Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snoR38

Gene Name Gene ID Reads Annotation
snoR38 snoR38 1068










Genes with expression patterns similar to snoR38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snoR38 snoR38 1068 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fam63b 484 1.785 - 0.906 - - - - 0.879 - - family with sequence similarity 63, member B
3. tex261 ENSDARG00000044584 513 1.653 - 0.860 - - - - - 0.793 - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
4. hnrnph1 ENSDARG00000040881 304 1.62 - 0.825 - - - - - 0.795 - heterogeneous nuclear ribonucleoprotein H1 [Source:ZFIN;Acc:ZDB-GENE-040426-1856]
5. RNF130 ENSDARG00000089767 559 1.6 - 0.862 - - - - - 0.738 - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
6. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.591 - 0.866 - - - - - 0.725 - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
7. pex16 ENSDARG00000058202 486 1.545 - 0.814 - - - - 0.731 - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
8. NIPBL NIPBL 871 1.474 - 0.743 - - - - - 0.731 -
9. smfn ENSDARG00000009806 1280 1.467 - 0.713 - - - - 0.754 - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
10. atp5s ENSDARG00000012072 294 0.963 - 0.963 - - - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]
11. usp12a ENSDARG00000078109 490 0.957 - 0.957 - - - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
12. wnt7aa ENSDARG00000044827 645 0.955 - 0.955 - - - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
13. zgc:136474 zgc:136474 658 0.951 - 0.951 - - - - - - -
14. flt4 ENSDARG00000104453 557 0.951 - 0.951 - - - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
15. jkamp ENSDARG00000028581 893 0.948 - 0.948 - - - - - - - jnk1/mapk8 associated membrane protein [Source:ZFIN;Acc:ZDB-GENE-040718-382]
16. gga3 ENSDARG00000103667 675 0.947 - 0.947 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
17. serpine2 ENSDARG00000029353 2274 0.94 - 0.940 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
18. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.939 - 0.939 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
19. TMEM71 TMEM71 696 0.939 - 0.939 - - - - - - -
20. lcn15 ENSDARG00000067851 140 0.937 - 0.937 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
21. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.936 - 0.936 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
22. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.936 - 0.936 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
23. tial1 ENSDARG00000009525 1856 0.934 - 0.934 - - - - - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
24. si:ch73-18b11.2 ENSDARG00000094978 148 0.931 - 0.931 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
25. esrrd ENSDARG00000015064 291 0.929 - 0.929 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
26. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 0.926 - 0.926 - - - - - - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
27. SEC16B ENSDARG00000099554 411 0.926 - 0.926 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
28. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 0.925 - 0.925 - - - - - - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
29. ms4a17a.9 ENSDARG00000094854 933 0.923 - 0.923 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
30. aff4 ENSDARG00000001857 134 0.921 - 0.921 - - - - - - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
31. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.92 - 0.920 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
32. rab40c ENSDARG00000061208 1072 0.92 - 0.920 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
33. cyp2v1 ENSDARG00000018485 694 0.919 - 0.919 - - - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
34. lrrc6 ENSDARG00000053318 146 0.919 - 0.919 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
35. csad ENSDARG00000026348 1461 0.917 - 0.917 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
36. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.914 - 0.914 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
37. mfsd11 ENSDARG00000102828 1043 0.913 - 0.913 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
38. CABZ01066717.1 CABZ01066717.1 351 0.913 - 0.913 - - - - - - -
39. dram2b ENSDARG00000044241 503 0.912 - 0.912 - - - - - - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
40. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.912 - 0.912 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
41. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.912 - 0.912 - - - - - - - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
42. TM2D2 ENSDARG00000035515 561 0.91 - 0.910 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
43. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.91 - 0.910 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
44. CR376783.1 ENSDARG00000074235 259 0.907 - 0.907 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
45. sas sas 1783 0.905 - 0.905 - - - - - - -
46. mettl1 ENSDARG00000076518 366 0.904 - 0.904 - - - - - - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
47. igfbp1b ENSDARG00000038666 163 0.904 - 0.904 - - - - - - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
48. wtap ENSDARG00000042642 1779 0.904 - 0.904 - - - - - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
49. efna5a ENSDARG00000089790 1007 0.903 - 0.903 - - - - - - - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
50. pddc1 pddc1 257 0.903 - 0.903 - - - - - - -
51. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.903 - 0.903 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
52. map7d1b ENSDARG00000104701 1655 0.902 - 0.902 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
53. casp2 ENSDARG00000062052 559 0.902 - 0.902 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
54. tmem8a ENSDARG00000032795 677 0.901 - 0.901 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
55. cmasb 499 0.901 - 0.901 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
56. ckap5 ENSDARG00000102674 5068 0.901 - 0.901 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
57. prkar1ab ENSDARG00000101755 555 0.899 - 0.899 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
58. si:ch211-51h9.7 ENSDARG00000074720 227 0.899 - 0.899 - - - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
59. rab35 rab35 1287 0.898 - 0.898 - - - - - - -
60. phyhiplb ENSDARG00000070498 348 0.898 - 0.898 - - - - - - - phytanoyl-CoA 2-hydroxylase interacting protein-like b [Source:ZFIN;Acc:ZDB-GENE-040927-27]
61. kremen1 ENSDARG00000062579 190 0.897 - 0.897 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
62. kcnj1a.4 ENSDARG00000090635 356 0.897 - 0.897 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
63. zgc:136851 zgc:136851 315 0.895 - 0.895 - - - - - - -
64. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 0.894 - 0.894 - - - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
65. tmem184a ENSDARG00000104538 661 0.894 - 0.894 - - - - - - - transmembrane protein 184a [Source:ZFIN;Acc:ZDB-GENE-040426-2925]
66. zgc:113385 zgc:113385 297 0.894 - 0.894 - - - - - - -
67. tspan5b ENSDARG00000070449 1056 0.894 - 0.894 - - - - - - - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
68. slc4a1ap ENSDARG00000034160 749 0.893 - 0.893 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]
69. BX005256.1 ENSDARG00000106112 467 0.893 - 0.893 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
70. GEMIN7 ENSDARG00000041011 529 0.893 - 0.893 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
71. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.892 - 0.892 - - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
72. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.891 - 0.891 - - - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
73. c8a ENSDARG00000039516 495 0.89 - 0.890 - - - - - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
74. si:dkey-67c22.2 ENSDARG00000055389 6410 0.888 - 0.888 - - - - - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
75. ankrd28b ENSDARG00000009023 960 0.888 - 0.888 - - - - - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
76. slc25a11 ENSDARG00000035741 3377 0.887 - 0.887 - - - - - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
77. NIPAL4 ENSDARG00000059365 597 0.887 - 0.887 - - - - - - - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
78. cflara ENSDARG00000055966 464 0.885 - 0.885 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
79. ccnd2a ENSDARG00000051748 2506 0.885 - 0.885 - - - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
80. alg9 ENSDARG00000012840 631 0.884 - 0.884 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
81. afap1 ENSDARG00000055284 730 0.884 - 0.884 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
82. mrps11 ENSDARG00000075129 1360 0.884 - 0.884 - - - - - - - mitochondrial ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040724-84]
83. c1d ENSDARG00000021112 2839 0.883 - 0.883 - - - - - - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
84. CT485993.2 CT485993.2 1419 0.883 - 0.883 - - - - - - -
85. C12H10orf2 C12H10orf2 245 0.882 - 0.882 - - - - - - -
86. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.881 - 0.881 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
87. fam105bb fam105bb 1253 0.881 - 0.881 - - - - - - -
88. casp3b ENSDARG00000055045 54 0.881 - 0.881 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
89. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.88 - 0.880 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
90. MAP3K2 ENSDARG00000062884 34 0.879 - 0.879 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
91. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.879 - 0.879 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
92. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.879 - 0.879 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
93. si:dkey-114b16.4 si:dkey-114b16.4 35 0.879 - 0.879 - - - - - - -
94. CT573322.1 CT573322.1 38 0.879 - 0.879 - - - - - - -
95. cyp2aa1 ENSDARG00000099003 297 0.878 - 0.878 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
96. smdt1 smdt1 99 0.878 - 0.878 - - - - - - -
97. RBMS1 RBMS1 258 0.878 - 0.878 - - - - - - -
98. cacng6a ENSDARG00000036457 344 0.877 - 0.877 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
99. SLC38A9 ENSDARG00000032769 35 0.877 - 0.877 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
100. unc13d ENSDARG00000078249 91 0.877 - 0.877 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]

There are 632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA