.597 - 0.736 - - - - 0.861 - - quinoid dihydropteridine reductase b1 [Source:ZFIN;Acc:ZDB-GENE-050522-320]
59. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.597 - 0.721 - 0.876 - - - - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
60. lin52 ENSDARG00000070833 2271 1.597 - - - - - 0.829 - - 0.768 lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
61. ptp4a3 ENSDARG00000039997 1964 1.596 - 0.800 - - - 0.796 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
62. SRGAP3 ENSDARG00000060309 5353 1.592 - - 0.712 - - - - 0.880 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
63. FSD2 518 1.591 - 0.773 - - - 0.818 - - - fibronectin type III and SPRY domain containing 2
64. rab5if ENSDARG00000074790 8807 1.589 - 0.742 - - - - - 0.847 - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
65. sh3rf1 ENSDARG00000070470 1463 1.579 - 0.721 - - - 0.858 - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
66. metap2b_1 ENSDARG00000102571 5507 1.575 - - - - - 0.832 0.743 - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
67. ptrhd1 ENSDARG00000016122 2705 1.571 - 0.702 - - - 0.869 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
68. TSPAN4 TSPAN4 941 1.567 - 0.746 - - - 0.821 - - -
69. CABZ01008011.1 CABZ01008011.1 761 1.565 - - - - - 0.825 0.740 - -
70. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.563 - - 0.728 0.835 - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
71. mef2ca ENSDARG00000029764 18547 1.56 - 0.709 - - - - - 0.851 - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
72. guk1a ENSDARG00000030340 517 1.558 - - - - - 0.840 - - 0.718 guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
73. CACUL1 ENSDARG00000021885 691 1.555 - 0.713 - - - 0.842 - - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
74. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.55 - - - 0.768 - 0.782 - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
75. zgc:158309 zgc:158309 2696 1.547 - 0.805 - - - - - - 0.742
76. si:dkey-13i19.8 ENSDARG00000093058 4617 1.545 - 0.721 - - - 0.824 - - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
77. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.541 - - - - - 0.790 - 0.751 - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
78. prep ENSDARG00000057151 3016 1.54 - 0.735 - - - 0.805 - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
79. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.537 - - - 0.717 - - 0.820 - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
80. gpx7 ENSDARG00000091511 3045 1.522 - 0.714 - - - 0.808 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
81. meis2b ENSDARG00000077840 5166 1.517 - 0.716 - - - 0.801 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
82. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 1.516 - - - - - 0.761 - - 0.755 solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
83. tmem242 ENSDARG00000037070 1081 1.507 - 0.769 - - - - - - 0.738 transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
84. ubr5 ENSDARG00000018192 9267 1.506 - 0.772 0.734 - - - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
85. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.5 - 0.709 - - - 0.791 - - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
86. papolg ENSDARG00000012141 1445 1.493 - 0.753 - 0.740 - - - - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
87. atrn ENSDARG00000062164, ENSDARG00000110632 668 1.492 0.727 - - - - - - - 0.765 attractin [Source:ZFIN;Acc:ZDB-GENE-090312-21]
88. CR318593.1 CR318593.1 290 1.482 - - - - - - 0.754 - 0.728
89. znf185 ENSDARG00000103917 7195 1.478 - - - - - 0.720 - 0.758 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
90. ZNF281 ZNF281 1946 1.477 - - - 0.714 - 0.763 - - -
91. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.476 - - - - - - 0.735 - 0.741 MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
92. frmd6 ENSDARG00000002332 2698 1.466 - 0.724 - - - 0.742 - - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
93. gstm gstm 4064 1.456 - 0.748 - - - 0.708 - - -
94. kmt2bb ENSDARG00000060697 5230 1.456 - 0.750 0.706 - - - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
95. prmt1 ENSDARG00000010246 11311 1.454 - 0.744 0.710 - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
96. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.453 - 0.713 - - - - - 0.740 - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
97. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 1.452 - 0.740 - - - - 0.712 - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
98. TCF24 ENSDARG00000086944 518 1.449 - 0.729 - 0.720 - - - - - transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
99. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.447 - 0.733 - 0.714 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
100. si:ch211-288g17.3 ENSDARG00000070959 2425 1.447 - - 0.726 - - - - 0.721 - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]

There are 1662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA