Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sncb

Gene Name Gene ID Reads Annotation
sncb ENSDARG00000104945 8197 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]










Genes with expression patterns similar to sncb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sncb ENSDARG00000104945 8197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
2. myt1b ENSDARG00000102879 5411 3.275 0.730 0.807 0.783 - - 0.955 - - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
3. pcdh1gc5 ENSDARG00000104826 10052 3.241 0.790 0.714 - - - 0.975 - 0.762 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
4. lhx1a ENSDARG00000014018 958 3.21 0.836 0.732 0.720 - - 0.922 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
5. gap43 ENSDARG00000099744 4114 3.193 0.799 - 0.735 - - 0.954 - 0.705 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
6. slc1a2b ENSDARG00000102453 3136 3.157 0.719 0.742 - - - 0.975 - - 0.721 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
7. si:ch73-21g5.7 ENSDARG00000093156 9412 3.156 0.804 0.791 - - - 0.844 - 0.717 - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
8. atp1a3a ENSDARG00000018259 5393 3.122 0.741 - - - 0.738 0.941 - 0.702 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
9. dbx1a ENSDARG00000086393 3161 3.117 0.766 0.754 - - - 0.857 - 0.740 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
10. vdac1 ENSDARG00000045132 8051 3.066 0.722 - - 0.826 - 0.796 - 0.722 - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. nucks1a ENSDARG00000078473 28285 3.037 - - 0.720 0.832 - 0.768 - 0.717 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
12. inab ENSDARG00000053248 3239 2.662 0.701 - - - - 0.961 1.000 - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
13. mllt11 ENSDARG00000071026 2518 2.64 0.845 - - - - 0.987 - 0.808 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
14. si:dkey-235h8.1 si:dkey-235h8.1 2457 2.605 - - - - - 0.939 - 0.824 0.842
15. TUBB8P7_1 TUBB8P7_1 2722 2.598 0.789 - - - - 0.985 - - 0.824
16. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.59 0.879 0.809 - - - 0.902 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
17. nrarpb ENSDARG00000018958 6225 2.578 0.849 0.798 - - - 0.931 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
18. prmt1 ENSDARG00000010246 11311 2.578 - - - 0.915 - - - 0.746 0.917 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
19. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.554 0.881 - 0.740 - - 0.933 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
20. scrt2 ENSDARG00000056175 4331 2.536 0.784 0.773 - - - 0.979 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
21. nadl1.1 1200 2.534 0.769 0.804 - - - 0.961 - - - neural adhesion molecule L1.1, transcript variant X1
22. nova2 ENSDARG00000017673 7685 2.53 0.870 0.704 - - - 0.956 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
23. hdac1 ENSDARG00000015427 19804 2.522 0.763 - - - - 0.775 0.984 - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
24. nes ENSDARG00000088805 2710 2.513 0.899 0.750 - - - 0.864 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
25. dla ENSDARG00000010791 9281 2.508 0.822 0.717 - 0.969 - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
26. snap25a ENSDARG00000020609 4537 2.507 0.814 0.705 - - - 0.988 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
27. neurog1 ENSDARG00000056130 3924 2.504 0.822 0.837 - - - 0.845 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
28. stx1b ENSDARG00000000503 2724 2.493 0.771 0.745 - - - 0.977 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
29. her4.1 ENSDARG00000056732 1264 2.487 0.799 0.715 - - - 0.973 - - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
30. pax6a ENSDARG00000103379 3061 2.485 0.785 0.723 - - - 0.977 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
31. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.482 0.757 - - 0.988 - 0.737 - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
32. rbfox3 rbfox3 1443 2.478 0.804 0.725 - - - 0.949 - - -
33. ckbb ENSDARG00000043257 3503 2.467 0.763 - 0.737 - - 0.967 - - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
34. stmn1b ENSDARG00000033655 9491 2.466 0.855 - 0.732 - - 0.879 - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
35. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.464 0.779 - - - - 0.935 - 0.750 - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
36. MAP1A MAP1A 847 2.459 0.746 0.746 - - - 0.967 - - -
37. scn8aa ENSDARG00000005775 792 2.455 0.741 0.742 - - - 0.972 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
38. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.454 0.797 0.796 - - - 0.861 - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
39. slc18a3a ENSDARG00000006356 1285 2.452 0.706 0.820 - - - 0.926 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
40. EPB41L1 EPB41L1 1896 2.446 0.803 - 0.739 - - 0.904 - - -
41. amph ENSDARG00000007663 599 2.446 0.824 0.703 - - - 0.919 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
42. irx1b ENSDARG00000056594 2224 2.437 0.867 0.734 - - - 0.836 - - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
43. mdkb ENSDARG00000020708 5393 2.429 0.702 - - - - 0.889 - 0.838 - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
44. gng3 ENSDARG00000009553 2530 2.425 0.802 - - - - 0.851 - 0.772 - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
45. cspg5a ENSDARG00000069981 1699 2.42 0.798 - - - - 0.828 - 0.794 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
46. zgc:112425 zgc:112425 293873 2.414 - - - - - 0.743 0.889 0.782 -
47. dpysl5a ENSDARG00000011141 1827 2.408 0.754 - - - - 0.921 - 0.733 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
48. pcsk1nl ENSDARG00000076170 1232 2.4 0.742 0.745 - - - 0.913 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
49. tmem35 ENSDARG00000052567 5685 2.4 0.790 - - - - 0.853 - 0.757 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
50. wu:fb17g07 wu:fb17g07 10567 2.397 - 0.710 - 0.971 - 0.716 - - -
51. SYT2 ENSDARG00000014169 265 2.394 0.866 0.755 - - - 0.773 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
52. relnl relnl 863 2.392 - 0.705 0.714 - - 0.973 - - -
53. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.391 0.783 - - - - 0.868 - 0.740 - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
54. CHL1 CHL1 1553 2.39 0.782 0.734 - - - 0.874 - - -
55. zic1 ENSDARG00000015567 2520 2.386 0.783 0.748 - - - 0.855 - - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
56. syngr3a ENSDARG00000014871 405 2.38 0.856 0.705 - - - 0.819 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
57. si:dkey-25e11.10 si:dkey-25e11.10 955 2.374 0.726 0.740 - - - 0.908 - - -
58. rufy3 ENSDARG00000029692 3031 2.371 0.753 0.807 - - - 0.811 - - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
59. her2 ENSDARG00000038205 3219 2.37 0.912 - - - - 0.709 - 0.749 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
60. arnt2 ENSDARG00000103697 5731 2.369 - - 0.737 - - 0.853 - 0.779 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
61. dbx2 2971 2.348 0.770 0.752 - - - 0.826 - - - developing brain homeobox 2
62. fyna ENSDARG00000011370 1679 2.346 0.798 - - - - 0.816 - 0.732 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
63. gnao1a ENSDARG00000016676 8184 2.333 0.757 - 0.774 - - - - 0.802 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
64. zgc:100906 ENSDARG00000033599 344 2.33 0.793 0.780 - - - 0.757 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
65. hnrnpab hnrnpab 72354 2.328 0.769 - - - - 0.854 - 0.705 -
66. ptprnb ENSDARG00000077047 2743 2.323 0.804 0.747 - - - 0.772 - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
67. apc ENSDARG00000058868 2605 2.322 - - 0.727 - - 0.773 - - 0.822 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
68. slc35g2b ENSDARG00000045447 378 2.313 0.785 0.721 - - - 0.807 - - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
69. CU928222.1 ENSDARG00000097436 1662 2.297 0.820 0.704 - - - 0.773 - - -
70. elavl4 ENSDARG00000045639 998 2.289 - - 0.766 - 0.721 0.802 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
71. syt4 ENSDARG00000036505 421 2.274 0.716 0.800 - - - 0.758 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
72. epb41a ENSDARG00000099283 860 2.22 - 0.720 0.756 - - 0.744 - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
73. dbn1 ENSDARG00000069113 4527 2.193 0.738 - 0.733 - - 0.722 - - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
74. trappc1 ENSDARG00000039005 6990 1.978 - - - 0.982 - - 0.996 - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
75. tuba1c ENSDARG00000055216 8384 1.87 0.883 - - - - 0.987 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
76. gfap ENSDARG00000025301 5584 1.854 0.889 - - - - 0.965 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
77. vamp1 ENSDARG00000031283 3094 1.837 0.854 - - - - 0.983 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
78. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.814 0.848 - - - - 0.966 - - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
79. stmn2b ENSDARG00000070537 1586 1.812 0.839 - - - - 0.973 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
80. clstn3 ENSDARG00000073883 590 1.801 0.868 - - - - 0.933 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
81. slc32a1 ENSDARG00000059775 1092 1.799 0.828 - - - - 0.971 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
82. greb1 ENSDARG00000070794 1741 1.798 - 0.814 - 0.984 - - - - - growth regulating estrogen receptor binding 1 [Source:ZFIN;Acc:ZDB-GENE-070112-332]
83. vim ENSDARG00000010008 3551 1.798 0.876 - - - - 0.922 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
84. negr1 ENSDARG00000021607 1051 1.792 0.873 - - - - 0.919 - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
85. rtn1b ENSDARG00000021143 1682 1.791 - 0.831 - - - 0.960 - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
86. hes6 ENSDARG00000019335 4754 1.79 - - - - - 0.920 - - 0.870 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
87. JPH3 ENSDARG00000102204 283 1.786 0.858 - - - - 0.928 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
88. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.785 0.869 - - - - 0.916 - - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
89. hmp19 2554 1.781 0.869 - - - - 0.912 - - - HMP19 protein
90. nefma ENSDARG00000021351 790 1.778 0.834 - - - - 0.944 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
91. cadm3 ENSDARG00000057013 1545 1.777 - 0.799 - - - 0.978 - - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
92. plp1a ENSDARG00000103732 3544 1.775 0.881 - - - - 0.894 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
93. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.772 0.804 - - - - 0.968 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
94. SPOCK1 ENSDARG00000074644 794 1.769 0.836 - - - - 0.933 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
95. RAPGEF2 ENSDARG00000005482 2068 1.769 - 0.785 - 0.984 - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
96. slc1a3a ENSDARG00000104431 9888 1.768 0.793 - - - - 0.975 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
97. stxbp1a ENSDARG00000001994 5154 1.767 - 0.819 - - - 0.948 - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
98. atp6v0cb ENSDARG00000036577 3472 1.766 0.793 - - - - 0.973 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
99. dpysl3 ENSDARG00000002587 4381 1.766 0.811 - - - - 0.955 - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
100. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.76 0.846 - - - - 0.914 - - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]

There are 1453 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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