Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snoZ39

Gene Name Gene ID Reads Annotation
snoZ39 snoZ39 2











Genes with expression patterns similar to snoZ39

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. snoZ39 snoZ39 2 2 - - - - - - - 1.000 - 1.000
2. ABTB2 ENSGALG00000031889 9 1 - - - - - - - - - 1.000 ankyrin repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23842]
3. GABRA5 ENSGALG00000016744 12 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
4. STAT4 ENSGALG00000033087 7 1 - - - - - - - - - 1.000 signal transducer and activator of transcription 4 [Source:NCBI gene;Acc:768406]
5. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - - - 1.000 - -
6. SYT12 ENSGALG00000004306 2 1 - - - - - - - - - 1.000 synaptotagmin 12 [Source:NCBI gene;Acc:422998]
7. SLC12A1 ENSGALG00000004945 18 1 - - - - - - - - - 1.000 solute carrier family 12 member 1 [Source:HGNC Symbol;Acc:HGNC:10910]
8. ACACB 6 1 - - - - - - - 1.000 - - acetyl-CoA carboxylase beta
9. SPATA4 ENSGALG00000010822 4 1 - - - - - - - 1.000 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
10. TREM-B1 ENSGALG00000003361 8 1 - - - - - - - 1.000 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
11. ADAM20 ENSGALG00000013838, ENSGALG00000021341 5 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
12. ENSGALG00000007855 ENSGALG00000007855 7 1 - - - - - - - - - 1.000
13. GTPBP6 ENSGALG00000016717 17 1 - - - - - - - 1.000 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
14. MUC13 7 1 - - - - - - - 1.000 - - mucin 13, cell surface associated, transcript variant X10
15. VPREB3 ENSGALG00000021136 1 1 - - - - - - - - - 1.000 V-set pre-B cell surrogate light chain 3 [Source:HGNC Symbol;Acc:HGNC:12710]
16. KCNT2 ENSGALG00000041680 36 1 - - - - - - - - - 1.000 potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
17. DBN1 ENSGALG00000033405 216 1 - - - - - - - 1.000 - - drebrin 1 [Source:NCBI gene;Acc:396496]
18. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 1 - - - - - - - 1.000 - - family with sequence similarity 214 member B, transcript variant X14
19. ALKBH3 ENSGALG00000041309 7 1 - - - - - - - 1.000 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
20. PGAP1 ENSGALG00000030789 3 1 - - - - - - - - - 1.000 post-GPI attachment to proteins 1, transcript variant X3
21. PPEF1 ENSGALG00000016522 3 1 - - - - - - - - - 1.000 protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]
22. STEAP2 ENSGALG00000009017 10 1 - - - - - - - - - 1.000 STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
23. CFUC-TIX CFUC-TIX 1 1 - - - - - - - - - 1.000
24. ENSGALG00000004511 ENSGALG00000004511 2 1 - - - - - - - - - 1.000
25. SLC30A8 ENSGALG00000034377 3 1 - - - - - - - 1.000 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
26. CD101 12 1 - - - - - - - 1.000 - - CD101 molecule, transcript variant X4
27. ENSGALG00000023353 ENSGALG00000023353 1 1 - - - - - - - 1.000 - -
28. CDHR1 ENSGALG00000002314 24 1 - - - - - - - 1.000 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
29. AMER3 ENSGALG00000041501 5 1 - - - - - - - - - 1.000 APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
30. GP5 ENSGALG00000045125 3 1 - - - - - - - 1.000 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
31. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
32. GSAP ENSGALG00000008312 12 1 - - - - - - - 1.000 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
33. MIP-3ALPHA MIP-3ALPHA 14 1 - - - - - - - - - 1.000
34. SOX10 ENSGALG00000012290 3942 1 - - - - - - - 1.000 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
35. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - - 1.000 - -
36. HBP1 ENSGALG00000008050 19 1 - - - - - - - 1.000 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
37. STEAP1 ENSGALG00000009006 16 1 - - - - - - - - - 1.000 STEAP family member 1
38. SUSD1 ENSGALG00000015677 12 1 - - - - - - - 1.000 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
39. WNT3 ENSGALG00000001079 8 1 - - - - - - - - - 1.000 Wnt family member 3 [Source:NCBI gene;Acc:374142]
40. C16orf52 C16orf52 1 1 - - - - - - - - - 1.000
41. PIWIL1 ENSGALG00000002645 23 1 - - - - - - - - - 1.000 piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
42. ENSGALG00000025801 ENSGALG00000025801 5 1 - - - - - - - - - 1.000
43. RYR2 ENSGALG00000010812 95 1 - - - - - - - - - 1.000 ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
44. C1orf228 3 1 - - - - - - - 1.000 - - chromosome 1 open reading frame 228, transcript variant X5
45. SFT2D2 ENSGALG00000019228 10 1 - - - - - - - 1.000 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
46. GPR17 ENSGALG00000037153 3 1 - - - - - - - 1.000 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
47. CHRNA1 ENSGALG00000009301 2 1 - - - - - - - - - 1.000 cholinergic receptor nicotinic alpha 1 subunit [Source:NCBI gene;Acc:395608]
48. SWAP70 ENSGALG00000005750 32 0.997 - - - - - - - 0.997 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
49. GABRA2 ENSGALG00000014206 19 0.994 - - - - - - - 0.994 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
50. PTBP3 ENSGALG00000015669 16 0.984 - - - - - - - 0.984 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
51. CDH7 ENSGALG00000013782 11 0.983 - - - - - - - - - 0.983 cadherin 7 [Source:NCBI gene;Acc:374007]
52. TOM1L2 ENSGALG00000004902 89 0.978 - - - - - - - 0.978 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
53. NMRAL1 ENSGALG00000029820 29 0.97 - - - - - - - 0.970 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
54. SRRL ENSGALG00000002638 26 0.97 - - - - - - - 0.970 - - serine racemase-like, transcript variant X8
55. INSC ENSGALG00000032558 74 0.968 - - - - - - - 0.968 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
56. PRKRIR PRKRIR 46 0.968 - - - - - - - 0.968 - -
57. ENSGALG00000020972 ENSGALG00000020972 54 0.955 - - - - - - - 0.955 - -
58. MAP3K13 ENSGALG00000006655 632 0.954 - - - - - - - 0.954 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
59. HECTD2 ENSGALG00000038043 177 0.953 - - - - - - - 0.953 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
60. ZP1 ENSGALG00000031916 122 0.953 - - - - - - - 0.953 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
61. URB2 ENSGALG00000011101 12 0.953 - - - - - - - 0.953 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
62. CHGB ENSGALG00000046616 357 0.948 - - - - - - - 0.948 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
63. RAB43 ENSGALG00000005021 5 0.946 - - - - - - - 0.946 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
64. PWWP2B ENSGALG00000010491 30 0.945 - - - - - - - 0.945 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
65. BFIV21 BFIV21 30 0.938 - - - - - - - 0.938 - -
66. ZNF507 ENSGALG00000004532 78 0.938 - - - - - - - 0.938 - - zinc finger protein 507, transcript variant X2
67. SLC35A3 12 0.936 - - - - - - - - - 0.936 solute carrier family 35 member A3, transcript variant X7
68. BBS9 ENSGALG00000031650 13 0.935 - - - - - - - 0.935 - - Bardet-Biedl syndrome 9, transcript variant X5
69. RAD54L2 ENSGALG00000003243 187 0.933 - - - - - - - 0.933 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
70. ENSGALG00000026913 ENSGALG00000026913 12 0.928 - - - - - - - - - 0.928
71. PTPRQ ENSGALG00000010935 626 0.922 - - - - - - - 0.922 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
72. ENSGALG00000026756 ENSGALG00000026756 134 0.922 - - - - - - - 0.922 - -
73. IQUB ENSGALG00000008823 65 0.908 - - - - - - - 0.908 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
74. CCM2L ENSGALG00000006479 344 0.905 - - - - - - - - - 0.905 CCM2 like scaffold protein [Source:HGNC Symbol;Acc:HGNC:16153]
75. IKZF1 ENSGALG00000013086 58 0.902 - - - - - - - 0.902 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
76. SSBP2 ENSGALG00000023089 131 0.893 - - - - - - - 0.893 - - single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
77. ENSGALG00000023735 ENSGALG00000023735 12 0.893 - - - - - - - 0.893 - -
78. LOC416530 ENSGALG00000005291 207 0.893 - - - - - - - 0.893 - - uncharacterized LOC416530, transcript variant X1
79. ECSCR ENSGALG00000024379 313 0.887 - - - - - - - 0.887 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
80. gga-mir-2954 ENSGALG00000026107 462 0.878 - - - - - - - 0.878 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
81. C15orf61 ENSGALG00000028141 56 0.875 - - - - - - - 0.875 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
82. ENSGALG00000005227 ENSGALG00000005227 2 0.873 - - - - - - - - - 0.873
83. SLC7A10 ENSGALG00000004729 13 0.873 - - - - - - - - - 0.873 solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
84. CLEC18B ENSGALG00000027183 284 0.873 - - - - - - - 0.873 - - C-type lectin domain family 18 member B, transcript variant X2
85. ENSGALG00000003618 ENSGALG00000003618 12 0.872 - - - - - - - - - 0.872
86. CMYA5 16 0.87 - - - - - - - - - 0.870 cardiomyopathy associated 5
87. WNT4 ENSGALG00000041708 1277 0.87 - - - - - - - 0.870 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
88. MLH3 ENSGALG00000010304 231 0.868 - - - - - - - 0.868 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
89. PLAGL2 ENSGALG00000006586 3 0.868 - - - - - - - - - 0.868 PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
90. CLDN12 ENSGALG00000009038 16 0.868 - - - - - - - - - 0.868 claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
91. ADAMTS7 7 0.868 - - - - - - - - - 0.868 ADAM metallopeptidase with thrombospondin type 1 motif 7
92. FANCF ENSGALG00000003660 25 0.859 - - - - - - - 0.859 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
93. UPRT ENSGALG00000007793 321 0.859 - - - - - - - 0.859 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
94. CRB2 ENSGALG00000001169 23 0.851 - - - - - - - - - 0.851 crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
95. LHFP 167 0.845 - - - - - - - 0.845 - - lipoma HMGIC fusion partner
96. B3GALT6 ENSGALG00000001859 5 0.836 - - - - - - - - - 0.836 beta-1,3-galactosyltransferase 6
97. ENSGALG00000025714 ENSGALG00000025714 6 0.833 - - - - - - - - - 0.833
98. KIAA1147 ENSGALG00000012874 3 0.833 - - - - - - - - - 0.833 KIAA1147 [Source:HGNC Symbol;Acc:HGNC:29472]
99. USH1C ENSGALG00000006192 63 0.83 - - - - - - - 0.830 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
100. CDK5RAP3 ENSGALG00000036452 693 0.828 - - - - - - - 0.828 - - CDK5 regulatory subunit associated protein 3 [Source:NCBI gene;Acc:430350]

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA