Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snip1_1

Gene Name Gene ID Reads Annotation
snip1_1 ENSDARG00000087528 111 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]










Genes with expression patterns similar to snip1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snip1_1 ENSDARG00000087528 111 6 1.000 - - 1.000 1.000 - 1.000 1.000 1.000 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
2. siva1 ENSDARG00000114552 624 0.901 - - - - - - 0.901 - - SIVA1, apoptosis-inducing factor [Source:ZFIN;Acc:ZDB-GENE-050506-57]
3. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 0.896 0.896 - - - - - - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
4. nrbf2 nrbf2 604 0.882 - - - - - - 0.882 - -
5. rdh8a ENSDARG00000028048 334 0.868 0.868 - - - - - - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
6. im:7160159 im:7160159 294 0.863 0.863 - - - - - - - -
7. bmp7b ENSDARG00000063230 337 0.855 0.855 - - - - - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
8. mknk2a ENSDARG00000011373 230 0.849 0.849 - - - - - - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
9. tyw5 ENSDARG00000069672, ENSDARG00000110022 255 0.846 - - - - - - 0.846 - - tRNA-yW synthesizing protein 5 [Source:ZFIN;Acc:ZDB-GENE-060929-894]
10. dffb ENSDARG00000009748 204 0.845 - - - - - - 0.845 - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]
11. fbxo3 ENSDARG00000029242 529 0.845 - - - - - - 0.845 - - F-box protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-269]
12. CCDC150 CCDC150 991 0.826 0.826 - - - - - - - -
13. tmem178b ENSDARG00000006747 173 0.821 0.821 - - - - - - - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
14. cnpy4 ENSDARG00000055797, ENSDARG00000114769 363 0.817 0.817 - - - - - - - - canopy FGF signaling regulator 4 [Source:ZFIN;Acc:ZDB-GENE-060315-5]
15. pdlim2 ENSDARG00000069956 317 0.816 0.816 - - - - - - - - PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]
16. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 0.815 - - - - - - 0.815 - - polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
17. glyctk ENSDARG00000060120 143 0.81 0.810 - - - - - - - - glycerate kinase [Source:ZFIN;Acc:ZDB-GENE-061013-308]
18. VPS16 ENSDARG00000059902, ENSDARG00000109363 423 0.809 - - - - - - 0.809 - - vacuolar protein sorting protein 16 [Source:ZFIN;Acc:ZDB-GENE-050809-9]
19. slc3a2b ENSDARG00000037012 839 0.801 - - - - - - 0.801 - - solute carrier family 3 (amino acid transporter heavy chain), member 2b [Source:ZFIN;Acc:ZDB-GENE-040122-2]
20. roraa ENSDARG00000031768 278 0.799 0.799 - - - - - - - - RAR-related orphan receptor A, paralog a [Source:ZFIN;Acc:ZDB-GENE-060306-2]
21. wdr48 wdr48 383 0.798 - - - - - - 0.798 - -
22. mych ENSDARG00000077473 911 0.791 0.791 - - - - - - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
23. TMEM57 TMEM57 260 0.789 - - - - - - - 0.789 -
24. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 0.787 - - - - - - 0.787 - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
25. si:dkey-26g8.10 si:dkey-26g8.10 100 0.786 0.786 - - - - - - - -
26. pik3cb ENSDARG00000075253 2075 0.786 0.786 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
27. C8H12orf43 C8H12orf43 50 0.786 - - - - - - - 0.786 -
28. C12H17orf62_1 C12H17orf62_1 83 0.784 - - - - - - 0.784 - -
29. hprt1l ENSDARG00000014866 696 0.784 0.784 - - - - - - - - hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
30. CU683898.1 CU683898.1 203 0.783 0.783 - - - - - - - -
31. BX321921.1 BX321921.1 525 0.781 - - - - - - 0.781 - -
32. pidd pidd 86 0.781 - - - - - - - 0.781 -
33. sp7 ENSDARG00000019516 266 0.778 0.778 - - - - - - - - Sp7 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040629-2]
34. st6galnac1.1 ENSDARG00000043814 95 0.777 - - - - - - 0.777 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
35. got2a ENSDARG00000041068, ENSDARG00000114282 693 0.771 0.771 - - - - - - - - glutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
36. and1 ENSDARG00000088514 37603 0.765 0.765 - - - - - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
37. atoh1b ENSDARG00000099564 494 0.765 - - - - - - - 0.765 - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
38. AMPD2 AMPD2 1723 0.764 - - - - - - 0.764 - -
39. rbks ENSDARG00000019877 126 0.76 0.760 - - - - - - - - ribokinase [Source:ZFIN;Acc:ZDB-GENE-040625-112]
40. CR318593.1 CR318593.1 290 0.758 - - - - - - 0.758 - -
41. CHCHD4 CHCHD4 185 0.758 0.758 - - - - - - - -
42. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.757 0.757 - - - - - - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
43. csde1 ENSDARG00000074758 172 0.757 - - - - - - 0.757 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
44. WARS ENSDARG00000100954 309 0.756 - - - - - - 0.756 - - tryptophanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1742]
45. cwc27 ENSDARG00000043727 690 0.755 0.755 - - - - - - - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
46. rad21a_1 ENSDARG00000006092 4482 0.753 0.753 - - - - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
47. DENND6A DENND6A 648 0.753 - - - - - - 0.753 - -
48. ppm1e ENSDARG00000026499 770 0.747 0.747 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
49. SORCS2 ENSDARG00000077465 185 0.746 - - - - - - 0.746 - - sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
50. CEP152 ENSDARG00000075725 391 0.745 0.745 - - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
51. CR383676.3 CR383676.3 2650 0.745 - - - - - - 0.745 - -
52. si:dkey-61l1.4 ENSDARG00000092567 1012 0.745 0.745 - - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
53. brms1 ENSDARG00000051955 900 0.745 - - - - - - 0.745 - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
54. znf750 ENSDARG00000102267 327 0.743 0.743 - - - - - - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
55. pif1 ENSDARG00000020289 216 0.741 - - - - - - 0.741 - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
56. acad11 ENSDARG00000045411 350 0.739 0.739 - - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
57. ap1m1 ENSDARG00000096249 227 0.739 0.739 - - - - - - - - adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
58. rbm34 ENSDARG00000101877 1573 0.737 - - - - - - 0.737 - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
59. slc35b2 ENSDARG00000007886 310 0.735 - - - - - - 0.735 - - solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 [Source:ZFIN;Acc:ZDB-GENE-050213-1]
60. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.735 - - - - - - - 0.735 - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
61. ttc3 ENSDARG00000086075 2157 0.734 0.734 - - - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
62. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.733 0.733 - - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
63. sephs1 ENSDARG00000058292 3347 0.733 - - - - - - 0.733 - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
64. AKAP13_1 ENSDARG00000079994 444 0.732 0.732 - - - - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
65. hmgcrb ENSDARG00000105206 2080 0.732 - - - - - - 0.732 - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
66. chaf1b ENSDARG00000056473 880 0.732 0.732 - - - - - - - - chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
67. BX323045.3 BX323045.3 1044 0.731 0.731 - - - - - - - -
68. MON1B_1 MON1B_1 697 0.73 0.730 - - - - - - - -
69. hivep1 ENSDARG00000103658 345 0.73 0.730 - - - - - - - - human immunodeficiency virus type I enhancer binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512]
70. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 0.73 - - - - - - - 0.730 - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
71. GIN1 GIN1 317 0.729 - - - - - - - 0.729 -
72. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 0.729 - - - - - - - 0.729 - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
73. gpr107 ENSDARG00000103200 238 0.728 - - - - - - 0.728 - - G protein-coupled receptor 107 [Source:ZFIN;Acc:ZDB-GENE-061103-130]
74. syngr2a ENSDARG00000052429 3431 0.726 0.726 - - - - - - - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
75. FAAH ENSDARG00000077764 292 0.725 - - - - - - 0.725 - - fatty acid amide hydrolase [Source:ZFIN;Acc:ZDB-GENE-070619-3]
76. LRRC8E LRRC8E 495 0.725 0.725 - - - - - - - -
77. FP236789.2 FP236789.2 335 0.724 - - - - - - 0.724 - -
78. cplx3b ENSDARG00000089486 315 0.723 - - - - - - 0.723 - - complexin 3b [Source:ZFIN;Acc:ZDB-GENE-091204-403]
79. cyb561d2 ENSDARG00000044114 249 0.723 0.723 - - - - - - - - cytochrome b561 family, member D2 [Source:ZFIN;Acc:ZDB-GENE-041010-205]
80. lrata ENSDARG00000037278, ENSDARG00000112503 1510 0.722 0.722 - - - - - - - - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
81. gc3 31 0.722 - - - - - - - 0.722 - guanylyl cyclase 3, transcript variant X2
82. cxcr4a ENSDARG00000057633 1829 0.721 0.721 - - - - - - - - chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
83. CABZ01072511.1 CABZ01072511.1 88 0.721 - - - - - - 0.721 - -
84. TMEM221 TMEM221 62 0.721 - - - - - - 0.721 - -
85. dkk3b ENSDARG00000070683 209 0.721 - - - - - - 0.721 - - dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
86. si:dkey-262g12.3 ENSDARG00000094612 41 0.72 0.720 - - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
87. ccdc85al ENSDARG00000005343 25 0.719 - - - - - - - 0.719 - coiled-coil domain containing 85A, like [Source:ZFIN;Acc:ZDB-GENE-040912-92]
88. clpp ENSDARG00000020679 2125 0.717 - - - - - - 0.717 - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
89. BX927130.1 ENSDARG00000099328 7 0.716 0.716 - - - - - - - - si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
90. ptpn11a ENSDARG00000020334 1457 0.715 - - - - - - 0.715 - - protein tyrosine phosphatase, non-receptor type 11, a [Source:ZFIN;Acc:ZDB-GENE-030131-5911]
91. si:dkey-27n6.9 51 0.714 0.714 - - - - - - - - si:dkey-27n6.9, transcript variant X4
92. oat ENSDARG00000078425 657 0.713 - - - - - - 0.713 - - ornithine aminotransferase [Source:ZFIN;Acc:ZDB-GENE-110411-148]
93. sp3a ENSDARG00000001549 1994 0.713 0.713 - - - - - - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
94. h1m ENSDARG00000102892 319 0.712 0.712 - - - - - - - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
95. nob1 ENSDARG00000016080 2483 0.712 - - - - - - 0.712 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
96. CT990569.2 CT990569.2 531 0.71 0.710 - - - - - - - -
97. creg2 ENSDARG00000000666 643 0.71 - - - - - - 0.710 - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
98. RHOBTB1 ENSDARG00000079468 189 0.71 - - - - - - - 0.710 - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
99. coro2a ENSDARG00000005210 1479 0.709 0.709 - - - - - - - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
100. hs6st2 ENSDARG00000012025 1145 0.709 0.709 - - - - - - - - heparan sulfate 6-O-sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-14]

There are 18 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA