Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snd1

Gene Name Gene ID Reads Annotation
snd1 ENSDARG00000006766 12906 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]










Genes with expression patterns similar to snd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snd1 ENSDARG00000006766 12906 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
2. capns1a ENSDARG00000035329 10870 2.484 - 0.852 - - - - - 0.840 0.792 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
3. tpd52l2b ENSDARG00000013655 9460 2.477 - - - - - 0.765 - 0.809 0.903 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
4. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 14357 2.368 0.706 0.745 - 0.917 - - - - - cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
5. fbxo28 ENSDARG00000027159 9602 2.361 0.763 - - - - 0.745 - 0.853 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
6. FP102272.1 FP102272.1 9473 1.929 - - - - - - 0.995 0.934 -
7. cmip ENSDARG00000062933 4521 1.914 - - - - - - 0.994 - 0.920 c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
8. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.861 - - - 0.957 - - - - 0.904 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
9. gli2b ENSDARG00000020884 1468 1.855 - - - 0.955 - - - - 0.900 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
10. tubb4b ENSDARG00000002344 30333 1.826 - - - 0.836 - - 0.990 - - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
11. rnaseka ENSDARG00000069461 10304 1.816 - 0.822 - - - - 0.994 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
12. zfand5b ENSDARG00000002271 4145 1.808 - - - 0.955 - - - - 0.853 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
13. lamc1 ENSDARG00000036279 11025 1.807 - - - - - 0.811 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
14. ndufa7 ENSDARG00000036684 6051 1.806 - - 0.814 - - - 0.992 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
15. slc1a5 ENSDARG00000099186 7580 1.799 - - - 0.958 - - - - 0.841 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
16. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 1.796 0.801 - - - - - 0.995 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
17. lgals3l lgals3l 3833 1.791 - - 0.794 - - - 0.997 - -
18. gnpda2 ENSDARG00000024443 6637 1.776 - 0.830 - 0.946 - - - - - glucosamine-6-phosphate deaminase 2 [Source:ZFIN;Acc:ZDB-GENE-091117-41]
19. mat2aa ENSDARG00000040334 10769 1.775 - 0.779 - - - - 0.996 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
20. commd4 ENSDARG00000061946 3281 1.767 - - - - - - - 0.886 0.881 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
21. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.763 - - - - - - - 0.866 0.897 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
22. frmd6 ENSDARG00000002332 2698 1.754 - - - - - - - 0.888 0.866 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
23. calrl calrl 16799 1.741 - - - 0.893 - 0.848 - - -
24. rab5aa ENSDARG00000018602 8947 1.736 - - - - - 0.741 0.995 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
25. C18H12orf23 C18H12orf23 5362 1.736 - - 0.816 - - - - - 0.920
26. suclg1 ENSDARG00000052712 17570 1.721 0.733 - - - - - 0.988 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
27. nqo1 ENSDARG00000010250 6430 1.715 0.739 - - - - - 0.976 - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
28. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.707 - - 0.856 - - - - 0.851 - AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
29. TNRC6A ENSDARG00000079688 14433 1.705 - - - 0.916 - 0.789 - - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
30. pdcd4a ENSDARG00000021702 7293 1.703 - - - - - - - 0.803 0.900 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
31. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.684 - - - - - 0.815 - 0.869 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
32. chmp2bb ENSDARG00000002190 4629 1.679 - 0.717 - 0.962 - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
33. sra1 ENSDARG00000053619 2799 1.675 - - - - - - - 0.800 0.875 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
34. sepw1 17630 1.669 - - - 0.922 - - - - 0.747 selenoprotein W, 1
35. lepre1 lepre1 5346 1.663 - - 0.760 - - - - - 0.903
36. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 1.659 - - 0.781 - - - - - 0.878 tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
37. capza1a ENSDARG00000034240 24012 1.649 0.859 - - - - - - 0.790 - capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
38. bambib ENSDARG00000099677 4267 1.644 - - 0.780 - - - - 0.864 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
39. cyfip1 ENSDARG00000044345 5483 1.636 - - - - - 0.711 - - 0.925 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
40. atp6v1f ENSDARG00000045543 3445 1.632 - - - - - 0.708 - - 0.924 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
41. abracl ENSDARG00000042876 10208 1.63 - - - - - - - 0.740 0.890 ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
42. ppdpfa ENSDARG00000007682 3214 1.625 - - - - - 0.743 - 0.882 - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
43. tax1bp1b ENSDARG00000056856 4526 1.625 - - 0.825 - - 0.800 - - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
44. cbx5 ENSDARG00000061187 24026 1.621 - - - - - 0.779 - 0.842 - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
45. BRK1 ENSDARG00000041974 6430 1.62 0.763 - - - - - - - 0.857 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
46. npc2 ENSDARG00000090912 21929 1.613 - - - 0.792 - - 0.821 - - Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
47. ube2h ENSDARG00000000019 9900 1.61 - 0.764 - - - - - - 0.846 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
48. acaa2 ENSDARG00000038881 2649 1.607 - - - - - 0.736 - 0.871 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
49. arpc4l ENSDARG00000058225 10107 1.593 - - 0.794 - - - - - 0.799 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
50. ywhah ENSDARG00000005560 11079 1.585 - - 0.732 - - - - - 0.853 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
51. epn2 ENSDARG00000008377 5458 1.578 - 0.751 0.827 - - - - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
52. arglu1a ENSDARG00000019223 8716 1.573 0.726 - - - - - - 0.847 - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
53. cnn2 ENSDARG00000035858 18201 1.556 - - - - - 0.787 - 0.769 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
54. lasp1 ENSDARG00000057867 18721 1.553 0.745 - 0.808 - - - - - - LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
55. ddost ENSDARG00000037318 10904 1.55 - - - - - - - 0.764 0.786 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
56. exosc1 ENSDARG00000059841 6895 1.549 - - - - - 0.722 - - 0.827 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
57. si:ch73-110p20.1 5932 1.545 - - - - - - - 0.823 0.722 si:ch73-110p20.1
58. cant1a ENSDARG00000012192 1324 1.545 - - 0.748 - - - - 0.797 - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
59. sec61b ENSDARG00000076568 11859 1.544 - - - - 0.706 0.838 - - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
60. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.543 - 0.818 - - 0.725 - - - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
61. nucb2a ENSDARG00000036299, ENSDARG00000112218 10499 1.54 - - - - 0.704 0.836 - - - nucleobindin 2a [Source:ZFIN;Acc:ZDB-GENE-030826-14]
62. rab1a rab1a 14138 1.534 - - 0.765 - - - - - 0.769
63. atp6v1e1b ENSDARG00000030694 5452 1.53 - 0.827 - - - 0.703 - - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
64. NID1 NID1 6192 1.513 - 0.704 0.809 - - - - - -
65. pkp3 pkp3 9767 1.51 0.734 0.776 - - - - - - -
66. rac2 ENSDARG00000038010 5837 1.503 - - 0.785 - - - - 0.718 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
67. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.497 - - - - - 0.749 - 0.748 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
68. pfn2 ENSDARG00000003952 26209 1.487 - 0.765 - - - - - - 0.722 profilin 2 [Source:ZFIN;Acc:ZDB-GENE-040115-4]
69. CABZ01092303.1 CABZ01092303.1 8825 1.475 - - - - - 0.755 - 0.720 -
70. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 41521 1.473 - - - - - 0.770 0.703 - - ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
71. serpinh1a ENSDARG00000075954 6488 1.463 - - - - - 0.709 - - 0.754 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
72. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.46 - - - - - - - 0.758 0.702 ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
73. sec24d ENSDARG00000045946 2395 1.448 - 0.712 - - - 0.736 - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
74. atp6ap2 ENSDARG00000008735 5096 1.425 0.712 - - - - 0.713 - - - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
75. prpf8 ENSDARG00000026180 7026 1.423 - - - - - 0.719 - - 0.704 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
76. rab1ba ENSDARG00000058044 5080 0.995 - - - - - - 0.995 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
77. BX548078.1 ENSDARG00000093780 1325 0.995 - - - - - - 0.995 - -
78. ENSDARG00000070355 ENSDARG00000070355 8316 0.995 - - - - - - 0.995 - -
79. slc16a12b ENSDARG00000089885 3744 0.995 - - - - - - 0.995 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
80. zgc:101000 zgc:101000 9041 0.994 - - - - - - 0.994 - -
81. psmd6 ENSDARG00000070674 4675 0.994 - - - - - - 0.994 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
82. cx43.4 ENSDARG00000007099 16369 0.994 - - - - - - 0.994 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
83. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.994 - - - - - - 0.994 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
84. sh3gl3a ENSDARG00000013360 3602 0.994 - - - - - - 0.994 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
85. eif3c ENSDARG00000016443 18003 0.993 - - - - - - 0.993 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
86. chd2 ENSDARG00000060687 3832 0.993 - - - - - - 0.993 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
87. vamp3 ENSDARG00000070161 6396 0.993 - - - - - - 0.993 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
88. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.993 - - - - - - 0.993 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
89. qkia ENSDARG00000097478 18572 0.993 - - - - - - 0.993 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
90. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.993 - - - - - - 0.993 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
91. stx12 ENSDARG00000098813 2576 0.993 - - - - - - 0.993 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
92. serpine2 ENSDARG00000029353 2274 0.993 - - - - - - 0.993 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
93. PCDH9 ENSDARG00000063264 1309 0.992 - - - - - - 0.992 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
94. loxl2a ENSDARG00000044010 1906 0.992 - - - - - - 0.992 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
95. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.992 - - - - - - 0.992 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
96. bin2a ENSDARG00000003219 1369 0.992 - - - - - - 0.992 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
97. oaz1a ENSDARG00000071403 21112 0.992 - - - - - - 0.992 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
98. efcab7 ENSDARG00000020279 1030 0.992 - - - - - - 0.992 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
99. cep97 ENSDARG00000102407 1154 0.992 - - - - - - 0.992 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
100. EIF4G1_1 EIF4G1_1 3721 0.992 - - - - - - 0.992 - -

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA