Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snoU85_1

Gene Name Gene ID Reads Annotation
snoU85_1 snoU85_1 2










Genes with expression patterns similar to snoU85_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BX248410.1 ENSDARG00000090038 3 1 - - 1.000 - - - - - - Schwann cell myelin protein-like [Source:NCBI gene;Acc:101884775]
2. RPGRIP1 ENSDARG00000076055 10 1 - - 1.000 - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
3. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - 1.000 - - - - - -
4. snoU85_1 snoU85_1 2 1 - - 1.000 - - - - - -
5. dnali1 ENSDARG00000069815 10 1 - - 1.000 - - - - - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
6. si:dkey-222o15.2 2 1 - - 1.000 - - - - - - si:dkey-222o15.2, transcript variant X2
7. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - 1.000 - - - - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
8. si:dkey-24h22.5 ENSDARG00000094556 4 1 - - 1.000 - - - - - - si:dkey-24h22.5 [Source:ZFIN;Acc:ZDB-GENE-090313-274]
9. C20H2orf70 C20H2orf70 8 1 - - 1.000 - - - - - -
10. zgc:112437 ENSDARG00000009215 50 1 - - 1.000 - - - - - - zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
11. CR388046.1 ENSDARG00000102930 2 1 - - 1.000 - - - - - -
12. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - 1.000 - - - - - -
13. si:dkey-71b5.7 ENSDARG00000080675 94 0.997 - - 0.997 - - - - - - si:dkey-71b5.7 [Source:ZFIN;Acc:ZDB-GENE-100922-124]
14. dyrk1aa ENSDARG00000063570 14 0.996 - - 0.996 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
15. si:dkey-14d8.1 ENSDARG00000095332 11 0.996 - - 0.996 - - - - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
16. si:dkey-28d5.7 si:dkey-28d5.7 2 0.994 - - 0.994 - - - - - -
17. CCDC178 4 0.992 - - 0.992 - - - - - - coiled-coil domain containing 178, transcript variant X3
18. ak7b ENSDARG00000017023 25 0.991 - - 0.991 - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
19. si:dkey-217m5.3 si:dkey-217m5.3 22 0.99 - - 0.990 - - - - - -
20. ccdc113 ENSDARG00000006981 67 0.986 - - 0.986 - - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
21. acap3b ENSDARG00000099240 24 0.986 - - 0.986 - - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
22. si:dkey-20i20.10 ENSDARG00000095455 3 0.985 - - 0.985 - - - - - - si:dkey-20i20.10 [Source:ZFIN;Acc:ZDB-GENE-060503-905]
23. CDH24_1 CDH24_1 7 0.982 - - 0.982 - - - - - -
24. KCNJ12 KCNJ12 17 0.981 - - 0.981 - - - - - -
25. si:dkey-21n8.3 si:dkey-21n8.3 5 0.978 - - 0.978 - - - - - -
26. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 0.977 - - 0.977 - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
27. si:ch211-251p5.3 si:ch211-251p5.3 39 0.97 - - 0.970 - - - - - -
28. psmb9a ENSDARG00000000656 16 0.966 - - 0.966 - - - - - - proteasome subunit beta 9a [Source:ZFIN;Acc:ZDB-GENE-990415-140]
29. lrrc48 lrrc48 50 0.964 - - 0.964 - - - - - -
30. gria1b ENSDARG00000032714, ENSDARG00000111658 12 0.964 - - 0.964 - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
31. rdh12l ENSDARG00000045277 139 0.963 - - 0.963 - - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
32. zgc:193811 ENSDARG00000076745 72 0.962 - - 0.962 - - - - - - zgc:193811 [Source:ZFIN;Acc:ZDB-GENE-081022-43]
33. ccdc170 ENSDARG00000016161 18 0.953 - - 0.953 - - - - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
34. MPP7 MPP7 9 0.95 - - 0.950 - - - - - -
35. fam184a ENSDARG00000014081 93 0.947 - - 0.947 - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
36. nkx1.2la ENSDARG00000006350 76 0.94 - - 0.940 - - - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
37. PEG3_22 PEG3_22 33 0.937 - - 0.937 - - - - - -
38. si:dkey-82i20.3 si:dkey-82i20.3 6 0.935 - - 0.935 - - - - - -
39. si:dkey-15h14.4 si:dkey-15h14.4 118 0.934 - - 0.934 - - - - - -
40. si:ch211-13o20.1 si:ch211-13o20.1 30 0.934 - - 0.934 - - - - - -
41. si:dkey-176f19.2 si:dkey-176f19.2 6 0.928 - - 0.928 - - - - - -
42. USH1G USH1G 25 0.927 - - 0.927 - - - - - -
43. si:dkey-202b22.6 ENSDARG00000045552 190 0.914 - - 0.914 - - - - - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
44. GRINA GRINA 12 0.912 - - 0.912 - - - - - -
45. si:dkey-51d8.9 ENSDARG00000096217 47 0.909 - - 0.909 - - - - - - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
46. HIST1H4J_4 HIST1H4J_4 9 0.903 - - 0.903 - - - - - -
47. chd 56 0.9 - - 0.900 - - - - - - chordin
48. stx11a ENSDARG00000044039 39 0.898 - - 0.898 - - - - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
49. ctskl ctskl 17 0.898 - - 0.898 - - - - - -
50. ccdc11 ccdc11 79 0.896 - - 0.896 - - - - - -
51. si:dkey-3b8.4 si:dkey-3b8.4 13 0.896 - - 0.896 - - - - - -
52. si:dkey-147f3.8 ENSDARG00000092166 28 0.893 - - 0.893 - - - - - - si:dkey-147f3.8 [Source:ZFIN;Acc:ZDB-GENE-061009-32]
53. BX004785.4 BX004785.4 7 0.873 - - 0.873 - - - - - -
54. xrra1 ENSDARG00000089578 18 0.873 - - 0.873 - - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
55. C22H19orf10_1 C22H19orf10_1 30 0.868 - - 0.868 - - - - - -
56. EDN3_1 EDN3_1 24 0.865 - - 0.865 - - - - - -
57. CABZ01064671.1 ENSDARG00000039935 21 0.865 - - 0.865 - - - - - -
58. CR762484.2 CR762484.2 42 0.864 - - 0.864 - - - - - -
59. lipt2 ENSDARG00000069852 14 0.862 - - 0.862 - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
60. itm1 itm1 32 0.858 - - 0.858 - - - - - -
61. CU693494.3 CU693494.3 169 0.855 - - 0.855 - - - - - -
62. CABZ01068600.1 ENSDARG00000113454 18 0.853 - - 0.853 - - - - - -
63. figf 48 0.853 - - 0.853 - - - - - - c-fos induced growth factor, transcript variant X2
64. zgc:173709 86 0.853 - - 0.853 - - - - - - zgc:173709
65. CMA1_4 CMA1_4 23 0.852 - - 0.852 - - - - - -
66. mipol1 ENSDARG00000104845 6 0.852 - - 0.852 - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
67. CABZ01039859.1 ENSDARG00000076361 540 0.85 - - 0.850 - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
68. CU570781.1 ENSDARG00000094656 49 0.846 - - 0.846 - - - - - -
69. map6 map6 70 0.845 - - 0.845 - - - - - -
70. dnaaf2 ENSDARG00000103132 24 0.84 - - 0.840 - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
71. hoxc13b ENSDARG00000113877 549 0.84 - - 0.840 - - - - - - homeobox C13b [Source:ZFIN;Acc:ZDB-GENE-000822-5]
72. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 0.838 - - 0.838 - - - - - -
73. scxa ENSDARG00000035695 255 0.833 - - 0.833 - - - - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
74. U2_4 U2_4 41 0.832 - - 0.832 - - - - - -
75. si:dkey-229d11.5 ENSDARG00000094392 33 0.829 - - 0.829 - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
76. GALNT16 ENSDARG00000053190 250 0.828 - - 0.828 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
77. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 0.826 - - 0.826 - - - - - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
78. C5H4orf22 C5H4orf22 117 0.826 - - 0.826 - - - - - -
79. ano2 ENSDARG00000101363 50 0.822 - - 0.822 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
80. zgc:174224_2 ENSDARG00000093875 22 0.82 - - 0.820 - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
81. zgc:193690 34 0.817 - - 0.817 - - - - - - zgc:193690
82. fasn_1 ENSDARG00000087657 31 0.813 - - 0.813 - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
83. UBXN11 ENSDARG00000053828 22 0.807 - - 0.807 - - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
84. CCDC13 ENSDARG00000063451 10 0.807 - - 0.807 - - - - - - coiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
85. MAP3K2 ENSDARG00000062884 34 0.795 - - 0.795 - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
86. adprm ENSDARG00000026090 91 0.793 - - 0.793 - - - - - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
87. C25H19orf40 C25H19orf40 17 0.791 - - 0.791 - - - - - -
88. TOR4A_1 TOR4A_1 20 0.791 - - 0.791 - - - - - -
89. CT573393.1 CT573393.1 97 0.787 - - 0.787 - - - - - -
90. dyx1c1 dyx1c1 36 0.781 - - 0.781 - - - - - -
91. pip5k1ca ENSDARG00000076001 53 0.78 - - 0.780 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a [Source:ZFIN;Acc:ZDB-GENE-050208-358]
92. phlda3 ENSDARG00000037804 1116 0.779 - - 0.779 - - - - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
93. SNX20 ENSDARG00000045554 77 0.777 - - 0.777 - - - - - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
94. TPMT TPMT 138 0.777 - - 0.777 - - - - - -
95. CCDC176_1 CCDC176_1 126 0.776 - - 0.776 - - - - - -
96. btbd3b ENSDARG00000087517 107 0.773 - - 0.773 - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
97. zgc:173713 17 0.771 - - 0.771 - - - - - - zgc:173713, transcript variant X2
98. plch2a ENSDARG00000059960 222 0.766 - - 0.766 - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
99. si:dkey-269d20.3 si:dkey-269d20.3 40 0.765 - - 0.765 - - - - - -
100. CABZ01058048.1 CABZ01058048.1 268 0.761 - - 0.761 - - - - - -

There are 21 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA