Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sncgb

Gene Name Gene ID Reads Annotation
sncgb ENSDARG00000109715 1014 synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]










Genes with expression patterns similar to sncgb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sncgb ENSDARG00000109715 1014 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
2. SEMA7A ENSDARG00000078707 465 3.336 0.705 - - - - 0.948 0.950 0.733 - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
3. slc1a1 ENSDARG00000020212 104 3.313 0.847 - - - - 0.762 0.889 0.815 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
4. slc8a2b ENSDARG00000100592 598 3.251 0.768 0.797 - - - 0.734 0.952 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
5. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.838 0.867 - - - - 0.984 0.987 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
6. TUBB8P7_1 TUBB8P7_1 2722 2.827 0.904 - - - - 0.983 0.940 - -
7. olfm1b ENSDARG00000014053 1392 2.824 0.916 - - - - 0.960 0.948 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
8. pcsk1nl ENSDARG00000076170 1232 2.815 0.931 - - - - 0.945 0.939 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
9. MAP1A MAP1A 847 2.814 0.880 - - - - 0.973 0.961 - -
10. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.781 0.937 - - - - 0.883 0.961 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
11. stx1b ENSDARG00000000503 2724 2.779 0.846 - - - - 0.957 0.976 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
12. syt11a ENSDARG00000057913 1145 2.773 0.939 - - - - 0.955 0.879 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
13. necap1 ENSDARG00000020798 612 2.771 - 0.900 - - - 0.948 0.923 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
14. scn8aa ENSDARG00000005775 792 2.766 0.894 - - - - 0.955 0.917 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
15. tuba1c ENSDARG00000055216 8384 2.75 0.807 - - - - 0.977 0.966 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
16. stmn2a ENSDARG00000033234 2272 2.748 0.825 - - - - 0.969 0.954 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
17. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.745 0.826 - - - - 0.943 0.976 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
18. BX957337.1 BX957337.1 1685 2.744 0.809 - - - - 0.976 0.959 - -
19. INA INA 950 2.743 0.835 - - - - 0.938 0.970 - -
20. mllt11 ENSDARG00000071026 2518 2.739 0.903 - - - - 0.981 0.855 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
21. snap25a ENSDARG00000020609 4537 2.736 0.799 - - - - 0.980 0.957 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
22. rab3ab ENSDARG00000043835 1267 2.731 0.786 - - - - 0.976 0.969 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
23. nadl1.1 1200 2.724 0.908 - - - - 0.888 0.928 - - neural adhesion molecule L1.1, transcript variant X1
24. atp6v0cb ENSDARG00000036577 3472 2.722 0.863 - - - - 0.937 0.922 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
25. pax6a ENSDARG00000103379 3061 2.714 0.830 - - - - 0.914 0.970 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
26. fez1 ENSDARG00000023174 701 2.712 0.908 - - - - 0.933 0.871 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
27. stmn2b ENSDARG00000070537 1586 2.71 0.920 - - - - 0.968 0.822 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
28. cadm3 ENSDARG00000057013 1545 2.708 0.735 - - - - 0.984 0.989 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
29. SPOCK1 ENSDARG00000074644 794 2.694 0.924 - - - - 0.858 0.912 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
30. gfap ENSDARG00000025301 5584 2.694 0.777 - - - - 0.955 0.962 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
31. slc1a2b ENSDARG00000102453 3136 2.686 0.785 - - - - 0.965 0.936 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
32. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.682 0.937 - - - - 0.875 0.870 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
33. scg2b ENSDARG00000038574 345 2.677 0.875 - - - - 0.956 0.846 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
34. ndrg4 ENSDARG00000103937 1234 2.673 0.797 - - - - 0.932 0.944 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
35. SV2B SV2B 208 2.67 0.728 - - - - 0.957 0.985 - -
36. sh3gl2 sh3gl2 1305 2.665 0.738 - - - - 0.970 0.957 - -
37. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.662 0.765 - - - - 0.967 0.930 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
38. eno2 ENSDARG00000014287 2162 2.661 0.874 - - - - 0.929 0.858 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
39. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.653 0.865 - - - - 0.901 0.887 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
40. amph ENSDARG00000007663 599 2.649 0.759 - - - - 0.942 0.948 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
41. kcnc3a ENSDARG00000055855 1821 2.645 0.717 - - - - 0.954 0.974 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
42. SKOR2 SKOR2 1041 2.644 0.901 - - - - 0.778 0.965 - -
43. gap43 ENSDARG00000099744 4114 2.643 0.773 - - - - 0.965 0.905 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
44. nrn1a ENSDARG00000071860 1311 2.64 0.814 - - - - 0.974 0.852 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
45. cadm1b ENSDARG00000042677 277 2.639 - 0.831 - - - 0.894 0.914 - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
46. stmn1b ENSDARG00000033655 9491 2.638 0.769 - - - - 0.948 0.921 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
47. st6gal1 ENSDARG00000044514 142 2.638 0.956 - - - - 0.836 0.846 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
48. prrt1 ENSDARG00000062208 368 2.637 0.872 - - - - 0.859 0.906 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
49. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.637 0.824 - - - - 0.850 0.963 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
50. nkx1.2lb ENSDARG00000099427 220 2.632 0.787 - - - - 0.869 0.976 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
51. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.632 0.709 - - - - 0.978 0.945 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
52. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.631 0.703 - - - - 0.950 0.978 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
53. cdk5r1b ENSDARG00000045087 2075 2.622 0.746 - - - - 0.897 0.979 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
54. rtn1b ENSDARG00000021143 1682 2.619 0.851 - - - - 0.971 0.797 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
55. LINGO2 LINGO2 300 2.619 - - - - - 0.860 0.935 0.824 -
56. TUBB2A TUBB2A 142 2.617 0.875 - - - - 0.933 0.809 - -
57. MAPK8IP1_1 MAPK8IP1_1 186 2.615 0.783 - - - - 0.896 0.936 - -
58. TUBB8P7_2 TUBB8P7_2 565 2.613 0.909 - - - - 0.713 0.991 - -
59. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.613 0.831 - - - - 0.923 0.859 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
60. myt1b ENSDARG00000102879 5411 2.612 0.819 - - - - 0.929 0.864 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
61. dbx2 2971 2.611 0.914 - - - - 0.729 0.968 - - developing brain homeobox 2
62. lhx1a ENSDARG00000014018 958 2.61 0.771 - - - - 0.863 0.976 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
63. cnrip1a ENSDARG00000091683 1491 2.608 0.792 - - - - 0.895 0.921 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
64. ADAM22 ENSDARG00000060532 2259 2.606 - 0.818 - - - 0.911 0.877 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
65. si:ch73-21g5.7 ENSDARG00000093156 9412 2.605 0.782 - - - - 0.904 0.919 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
66. CR847998.1 ENSDARG00000104784 518 2.6 - - - - - 0.891 0.959 0.750 -
67. nbeaa ENSDARG00000070080 862 2.595 0.837 - - - - 0.824 0.934 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
68. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.593 0.772 - - - - 0.943 0.878 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
69. pou4f1 ENSDARG00000005559 821 2.592 0.756 - - - - 0.860 0.976 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
70. pcdh1gc5 ENSDARG00000104826 10052 2.591 0.703 - - - - 0.982 0.906 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
71. ppp3ca ENSDARG00000004988 615 2.591 0.768 - - - - 0.909 0.914 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
72. spock2 ENSDARG00000075393 791 2.583 0.731 - - - - 0.964 0.888 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
73. hoxc4a ENSDARG00000070338 1382 2.581 0.760 - - - - 0.965 0.856 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
74. CLIP3 ENSDARG00000054456 734 2.581 0.897 - - - - 0.827 0.857 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
75. dpysl3 ENSDARG00000002587 4381 2.58 0.736 - - - - 0.900 0.944 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
76. plp1a ENSDARG00000103732 3544 2.58 0.768 - - - - 0.924 0.888 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
77. epha4b ENSDARG00000011600 3110 2.577 0.792 - - - - 0.861 0.924 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
78. nefmb ENSDARG00000043697 2052 2.576 0.920 - - - - 0.788 0.868 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
79. gsx1 ENSDARG00000035735 1243 2.567 0.729 - - - - 0.895 0.943 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
80. TUBA1A ENSDARG00000001889 25294 2.565 0.731 - - - - 0.941 0.893 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
81. snap25b ENSDARG00000058117 469 2.562 0.811 - - - - 0.877 0.874 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
82. tmem229b ENSDARG00000060569 516 2.556 0.854 0.824 - - - - 0.878 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
83. STMN3 ENSDARG00000038465 1009 2.554 0.739 - - - - 0.853 0.962 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
84. nxph1 ENSDARG00000033447 182 2.554 0.782 - - - - 0.824 0.948 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
85. map7d2a ENSDARG00000068480 513 2.554 0.859 - - - - 0.815 0.880 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
86. slc18a3a ENSDARG00000006356 1285 2.553 0.754 - - - - 0.871 0.928 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
87. rusc1 ENSDARG00000078125 617 2.552 0.841 - - - - 0.877 0.834 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
88. pcsk1 ENSDARG00000002600 404 2.552 - - - - - 0.921 0.833 0.798 - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
89. nrxn2a ENSDARG00000061454 291 2.548 0.861 - - - - 0.824 0.863 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
90. C7H4orf48 C7H4orf48 1455 2.547 0.748 - - - - 0.980 0.819 - -
91. calb1 ENSDARG00000031598 252 2.542 0.889 - - - - 0.898 0.755 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
92. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.537 0.740 - - - - 0.865 0.932 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
93. ckbb ENSDARG00000043257 3503 2.535 0.763 - - - - 0.918 0.854 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
94. mdkb ENSDARG00000020708 5393 2.531 0.752 - - - - 0.955 0.824 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
95. pax3a ENSDARG00000010192 626 2.529 - - - - - 0.960 0.836 0.733 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
96. add2 ENSDARG00000074581 1402 2.529 0.811 - - - - 0.908 0.810 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
97. EFCC1 ENSDARG00000077826 1359 2.529 0.811 - - - - 0.851 0.867 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
98. scn2b ENSDARG00000101713 796 2.528 0.865 - - - - 0.713 0.950 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
99. tox ENSDARG00000032317 9126 2.523 0.751 - - - - 0.860 0.912 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
100. adarb1a ENSDARG00000041609 476 2.516 0.727 - - - - 0.858 0.931 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]

There are 2303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA