Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sncga

Gene Name Gene ID Reads Annotation
sncga ENSDARG00000034423, ENSDARG00000112260 5469 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]










Genes with expression patterns similar to sncga

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sncga ENSDARG00000034423, ENSDARG00000112260 5469 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
2. CABZ01079764.1 CABZ01079764.1 12103 4.534 - 0.963 - 0.833 0.768 0.973 0.997 - -
3. tnnt2d ENSDARG00000002988 7590 4.014 - 0.795 0.824 - - - 0.848 0.726 0.821 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
4. tnnc1b ENSDARG00000037539 13945 3.778 - 0.703 - 0.737 0.709 - 0.806 - 0.823 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
5. sptb ENSDARG00000030490 7128 3.732 - 0.772 - - - 0.810 0.746 0.702 0.702 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
6. srl ENSDARG00000104587 11126 3.706 - 0.729 - 0.735 0.778 - 0.733 0.731 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
7. si:dkeyp-118a3.2 ENSDARG00000086957 2106 3.638 - 0.925 - 0.804 - 0.954 0.955 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
8. epyc ENSDARG00000056950 7783 3.435 - 0.854 - - - 0.868 0.953 - 0.760 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
9. klhl31 ENSDARG00000039066 13656 3.127 - - - 0.845 0.703 - - 0.731 0.848 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
10. nexn ENSDARG00000057317 10972 3.059 - - - 0.845 - - 0.704 0.715 0.795 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
11. smyd2b ENSDARG00000005629 8181 3.046 - 0.760 - 0.775 0.753 - - - 0.758 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
12. nmrk2 ENSDARG00000067848 10293 3.026 - 0.836 - - 0.711 - 0.720 0.759 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
13. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.984 - 0.794 - - - 0.714 - 0.704 0.772 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
14. AIMP1 ENSDARG00000060036 4136 2.944 - 0.728 - 0.790 - - - 0.712 0.714 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
15. ptrfa ptrfa 4363 2.943 - 0.755 - - 0.715 0.758 - - 0.715
16. tpma ENSDARG00000033683 752432 2.886 - - 0.718 0.735 0.702 - - 0.731 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
17. CR847510.1 CR847510.1 629 2.8 - 0.893 - - - 0.977 0.930 - -
18. col9a3 ENSDARG00000037845 6564 2.678 - 0.876 - - - 0.895 0.907 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
19. COBLL1_1 COBLL1_1 787 2.676 - 0.808 - - - 0.937 0.931 - -
20. CU972452.1 CU972452.1 1046 2.669 - 0.779 - - - 0.989 0.901 - -
21. BX842614.2 BX842614.2 799 2.661 - - - - - 0.945 0.949 - 0.767
22. plcl1 ENSDARG00000067676 2457 2.649 - 0.824 - - - 0.943 0.882 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
23. ntla ntla 926 2.597 - 0.738 - - - 0.904 0.955 - -
24. SLC3A2_1 SLC3A2_1 358 2.567 - 0.832 - - - 0.926 0.809 - -
25. tspan7b ENSDARG00000008407 5740 2.566 - 0.898 - - - 0.780 0.888 - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
26. fam46bb 601 2.564 - 0.735 - - - 0.975 0.854 - - family with sequence similarity 46, member Bb
27. tppp3 ENSDARG00000030463 992 2.555 - 0.770 - - - 0.860 0.925 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
28. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.534 - 0.979 - - - 0.770 - - 0.785
29. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 2.51 - 0.890 - - - 0.849 0.771 - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
30. ntd5 ENSDARG00000040944 4988 2.461 - 0.717 - - - 0.865 0.879 - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
31. cav3 ENSDARG00000024141 14906 2.437 - - - 0.815 0.786 - 0.836 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
32. COLGALT2 ENSDARG00000014670 63 2.435 - 0.821 - - - 0.891 0.723 - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
33. matn3b ENSDARG00000069265 856 2.429 - 0.810 - - - 0.815 0.804 - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
34. prx ENSDARG00000017246 6183 2.427 - 0.925 - - 0.738 - - - 0.764 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
35. SYNPO2 SYNPO2 7382 2.401 - - - 0.801 - 0.766 - - 0.834
36. casq1b ENSDARG00000018105 2643 2.382 - 0.844 0.778 - - - - - 0.760 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
37. plod2 ENSDARG00000011821 1656 2.38 - 0.771 - - - 0.760 0.849 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
38. rp42-pen rp42-pen 3395 2.373 - 0.804 - 0.807 - - - - 0.762
39. tgfbi ENSDARG00000071586 17779 2.371 0.750 - - - - 0.841 0.780 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
40. tmem38a ENSDARG00000024047 41883 2.342 - - - 0.823 0.748 - - 0.771 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
41. ism1 ENSDARG00000020541 1241 2.341 - 0.743 - - - 0.764 0.834 - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
42. C13H10orf71 3489 2.321 - 0.796 - - - - 0.786 - 0.739 chromosome 13 C10orf71 homolog
43. smtnl1 ENSDARG00000041257 7410 2.314 - - - 0.785 - - 0.736 - 0.793 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
44. klhl41b ENSDARG00000006757 10762 2.302 - - - 0.751 - - - 0.772 0.779 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
45. myhz2 ENSDARG00000012944 69921 2.301 - - - 0.748 - 0.749 0.804 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
46. shha ENSDARG00000068567, ENSDARG00000111447 1497 2.263 - 0.761 - - - 0.796 0.706 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
47. pvalb4 ENSDARG00000024433 35736 2.259 - - - 0.714 - - 0.806 0.739 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
48. myhc4 ENSDARG00000035438 1322 2.25 - 0.752 - - - 0.760 0.738 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
49. mybpc3 ENSDARG00000011615 7271 2.248 - 0.713 0.741 - - - - - 0.794 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
50. PTPLA PTPLA 4044 2.243 - 0.728 - 0.775 - - - - 0.740
51. pmp22b ENSDARG00000060457 20406 2.232 - - - - 0.730 - 0.734 0.768 - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
52. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.23 - - 0.756 - - - 0.765 - 0.709 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
53. actn3b ENSDARG00000001431 15747 2.225 - 0.755 0.731 0.739 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
54. tnnt3a ENSDARG00000030270 112506 2.223 - - 0.720 - 0.711 - - - 0.792 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
55. smpx ENSDARG00000045302 2175 2.213 - - - 0.743 - - 0.734 - 0.736 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
56. trdn ENSDARG00000041779 4283 2.209 - 0.736 - - - - 0.727 - 0.746 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
57. txnipb ENSDARG00000070000 2365 2.205 - 0.704 - 0.710 - - 0.791 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
58. ntmt1 ENSDARG00000022399 5779 2.2 - 0.776 - 0.719 - - - - 0.705 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
59. tgm1l1 ENSDARG00000102106 1437 2.196 - 0.777 - - - - 0.710 - 0.709 transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
60. tgm2a ENSDARG00000070157 4516 2.189 - - 0.739 0.718 - - 0.732 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
61. aldoab ENSDARG00000034470 88942 2.165 - - - 0.722 0.713 - - 0.730 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
62. mybphb ENSDARG00000003081 5208 2.154 - 0.743 - - - - 0.702 - 0.709 myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
63. CR847973.1 ENSDARG00000115516 8754 2.151 - 0.729 - - - - 0.714 - 0.708
64. ttnb ttnb 73721 2.145 - - - 0.717 0.710 0.718 - - -
65. zgc:86725 2559 2.145 - - - - - 0.702 0.723 - 0.720 zgc:86725
66. chad ENSDARG00000045071 903 1.887 - - - - - 0.912 0.975 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
67. si:dkeyp-12a9.5 3058 1.873 - - - - - 0.934 0.939 - - si:dkeyp-12a9.5
68. PAQR4 PAQR4 2150 1.868 - - - - - 0.901 0.967 - -
69. CU302436.1 ENSDARG00000114500 1619 1.862 - 0.914 - - - - 0.948 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
70. CABZ01044297.1 CABZ01044297.1 2015 1.836 - - - - - 0.908 0.928 - -
71. eng1a eng1a 484 1.829 - - - - - 0.865 0.964 - -
72. zgc:194470 zgc:194470 210 1.827 - 0.862 - - - 0.965 - - -
73. aqp8b_1 ENSDARG00000089749 586 1.784 - 0.880 - - - 0.904 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
74. ltbp3 325 1.779 - 0.849 - - - - 0.930 - - latent transforming growth factor beta binding protein 3, transcript variant X3
75. acana ENSDARG00000035891 118 1.769 - - - - - 0.828 0.941 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
76. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.765 - - - - - 0.902 0.863 - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
77. susd5 ENSDARG00000088277 439 1.739 - - - - - 0.807 0.932 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
78. golim4b ENSDARG00000014545 628 1.737 - - - - - 0.826 0.911 - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
79. notum2 ENSDARG00000088411 823 1.736 - 0.772 - - - - 0.964 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
80. pi15a ENSDARG00000045378 2361 1.735 - - - - - 0.919 0.816 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
81. aqp8b ENSDARG00000089749 108 1.731 - 0.907 - - - 0.824 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
82. GALNT16 ENSDARG00000053190 250 1.722 - 0.816 - - - - 0.906 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
83. IGSF10 ENSDARG00000077497 317 1.714 - - - - - 0.773 0.941 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
84. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.684 - 0.920 - - - - 0.764 - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
85. col27a1a 1747 1.683 - - - - - 0.837 0.846 - - collagen, type XXVII, alpha 1a
86. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.664 - 0.894 - - - 0.770 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
87. sgcb ENSDARG00000052341 4168 1.662 - 0.808 - - - - - - 0.854 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
88. tnni1al 8272 1.659 - - - - - - - 0.820 0.839 troponin I, skeletal, slow like, transcript variant X1
89. col11a2 ENSDARG00000012422 3204 1.654 - 0.720 - - - - 0.934 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
90. syngr3b ENSDARG00000025034 290 1.648 - 0.935 - - - - 0.713 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
91. ak1 ENSDARG00000001950 26964 1.648 - - - 0.873 0.775 - - - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
92. pitx3 ENSDARG00000070069 363 1.647 - - - - - 0.830 0.817 - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
93. tgfb3 ENSDARG00000019367 2327 1.643 - - - - - 0.815 0.828 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
94. CABZ01074309.1 CABZ01074309.1 121 1.625 - 0.819 - - - - 0.806 - -
95. CU928220.1 CU928220.1 146 1.623 - - - - - 0.789 0.834 - -
96. CABZ01086825.1 CABZ01086825.1 573 1.622 - 0.854 - - - - 0.768 - -
97. lgals1l1 ENSDARG00000088711 4515 1.619 - 0.773 - - - - 0.846 - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
98. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.612 0.858 - - - - - - - 0.754 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
99. vcl vcl 6667 1.61 - 0.767 - - - - - - 0.843
100. tnnt3b ENSDARG00000068457 101827 1.603 - 0.868 0.735 - - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]

There are 953 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA