Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snapc3

Gene Name Gene ID Reads Annotation
snapc3 ENSDARG00000101474 367 small nuclear RNA activating complex, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-971]










Genes with expression patterns similar to snapc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snapc3 ENSDARG00000101474 367 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear RNA activating complex, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-971]
2. xkr8.3 ENSDARG00000039996 457 1.59 - 0.735 - - - - 0.855 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
3. ubxn2a ENSDARG00000087180 152 1.581 - 0.784 - - 0.797 - - - - UBX domain protein 2A [Source:ZFIN;Acc:ZDB-GENE-110411-202]
4. DAGLB ENSDARG00000089888 304 1.579 - - - - 0.798 - 0.781 - - diacylglycerol lipase, beta [Source:ZFIN;Acc:ZDB-GENE-070619-2]
5. sos1 ENSDARG00000100503 388 1.558 - - - - 0.764 0.794 - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
6. FAM35A FAM35A 1091 1.551 - - - - 0.822 0.729 - - -
7. smim12 ENSDARG00000070358 895 1.533 0.748 0.785 - - - - - - - small integral membrane protein 12 [Source:ZFIN;Acc:ZDB-GENE-050320-101]
8. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 1.531 - - - - 0.813 - 0.718 - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
9. polr1e ENSDARG00000006434, ENSDARG00000113920 770 1.524 - - - - 0.754 - 0.770 - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
10. adrbk2 1037 1.511 - - - 0.701 0.810 - - - - adrenergic, beta, receptor kinase 2, transcript variant X1
11. tenm1 ENSDARG00000003403 148 1.496 - 0.753 - - - - 0.743 - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
12. THOP1 ENSDARG00000013776 2717 1.491 - 0.700 - - - - 0.791 - - thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
13. ubp1 ENSDARG00000018000 1047 1.48 - - - - 0.742 - 0.738 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
14. CU633479.5 ENSDARG00000114818 1815 1.412 - 0.709 - - - - 0.703 - -
15. tal1 ENSDARG00000019930 523 0.888 - 0.888 - - - - - - - T-cell acute lymphocytic leukemia 1 [Source:ZFIN;Acc:ZDB-GENE-980526-501]
16. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 0.882 - 0.882 - - - - - - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
17. dpysl3 ENSDARG00000002587 4381 0.881 - 0.881 - - - - - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
18. clip2 ENSDARG00000059596 529 0.873 - - - - 0.873 - - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
19. ykt6 ENSDARG00000038308 473 0.87 - - - - - 0.870 - - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
20. KLHL33 ENSDARG00000105343 219 0.866 - - - - - - 0.866 - - kelch-like family member 33 [Source:ZFIN;Acc:ZDB-GENE-131016-4]
21. cep57l1 ENSDARG00000002826 521 0.866 - - - - 0.866 - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
22. wdr20b_1 ENSDARG00000041239 212 0.859 - - - - 0.859 - - - - WD repeat domain 20b [Source:ZFIN;Acc:ZDB-GENE-041014-234]
23. rmi1 ENSDARG00000041376 674 0.855 - - - - 0.855 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
24. si:dkey-102m7.3 ENSDARG00000100366 27 0.854 - - - - 0.854 - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
25. pigu ENSDARG00000075530 348 0.854 - 0.854 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
26. dlgap5 ENSDARG00000045167, ENSDARG00000109645 1466 0.854 - - - - - 0.854 - - - discs, large (Drosophila) homolog-associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-040912-160]
27. jarid2a ENSDARG00000060925 172 0.852 - - - - - 0.852 - - - jumonji, AT rich interactive domain 2a [Source:ZFIN;Acc:ZDB-GENE-061218-1]
28. smyd4 ENSDARG00000060983 106 0.851 - - - - 0.851 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
29. RBPMS ENSDARG00000099396 61 0.849 - - - - 0.849 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
30. CABZ01093075.1 ENSDARG00000086616 251 0.846 - 0.846 - - - - - - - cabz01093075.1 [Source:ZFIN;Acc:ZDB-GENE-160113-9]
31. rapgef5a ENSDARG00000075271 282 0.845 - - - - 0.845 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
32. CLINT1 CLINT1 558 0.844 - - - - - - 0.844 - -
33. map3k7cl ENSDARG00000069143 130 0.842 - - - - - - 0.842 - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
34. PKN2 ENSDARG00000101293 358 0.841 - - - - 0.841 - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
35. pax6l pax6l 54 0.841 - - - - 0.841 - - - -
36. nmd3 ENSDARG00000015676 303 0.841 - 0.841 - - - - - - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
37. GTPBP6 ENSDARG00000061091 29 0.84 - - - - 0.840 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
38. CU694256.1 ENSDARG00000097007 290 0.84 - - - - 0.840 - - - -
39. si:dkey-14d8.9 si:dkey-14d8.9 66 0.84 - - - - 0.840 - - - -
40. ddx26b 79 0.839 - - - - 0.839 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
41. wfikkn2b ENSDARG00000059139 45 0.839 - - - - 0.839 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
42. cep70 ENSDARG00000076965 140 0.839 - 0.839 - - - - - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
43. MAP4K2 ENSDARG00000001234 39 0.838 - - - - 0.838 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
44. gpr88 24 0.838 - - - - 0.838 - - - - G protein-coupled receptor 88
45. kcnc1a ENSDARG00000051852 317 0.837 - 0.837 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
46. dusp16 ENSDARG00000102474 193 0.837 - - - - 0.837 - - - - dual specificity phosphatase 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2360]
47. arpc5la ENSDARG00000041720 143 0.837 - - - - 0.837 - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
48. qtrtd1 243 0.835 - - - - 0.835 - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
49. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.835 - 0.835 - - - - - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
50. DTX3 DTX3 303 0.835 - - - - 0.835 - - - -
51. zgc:158852 ENSDARG00000102076 65 0.835 - - - - 0.835 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
52. shank2 ENSDARG00000062325 66 0.835 - - - - 0.835 - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
53. foxd1 ENSDARG00000029179 726 0.834 - - - - 0.834 - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
54. WIPF1 WIPF1 32 0.833 - - - - 0.833 - - - -
55. mir457b 21 0.833 - - - - 0.833 - - - - microRNA 457b
56. rlbp1a ENSDARG00000012504 111 0.831 - - - - 0.831 - - - - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
57. KHDRBS3 ENSDARG00000101020 408 0.831 - - - - 0.831 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
58. pggt1b ENSDARG00000103464 441 0.831 - - - - 0.831 - - - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
59. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.831 - - - - 0.831 - - - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
60. TMEM150A_1 TMEM150A_1 90 0.829 - - - - 0.829 - - - -
61. DMXL1 DMXL1 798 0.828 - - - - - 0.828 - - -
62. si:ch1073-174d20.2 ENSDARG00000079651 171 0.827 - 0.827 - - - - - - - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
63. nsmce4a ENSDARG00000024311 125 0.826 - - - - 0.826 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
64. CELF6 ENSDARG00000101933 228 0.826 - - - - 0.826 - - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
65. ANKRD50 ENSDARG00000045666 1756 0.825 - 0.825 - - - - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
66. reep3l reep3l 608 0.824 0.824 - - - - - - - -
67. CR450842.1 CR450842.1 129 0.824 - - - - 0.824 - - - -
68. PLXNB2 PLXNB2 99 0.822 - - - - 0.822 - - - -
69. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.822 - 0.822 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
70. rgs7 rgs7 208 0.821 - - - - - 0.821 - - -
71. AREL1 ENSDARG00000100359 260 0.821 - - - - 0.821 - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
72. tbc1d31 ENSDARG00000074623 94 0.821 - - - - 0.821 - - - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
73. sccpdhb ENSDARG00000024564 707 0.821 - - - - 0.821 - - - - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]
74. si:ch211-110p13.9 ENSDARG00000093821 82 0.82 - - - - 0.820 - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
75. slc16a6a ENSDARG00000102793 60 0.82 - - - - 0.820 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
76. C5H11orf1 C5H11orf1 78 0.82 - - - - 0.820 - - - -
77. enpp1 ENSDARG00000005789 3267 0.819 - - - - - - 0.819 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
78. GPN1 ENSDARG00000043928 566 0.819 - - - - 0.819 - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
79. ENSDARG00000023499 ENSDARG00000023499 395 0.818 - 0.818 - - - - - - -
80. sirt6 ENSDARG00000102963 766 0.818 - 0.818 - - - - - - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
81. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 0.818 - - - - - - 0.818 - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
82. si:ch73-44m9.2 ENSDARG00000094821 101 0.818 - - - - 0.818 - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
83. ptprga ENSDARG00000045006 719 0.817 - - - - - 0.817 - - - protein tyrosine phosphatase, receptor type, g a [Source:ZFIN;Acc:ZDB-GENE-101101-4]
84. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 0.816 - 0.816 - - - - - - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
85. pqbp1 ENSDARG00000029724 1472 0.815 - - - - - - 0.815 - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
86. nlgn3b ENSDARG00000062376 171 0.815 - - - - 0.815 - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
87. CABZ01072511.1 CABZ01072511.1 88 0.815 - - - - - 0.815 - - -
88. ccdc126 ENSDARG00000062695 861 0.815 - 0.815 - - - - - - - coiled-coil domain containing 126 [Source:ZFIN;Acc:ZDB-GENE-060503-11]
89. trappc13 ENSDARG00000033768 1311 0.815 - 0.815 - - - - - - - trafficking protein particle complex 13 [Source:ZFIN;Acc:ZDB-GENE-030131-9775]
90. SNCAIP ENSDARG00000100198 522 0.815 - - - - - 0.815 - - - synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71]
91. tssc1 tssc1 416 0.815 - 0.815 - - - - - - -
92. CU693494.3 CU693494.3 169 0.815 - - - - 0.815 - - - -
93. fam210a fam210a 348 0.814 - 0.814 - - - - - - -
94. si:dkey-119m17.2 509 0.814 - 0.814 - - - - - - - si:dkey-119m17.2, transcript variant X2
95. mak ENSDARG00000059287 144 0.813 - - - - 0.813 - - - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
96. zgc:173709 86 0.813 - - - - 0.813 - - - - zgc:173709
97. fgfbp1 fgfbp1 445 0.813 - 0.813 - - - - - - -
98. mafb ENSDARG00000076520 139 0.812 - - - - 0.812 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog b (paralog b) [Source:ZFIN;Acc:ZDB-GENE-141211-38]
99. lft2 ENSDARG00000044059 46 0.812 - - - - 0.812 - - - - lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
100. CABZ01003826.1 CABZ01003826.1 486 0.811 - - - - - - 0.811 - -

There are 573 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA